RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 GABRPO00591 440 aa20.82■□□□□ 0.92
ATPAF1-213ENST00000574428 RGS9O75916 674 aaPredicted RBP20.82■□□□□ 0.92
ATPAF1-213ENST00000574428 UBCP0CG48 685 aaKnown RBP20.82■□□□□ 0.92
ATPAF1-213ENST00000574428 MAGEB1P43366 347 aa20.82■□□□□ 0.92
ATPAF1-213ENST00000574428 TIMM50Q3ZCQ8 353 aa20.82■□□□□ 0.92
ATPAF1-213ENST00000574428 YIF1BQ5BJH7 314 aa20.82■□□□□ 0.92
ATPAF1-213ENST00000574428 CD200R1LQ6Q8B3 271 aa20.82■□□□□ 0.92
ATPAF1-213ENST00000574428 ZNF704Q6ZNC4 412 aaPredicted RBP20.82■□□□□ 0.92
ATPAF1-213ENST00000574428 TMEM91Q6ZNR0 172 aa20.82■□□□□ 0.92
ATPAF1-213ENST00000574428 OR51E1Q8TCB6 317 aa20.82■□□□□ 0.92
ATPAF1-213ENST00000574428 ZC3HAV1LQ96H79 300 aaKnown RBP20.82■□□□□ 0.92
ATPAF1-213ENST00000574428 DCSTAMPQ9H295 470 aa20.82■□□□□ 0.92
ATPAF1-213ENST00000574428 RNF167Q9H6Y7 350 aa20.82■□□□□ 0.92
ATPAF1-213ENST00000574428 LOC107986453A0A1B0GWG9 222 aa20.82■□□□□ 0.92
ATPAF1-213ENST00000574428 HLA-DPB1P04440 258 aa20.82■□□□□ 0.92
ATPAF1-213ENST00000574428 WNT5AP41221 380 aa20.82■□□□□ 0.92
ATPAF1-213ENST00000574428 SNTB1Q13884 538 aaKnown RBP20.82■□□□□ 0.92
ATPAF1-213ENST00000574428 TRAM1Q15629 374 aa20.82■□□□□ 0.92
ATPAF1-213ENST00000574428 SEZ6L2Q6UXD5 910 aa20.82■□□□□ 0.92
ATPAF1-213ENST00000574428 COMMD2Q86X83 199 aa20.82■□□□□ 0.92
ATPAF1-213ENST00000574428 FAM169BQ8N8A8 192 aa20.82■□□□□ 0.92
ATPAF1-213ENST00000574428 OR14A2Q96R54 314 aa20.82■□□□□ 0.92
ATPAF1-213ENST00000574428 C1QTNF5Q9BXJ0 243 aa20.82■□□□□ 0.92
ATPAF1-213ENST00000574428 OR10A4Q9H209 315 aa20.82■□□□□ 0.92
ATPAF1-213ENST00000574428 CDH20Q9HBT6 801 aa20.82■□□□□ 0.92
ATPAF1-213ENST00000574428 SSR3Q9UNL2 185 aa20.82■□□□□ 0.92
ATPAF1-213ENST00000574428 M0R1B8 84 aa20.81■□□□□ 0.92
ATPAF1-213ENST00000574428 C22orf42Q6IC83 251 aa20.81■□□□□ 0.92
ATPAF1-213ENST00000574428 USP43Q70EL4 1123 aa20.81■□□□□ 0.92
ATPAF1-213ENST00000574428 OR52H1Q8NGJ2 320 aa20.81■□□□□ 0.92
ATPAF1-213ENST00000574428 OR10A2Q9H208 303 aa20.81■□□□□ 0.92
ATPAF1-213ENST00000574428 TRDV1A0A1B0GX56 115 aa20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 ISG15P05161 165 aa20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 THBDP07204 575 aa20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 DGUOKQ16854 277 aa20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 ACSM3Q53FZ2 586 aa20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 COLCA1Q6ZS62 124 aa20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 WFDC8Q8IUA0 241 aa20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 ZNF101Q8IZC7 436 aa20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 OR2AE1Q8NHA4 323 aa20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 LRRC46Q96FV0 321 aa20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 WFIKKN1Q96NZ8 548 aa20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 SOX7Q9BT81 388 aa20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 OR51B6Q9H340 312 aa20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 MOV10Q9HCE1 1003 aaKnown RBP20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 GPR84Q9NQS5 396 aa20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 TXNL4BQ9NX01 149 aaKnown RBP20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 PMF1-BGLAPU3KQ54 211 aa20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 PRR14LQ5THK1 2151 aa20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 A0A1B0GTI1 187 aa20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 SC5DO75845 299 aa20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 NGFP01138 241 aa20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 SOX2P48431 317 aa20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 TFF3Q07654 80 aa20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 FAM27D1Q5T7N8 215 aa20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 TMEM244Q5VVB8 128 aa20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 XKRXQ6PP77 449 aa20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 CEACAM19Q7Z692 300 aa20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 KBTBD8Q8NFY9 601 aa20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 OR1J2Q8NGS2 313 aa20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 GPR148Q8TDV2 347 aa20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 TSEN15Q8WW01 171 aaKnown RBP20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 LYZL4Q96KX0 146 aa20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 MED18Q9BUE0 208 aa20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 SP140LQ9H930 580 aa20.8■□□□□ 0.92
ATPAF1-213ENST00000574428 FAM208BQ5VWN6 2430 aa20.79■□□□□ 0.92
ATPAF1-213ENST00000574428 CLDN14O95500 239 aa20.79■□□□□ 0.92
ATPAF1-213ENST00000574428 SERPINA3P01011 423 aa20.79■□□□□ 0.92
ATPAF1-213ENST00000574428 OCM2P0CE71 109 aa20.79■□□□□ 0.92
ATPAF1-213ENST00000574428 AGAP20933 346 aa20.79■□□□□ 0.92
ATPAF1-213ENST00000574428 ACHEP22303 614 aa20.79■□□□□ 0.92
ATPAF1-213ENST00000574428 GLYATL3Q5SZD4 288 aa20.79■□□□□ 0.92
ATPAF1-213ENST00000574428 C1QTNF12Q5T7M4 302 aa20.79■□□□□ 0.92
ATPAF1-213ENST00000574428 RFPL4BQ6ZWI9 263 aa20.79■□□□□ 0.92
ATPAF1-213ENST00000574428 ZNF808Q8N4W9 903 aaPredicted RBP20.79■□□□□ 0.92
ATPAF1-213ENST00000574428 SGK3Q96BR1 496 aa20.79■□□□□ 0.92
ATPAF1-213ENST00000574428 FAM71F1Q96KD3 344 aaPredicted RBP20.79■□□□□ 0.92
ATPAF1-213ENST00000574428 KCNS3Q9BQ31 491 aa20.79■□□□□ 0.92
ATPAF1-213ENST00000574428 HHLA2Q9UM44 414 aa20.79■□□□□ 0.92
ATPAF1-213ENST00000574428 TRBV5-5A0A0J9YX44 114 aa20.78■□□□□ 0.92
ATPAF1-213ENST00000574428 A0A0U1RQV5 110 aa20.78■□□□□ 0.92
ATPAF1-213ENST00000574428 A0A1W2PPK0 400 aa20.78■□□□□ 0.92
ATPAF1-213ENST00000574428 SYT7O43581 403 aa20.78■□□□□ 0.92
ATPAF1-213ENST00000574428 INHBBP09529 407 aa20.78■□□□□ 0.92
ATPAF1-213ENST00000574428 PPP3CBP16298 524 aa20.78■□□□□ 0.92
ATPAF1-213ENST00000574428 ZMAT1Q5H9K5 638 aa20.78■□□□□ 0.92
ATPAF1-213ENST00000574428 APOBEC3DQ96AK3 386 aaPredicted RBP20.78■□□□□ 0.92
ATPAF1-213ENST00000574428 PPIL3Q9H2H8 161 aaKnown RBP20.78■□□□□ 0.92
ATPAF1-213ENST00000574428 A0A1B0GVI7 797 aa20.77■□□□□ 0.92
ATPAF1-213ENST00000574428 ZNF879B4DU55 563 aa20.77■□□□□ 0.92
ATPAF1-213ENST00000574428 LMX1BO60663 402 aa20.77■□□□□ 0.92
ATPAF1-213ENST00000574428 Q499Y3 187 aa20.77■□□□□ 0.92
ATPAF1-213ENST00000574428 GDPGP1Q6ZNW5 385 aa20.77■□□□□ 0.92
ATPAF1-213ENST00000574428 REEP6Q96HR9 211 aa20.77■□□□□ 0.92
ATPAF1-213ENST00000574428 SLIRPQ9GZT3 109 aaKnown RBP20.77■□□□□ 0.92
ATPAF1-213ENST00000574428 STARD10Q9Y365 291 aa20.77■□□□□ 0.92
ATPAF1-213ENST00000574428 IGHV2OR16-5A0A0B4J2B6 119 aa20.77■□□□□ 0.91
ATPAF1-213ENST00000574428 IGLV3-1P01715 115 aa20.77■□□□□ 0.91
ATPAF1-213ENST00000574428 FAM157BP0CG42 384 aa20.77■□□□□ 0.91
ATPAF1-213ENST00000574428 ZNF35P13682 527 aa20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms