RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 OR11G2Q8NGC1 345 aa5.93□□□□□ -1.46
SMG1-217ENST00000569764 TMEM56Q96MV1 263 aa5.93□□□□□ -1.46
SMG1-217ENST00000569764 DDOQ99489 341 aa5.93□□□□□ -1.46
SMG1-217ENST00000569764 VKORC1Q9BQB6 163 aa5.93□□□□□ -1.46
SMG1-217ENST00000569764 ANKRD19PQ9H560 264 aa5.93□□□□□ -1.46
SMG1-217ENST00000569764 HRASLSQ9HDD0 168 aa5.93□□□□□ -1.46
SMG1-217ENST00000569764 DNAJB12Q9NXW2 375 aaKnown RBP5.93□□□□□ -1.46
SMG1-217ENST00000569764 CCDC167Q9P0B6 97 aa5.93□□□□□ -1.46
SMG1-217ENST00000569764 METRNQ9UJH8 293 aa5.93□□□□□ -1.46
SMG1-217ENST00000569764 ADAM29Q9UKF5 820 aa5.93□□□□□ -1.46
SMG1-217ENST00000569764 ZNF346Q9UL40 294 aaKnown RBP5.93□□□□□ -1.46
SMG1-217ENST00000569764 PRPF19Q9UMS4 504 aaKnown RBP5.93□□□□□ -1.46
SMG1-217ENST00000569764 FOXJ3Q9UPW0 622 aa5.93□□□□□ -1.46
SMG1-217ENST00000569764 POMPQ9Y244 141 aa5.93□□□□□ -1.46
SMG1-217ENST00000569764 TMEM56-RWDD3S4R434 201 aa5.93□□□□□ -1.46
SMG1-217ENST00000569764 A1L4Q6 167 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 PRKYO43930 277 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 CST4P01036 141 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 RLN2P04090 185 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 TFAP2AP05549 437 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 IL1RNP18510 177 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 GPX3P22352 226 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 HTR2CP28335 458 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 CD200P41217 278 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 SLC6A8P48029 635 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 DSCR9P59020 149 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 TBPL1P62380 186 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 ID2Q02363 134 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 GAGE1Q13065 139 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 SRSF6Q13247 344 aaKnown RBP5.92□□□□□ -1.46
SMG1-217ENST00000569764 TGIF1Q15583 401 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 Q6ZSR9 355 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 IGFN1Q86VF2 1251 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 IFNEQ86WN2 208 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 ZNF547Q8IVP9 402 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 PLPP5Q8NEB5 264 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 FAM71CQ8NEG0 241 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 ABHD11Q8NFV4 315 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 TSPAN14Q8NG11 270 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 OR52L2PQ8NGH6 319 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 TCTEX1D2Q8WW35 142 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 ZNF582Q96NG8 517 aaPredicted RBP5.92□□□□□ -1.46
SMG1-217ENST00000569764 ERVK13-1Q9NX77 482 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 ING4Q9UNL4 249 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 CNTRLQ7Z7A1 2325 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 TEX22C9J3V5 150 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 FCN3O75636 299 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 C1orf105O95561 183 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 IFNGP01579 166 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 PPBPP02775 128 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 MATN1P21941 496 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 GLP1RP43220 463 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 NPBWR1P48145 328 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 SOX2P48431 317 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 GSK3BP49841 420 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 NUDT2P50583 147 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 SMIM21Q3B7S5 101 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 CCSMST1Q4G0I0 132 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 NECAP1Q8NC96 275 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 ARHGDIGQ99819 225 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 ABHD6Q9BV23 337 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 MAP1LC3CQ9BXW4 147 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 TMEM27Q9HBJ8 222 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 CDH10Q9Y6N8 788 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 V9GYY9 64 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 DENND4AQ7Z401 1863 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 TVP23AA6NH52 213 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 F2RL2O00254 374 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 WIPF1O43516 503 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 ETHE1O95571 254 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 IFNA10P01566 189 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 C8BP07358 591 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 PVRP15151 417 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 SRSF1Q07955 248 aaKnown RBP eCLIP5.92□□□□□ -1.46
SMG1-217ENST00000569764 KLHDC8AQ8IYD2 350 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 CCDC71LQ8N9Z2 235 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 COQ8AQ8NI60 647 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 TWIST2Q8WVJ9 160 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 SLC25A28Q96A46 364 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 SCARF2Q96GP6 870 aaPredicted RBP5.92□□□□□ -1.46
SMG1-217ENST00000569764 SFRP2Q96HF1 295 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 MTERF1Q99551 399 aaKnown RBP5.92□□□□□ -1.46
SMG1-217ENST00000569764 RHNO1Q9BSD3 238 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 ARV1Q9H2C2 271 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 MRPS18AQ9NVS2 196 aaKnown RBP5.92□□□□□ -1.46
SMG1-217ENST00000569764 LRP12Q9Y561 859 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 E7ENX8 843 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 RDH16O75452 317 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 ATG12O94817 140 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 SOD1P00441 154 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 IFNW1P05000 195 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 C2orf80Q0P641 193 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 GK2Q14410 553 aaPredicted RBP5.92□□□□□ -1.46
SMG1-217ENST00000569764 C8orf82Q6P1X6 216 aaPredicted RBP5.92□□□□□ -1.46
SMG1-217ENST00000569764 ATRAIDQ6UW56 229 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 B3GNT8Q7Z7M8 397 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 ATG4DQ86TL0 474 aaPredicted RBP5.92□□□□□ -1.46
SMG1-217ENST00000569764 GNPDA2Q8TDQ7 276 aa5.92□□□□□ -1.46
SMG1-217ENST00000569764 ANKRD9Q96BM1 317 aaPredicted RBP5.92□□□□□ -1.46
SMG1-217ENST00000569764 C12orf43Q96C57 262 aaKnown RBP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms