RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 WIPI2Q9Y4P8 454 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 LHFPL6Q9Y693 200 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 CACNG2Q9Y698 323 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 CDH10Q9Y6N8 788 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 U3KQV3 271 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 MALRD1Q5VYJ5 2156 aa6.3□□□□□ -1.4
NUP88-205ENST00000572809 F5H5K5 113 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 ACOT8O14734 319 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 SCGB1D2O95969 90 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 CST1P01037 141 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 CD55P08174 381 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 RAP2AP10114 183 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 FAHP16930 419 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 TNFRSF1AP19438 455 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 PCMT1P22061 227 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 TNFSF4P23510 183 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 ECH1Q13011 328 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 RSPO1Q2MKA7 263 aaPredicted RBP6.29□□□□□ -1.4
NUP88-205ENST00000572809 SPRNQ5BIV9 151 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 ZNF362Q5T0B9 420 aaPredicted RBP6.29□□□□□ -1.4
NUP88-205ENST00000572809 SLC18B1Q6NT16 456 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 ACSM5Q6NUN0 579 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 CXXC5Q7LFL8 322 aaKnown RBP6.29□□□□□ -1.4
NUP88-205ENST00000572809 TRPM8Q7Z2W7 1104 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 PEG10Q86TG7 708 aaKnown RBP6.29□□□□□ -1.4
NUP88-205ENST00000572809 GLCCI1Q86VQ1 547 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 LINC00346Q8IVM7 164 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 CYB561A3Q8NBI2 242 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 AQP11Q8NBQ7 271 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 OR2Z1Q8NG97 314 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 OR2T4Q8NH00 348 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 OR51F2Q8NH61 342 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 SPATA3Q8NHX4 192 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 BCAS4Q8TDM0 211 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 TMEM158Q8WZ71 300 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 APOBEC3DQ96AK3 386 aaPredicted RBP6.29□□□□□ -1.4
NUP88-205ENST00000572809 TMEM186Q96B77 213 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 CLPTM1LQ96KA5 538 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 PITX2Q99697 317 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 CHID1Q9BWS9 393 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 DGCR6LQ9BY27 220 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 PLA2G12AQ9BZM1 189 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 FN3KQ9H479 309 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 ZNF665Q9H7R5 613 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 LPAR2Q9HBW0 351 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 HIF1ANQ9NWT6 349 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 VNN3Q9NY84 501 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 PTTG3PQ9NZH4 202 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 IL19Q9UHD0 177 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 CYB5R1Q9UHQ9 305 aa6.29□□□□□ -1.4
NUP88-205ENST00000572809 SAMHD1Q9Y3Z3 626 aaKnown RBP6.29□□□□□ -1.4
NUP88-205ENST00000572809 AQP12BA6NM10 295 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 RNF212BA8MTL3 300 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 GNGT2O14610 69 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 SURF4O15260 269 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 GYG2O15488 501 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 PHF1O43189 567 aaPredicted RBP6.28□□□□□ -1.4
NUP88-205ENST00000572809 MSMBP08118 114 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 PYCR1P32322 319 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 GGT2P36268 569 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 SRP14P37108 136 aaKnown RBP6.28□□□□□ -1.4
NUP88-205ENST00000572809 TPTEP56180 551 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 GK3PQ14409 553 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 HLXQ14774 488 aaPredicted RBP6.28□□□□□ -1.4
NUP88-205ENST00000572809 PDCD1Q15116 288 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 OR2T2Q6IF00 324 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 SLC27A4Q6P1M0 643 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 FAHD2BQ6P2I3 314 aaPredicted RBP6.28□□□□□ -1.4
NUP88-205ENST00000572809 FBXW12Q6X9E4 464 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 CFAP77Q6ZQR2 320 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 Q6ZR03 302 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 COLCA1Q6ZS62 124 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 NAA40Q86UY6 237 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 AQP12AQ8IXF9 295 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 OR5AS1Q8N127 324 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 LNX2Q8N448 690 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 ATG16L2Q8NAA4 619 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 SLC37A3Q8NCC5 494 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 PROKR2Q8NFJ6 384 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 OR2T33Q8NG76 320 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 OR8G5Q8NG78 346 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 OR51L1Q8NGJ5 315 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 OR8D4Q8NGM9 314 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 OR13G1Q8NGZ3 307 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 GIPC3Q8TF64 312 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 CANT1Q8WVQ1 401 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 ZNRF4Q8WWF5 429 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 CCDC124Q96CT7 223 aaKnown RBP6.28□□□□□ -1.4
NUP88-205ENST00000572809 RAB39BQ96DA2 213 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 FAHD2AQ96GK7 314 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 KIRREL1Q96J84 757 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 ZNF582Q96NG8 517 aaPredicted RBP6.28□□□□□ -1.4
NUP88-205ENST00000572809 ATF6BQ99941 703 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 C1QTNF5Q9BXJ0 243 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 TMEM106BQ9NUM4 274 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 TBC1D23Q9NUY8 699 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 MRPL22Q9NWU5 206 aaKnown RBP6.28□□□□□ -1.4
NUP88-205ENST00000572809 KCNG2Q9UJ96 466 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 BAIAP2Q9UQB8 552 aa6.28□□□□□ -1.4
NUP88-205ENST00000572809 NPTNQ9Y639 398 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms