RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 E9PI62 339 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 DOK2O60496 412 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 INMTO95050 263 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 SOD3P08294 240 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 ZNF14P17017 642 aaPredicted RBP11.86□□□□□ -0.51
RPAIN-209ENST00000571558 DCTDP32321 178 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 ALDH3B2P48448 385 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 GP2P55259 537 aaKnown RBP11.86□□□□□ -0.51
RPAIN-209ENST00000571558 DSCR9P59020 149 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 NEDD8Q15843 81 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 SYT6Q5T7P8 510 aaPredicted RBP11.86□□□□□ -0.51
RPAIN-209ENST00000571558 TMEM53Q6P2H8 277 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 SEZ6L2Q6UXD5 910 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 ZNF367Q7RTV3 350 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 KRT77Q7Z794 578 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 WFDC8Q8IUA0 241 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 OR1F12Q8NHA8 337 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 MYCBPQ99417 103 aaPredicted RBP11.86□□□□□ -0.51
RPAIN-209ENST00000571558 COQ7Q99807 217 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 MROQ9BYG7 248 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 ACTR6Q9GZN1 396 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 CENPMQ9NSP4 180 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 PLEK2Q9NYT0 353 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 IKZF2Q9UKS7 526 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 FBXL3Q9UKT7 428 aa11.86□□□□□ -0.51
RPAIN-209ENST00000571558 CR1P17927 2039 aa11.85□□□□□ -0.51
RPAIN-209ENST00000571558 LOC100509620A0A075B734 347 aa11.85□□□□□ -0.51
RPAIN-209ENST00000571558 A0A1W2PR80 420 aa11.85□□□□□ -0.51
RPAIN-209ENST00000571558 PNPP00491 289 aa11.85□□□□□ -0.51
RPAIN-209ENST00000571558 IGKV3-15P01624 115 aa11.85□□□□□ -0.51
RPAIN-209ENST00000571558 IGHV4-39P01824 125 aa11.85□□□□□ -0.51
RPAIN-209ENST00000571558 TACSTD2P09758 323 aa11.85□□□□□ -0.51
RPAIN-209ENST00000571558 H2BFMP0C1H6 154 aa11.85□□□□□ -0.51
RPAIN-209ENST00000571558 COX5BP10606 129 aa11.85□□□□□ -0.51
RPAIN-209ENST00000571558 CBR1P16152 277 aa11.85□□□□□ -0.51
RPAIN-209ENST00000571558 CAPZA2P47755 286 aa11.85□□□□□ -0.51
RPAIN-209ENST00000571558 UBE2NP61088 152 aaKnown RBP11.85□□□□□ -0.51
RPAIN-209ENST00000571558 BDH1Q02338 343 aa11.85□□□□□ -0.51
RPAIN-209ENST00000571558 ECH1Q13011 328 aa11.85□□□□□ -0.51
RPAIN-209ENST00000571558 MED22Q15528 200 aa11.85□□□□□ -0.51
RPAIN-209ENST00000571558 FDX2Q6P4F2 183 aa11.85□□□□□ -0.51
RPAIN-209ENST00000571558 KLBQ86Z14 1044 aa11.85□□□□□ -0.51
RPAIN-209ENST00000571558 FAM169BQ8N8A8 192 aa11.85□□□□□ -0.51
RPAIN-209ENST00000571558 YIPF7Q8N8F6 280 aa11.85□□□□□ -0.51
RPAIN-209ENST00000571558 LILRB1Q8NHL6 650 aaPredicted RBP11.85□□□□□ -0.51
RPAIN-209ENST00000571558 HSD17B8Q92506 261 aa11.85□□□□□ -0.51
RPAIN-209ENST00000571558 SLC7A6Q92536 515 aa11.85□□□□□ -0.51
RPAIN-209ENST00000571558 RORBQ92753 470 aa11.85□□□□□ -0.51
RPAIN-209ENST00000571558 OPALINQ96PE5 141 aa11.85□□□□□ -0.51
RPAIN-209ENST00000571558 RNF121Q9H920 327 aa11.85□□□□□ -0.51
RPAIN-209ENST00000571558 ISYNA1Q9NPH2 558 aa11.85□□□□□ -0.51
RPAIN-209ENST00000571558 FAIMQ9NVQ4 179 aa11.85□□□□□ -0.51
RPAIN-209ENST00000571558 CRNNQ9UBG3 495 aaPredicted RBP11.85□□□□□ -0.51
RPAIN-209ENST00000571558 GRIP1Q9Y3R0 1128 aa11.85□□□□□ -0.51
RPAIN-209ENST00000571558 SIRT4Q9Y6E7 314 aaPredicted RBP11.85□□□□□ -0.51
RPAIN-209ENST00000571558 IGLV1-44P01699 117 aa11.84□□□□□ -0.51
RPAIN-209ENST00000571558 SERPINA5P05154 406 aa11.84□□□□□ -0.51
RPAIN-209ENST00000571558 CD3EP07766 207 aa11.84□□□□□ -0.51
RPAIN-209ENST00000571558 DBHP09172 617 aa11.84□□□□□ -0.51
RPAIN-209ENST00000571558 PSMB10P40306 273 aa11.84□□□□□ -0.51
RPAIN-209ENST00000571558 HTR5AP47898 357 aa11.84□□□□□ -0.51
RPAIN-209ENST00000571558 GTF2A1P52655 376 aaPredicted RBP11.84□□□□□ -0.51
RPAIN-209ENST00000571558 RIDAP52758 137 aaKnown RBP11.84□□□□□ -0.51
RPAIN-209ENST00000571558 NANOS3P60323 173 aaKnown RBP11.84□□□□□ -0.51
RPAIN-209ENST00000571558 GRB2P62993 217 aaKnown RBP11.84□□□□□ -0.51
RPAIN-209ENST00000571558 HGFACQ04756 655 aa11.84□□□□□ -0.51
RPAIN-209ENST00000571558 LOXL1Q08397 574 aaPredicted RBP11.84□□□□□ -0.51
RPAIN-209ENST00000571558 BLMHQ13867 455 aa11.84□□□□□ -0.51
RPAIN-209ENST00000571558 RAB39AQ14964 217 aa11.84□□□□□ -0.51
RPAIN-209ENST00000571558 TAB1Q15750 504 aa11.84□□□□□ -0.51
RPAIN-209ENST00000571558 TMEM249Q2WGJ8 235 aa11.84□□□□□ -0.51
RPAIN-209ENST00000571558 NCMAPQ5T1S8 102 aa11.84□□□□□ -0.51
RPAIN-209ENST00000571558 PRSS45Q7RTY3 260 aa11.84□□□□□ -0.51
RPAIN-209ENST00000571558 FAM220AQ7Z4H9 259 aa11.84□□□□□ -0.51
RPAIN-209ENST00000571558 MYPOPQ86VE0 399 aaPredicted RBP11.84□□□□□ -0.51
RPAIN-209ENST00000571558 RPS4Y2Q8TD47 263 aa11.84□□□□□ -0.51
RPAIN-209ENST00000571558 MGLLQ99685 303 aa11.84□□□□□ -0.51
RPAIN-209ENST00000571558 KCNJ15Q99712 375 aa11.84□□□□□ -0.51
RPAIN-209ENST00000571558 SHARPINQ9H0F6 387 aa11.84□□□□□ -0.51
RPAIN-209ENST00000571558 NIPAL2Q9H841 368 aa11.84□□□□□ -0.51
RPAIN-209ENST00000571558 FAM206AQ9NX38 181 aa11.84□□□□□ -0.51
RPAIN-209ENST00000571558 OGG1O15527 345 aa11.83□□□□□ -0.52
RPAIN-209ENST00000571558 ANOS1P23352 680 aa11.83□□□□□ -0.52
RPAIN-209ENST00000571558 APEX1P27695 318 aaKnown RBP11.83□□□□□ -0.52
RPAIN-209ENST00000571558 CDKN1AP38936 164 aa11.83□□□□□ -0.52
RPAIN-209ENST00000571558 TGM4P49221 684 aa11.83□□□□□ -0.52
RPAIN-209ENST00000571558 MMP16P51512 607 aa11.83□□□□□ -0.52
RPAIN-209ENST00000571558 GBX2P52951 348 aaPredicted RBP11.83□□□□□ -0.52
RPAIN-209ENST00000571558 PSMA6P60900 246 aaKnown RBP11.83□□□□□ -0.52
RPAIN-209ENST00000571558 MFGE8Q08431 387 aaPredicted RBP11.83□□□□□ -0.52
RPAIN-209ENST00000571558 MLLT11Q13015 90 aaPredicted RBP11.83□□□□□ -0.52
RPAIN-209ENST00000571558 MRPL28Q13084 256 aaKnown RBP11.83□□□□□ -0.52
RPAIN-209ENST00000571558 TPBGQ13641 420 aa11.83□□□□□ -0.52
RPAIN-209ENST00000571558 TIGD6Q17RP2 521 aa11.83□□□□□ -0.52
RPAIN-209ENST00000571558 ZNF672Q499Z4 452 aaPredicted RBP11.83□□□□□ -0.52
RPAIN-209ENST00000571558 CCDC58Q4VC31 144 aa11.83□□□□□ -0.52
RPAIN-209ENST00000571558 DMKNQ6E0U4 476 aaPredicted RBP11.83□□□□□ -0.52
RPAIN-209ENST00000571558 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.83□□□□□ -0.52
RPAIN-209ENST00000571558 ALDH16A1Q8IZ83 802 aa11.83□□□□□ -0.52
RPAIN-209ENST00000571558 IL17RDQ8NFM7 739 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms