RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 GPR160Q9UJ42 338 aa20.2■□□□□ 0.82
RAB40C-212ENST00000569575 STARD10Q9Y365 291 aa20.2■□□□□ 0.82
RAB40C-212ENST00000569575 LOC390937A0A1W2PQ73 354 aa20.19■□□□□ 0.82
RAB40C-212ENST00000569575 TMEM212A6NML5 194 aa20.19■□□□□ 0.82
RAB40C-212ENST00000569575 HS3ST1O14792 307 aa20.19■□□□□ 0.82
RAB40C-212ENST00000569575 MAGEB4O15481 346 aaPredicted RBP20.19■□□□□ 0.82
RAB40C-212ENST00000569575 OGG1O15527 345 aa20.19■□□□□ 0.82
RAB40C-212ENST00000569575 MTRF1O75570 445 aaKnown RBP20.19■□□□□ 0.82
RAB40C-212ENST00000569575 PNPP00491 289 aa20.19■□□□□ 0.82
RAB40C-212ENST00000569575 NGFP01138 241 aa20.19■□□□□ 0.82
RAB40C-212ENST00000569575 ISG15P05161 165 aa20.19■□□□□ 0.82
RAB40C-212ENST00000569575 LIPAP38571 399 aa20.19■□□□□ 0.82
RAB40C-212ENST00000569575 SPOCK1Q08629 439 aa20.19■□□□□ 0.82
RAB40C-212ENST00000569575 TIGD6Q17RP2 521 aa20.19■□□□□ 0.82
RAB40C-212ENST00000569575 TMEM244Q5VVB8 128 aa20.19■□□□□ 0.82
RAB40C-212ENST00000569575 RFPL4BQ6ZWI9 263 aa20.19■□□□□ 0.82
RAB40C-212ENST00000569575 ZNF367Q7RTV3 350 aa20.19■□□□□ 0.82
RAB40C-212ENST00000569575 NAA40Q86UY6 237 aa20.19■□□□□ 0.82
RAB40C-212ENST00000569575 KBTBD8Q8NFY9 601 aa20.19■□□□□ 0.82
RAB40C-212ENST00000569575 TSPAN14Q8NG11 270 aa20.19■□□□□ 0.82
RAB40C-212ENST00000569575 GATAD2BQ8WXI9 593 aa20.19■□□□□ 0.82
RAB40C-212ENST00000569575 FBXW5Q969U6 566 aa20.19■□□□□ 0.82
RAB40C-212ENST00000569575 HS3ST6Q96QI5 342 aa20.19■□□□□ 0.82
RAB40C-212ENST00000569575 REPIN1Q9BWE0 567 aaKnown RBP20.19■□□□□ 0.82
RAB40C-212ENST00000569575 ACOT13Q9NPJ3 140 aa20.19■□□□□ 0.82
RAB40C-212ENST00000569575 EDARQ9UNE0 448 aa20.19■□□□□ 0.82
RAB40C-212ENST00000569575 LSM2Q9Y333 95 aaKnown RBP20.19■□□□□ 0.82
RAB40C-212ENST00000569575 PLCE1Q9P212 2302 aa20.19■□□□□ 0.82
RAB40C-212ENST00000569575 DHRS7CA6NNS2 312 aa20.18■□□□□ 0.82
RAB40C-212ENST00000569575 CD53P19397 219 aa20.18■□□□□ 0.82
RAB40C-212ENST00000569575 EMX1Q04741 257 aaPredicted RBP20.18■□□□□ 0.82
RAB40C-212ENST00000569575 EFNB3Q15768 340 aa20.18■□□□□ 0.82
RAB40C-212ENST00000569575 ZNF611Q8N823 705 aa20.18■□□□□ 0.82
RAB40C-212ENST00000569575 SYNPRQ8TBG9 265 aa20.18■□□□□ 0.82
RAB40C-212ENST00000569575 SLC25A40Q8TBP6 338 aa20.18■□□□□ 0.82
RAB40C-212ENST00000569575 RPS4Y2Q8TD47 263 aa20.18■□□□□ 0.82
RAB40C-212ENST00000569575 SGCDQ92629 289 aa20.18■□□□□ 0.82
RAB40C-212ENST00000569575 HAVCR1Q96D42 359 aa20.18■□□□□ 0.82
RAB40C-212ENST00000569575 COMMD4Q9H0A8 199 aa20.18■□□□□ 0.82
RAB40C-212ENST00000569575 CLEC4MQ9H2X3 399 aaPredicted RBP20.18■□□□□ 0.82
RAB40C-212ENST00000569575 IGLV3-9A0A075B6K5 115 aa20.17■□□□□ 0.82
RAB40C-212ENST00000569575 MAGEA13PA6NCF6 341 aa20.17■□□□□ 0.82
RAB40C-212ENST00000569575 E7EQL1 145 aa20.17■□□□□ 0.82
RAB40C-212ENST00000569575 TBX1O43435 398 aa20.17■□□□□ 0.82
RAB40C-212ENST00000569575 GPRIN2O60269 458 aa20.17■□□□□ 0.82
RAB40C-212ENST00000569575 IGLV3-1P01715 115 aa20.17■□□□□ 0.82
RAB40C-212ENST00000569575 BMP4P12644 408 aa20.17■□□□□ 0.82
RAB40C-212ENST00000569575 THBS4P35443 961 aa20.17■□□□□ 0.82
RAB40C-212ENST00000569575 SERPINF1P36955 418 aa20.17■□□□□ 0.82
RAB40C-212ENST00000569575 MED22Q15528 200 aa20.17■□□□□ 0.82
RAB40C-212ENST00000569575 SNAI3Q3KNW1 292 aa20.17■□□□□ 0.82
RAB40C-212ENST00000569575 C20orf204Q6ZNR8 217 aa20.17■□□□□ 0.82
RAB40C-212ENST00000569575 Q6ZSR3 168 aa20.17■□□□□ 0.82
RAB40C-212ENST00000569575 PGAP1Q75T13 922 aa20.17■□□□□ 0.82
RAB40C-212ENST00000569575 MRPL21Q7Z2W9 205 aaKnown RBP20.17■□□□□ 0.82
RAB40C-212ENST00000569575 KLBQ86Z14 1044 aa20.17■□□□□ 0.82
RAB40C-212ENST00000569575 ZNF295-AS1Q8N0V1 137 aa20.17■□□□□ 0.82
RAB40C-212ENST00000569575 FTMTQ8N4E7 242 aa20.17■□□□□ 0.82
RAB40C-212ENST00000569575 OR8B12Q8NGG6 310 aa20.17■□□□□ 0.82
RAB40C-212ENST00000569575 LILRB1Q8NHL6 650 aaPredicted RBP20.17■□□□□ 0.82
RAB40C-212ENST00000569575 KLF14Q8TD94 323 aaPredicted RBP20.17■□□□□ 0.82
RAB40C-212ENST00000569575 MRPL24Q96A35 216 aaKnown RBP20.17■□□□□ 0.82
RAB40C-212ENST00000569575 RNF166Q96A37 237 aaPredicted RBP20.17■□□□□ 0.82
RAB40C-212ENST00000569575 SGK3Q96BR1 496 aa20.17■□□□□ 0.82
RAB40C-212ENST00000569575 OR2J1Q9GZK6 312 aa20.17■□□□□ 0.82
RAB40C-212ENST00000569575 FRRS1LQ9P0K9 344 aa20.17■□□□□ 0.82
RAB40C-212ENST00000569575 TRBV2A0A0J9YWF9 115 aa20.16■□□□□ 0.82
RAB40C-212ENST00000569575 TRIM64CA6NLI5 447 aa20.16■□□□□ 0.82
RAB40C-212ENST00000569575 B9A039 149 aa20.16■□□□□ 0.82
RAB40C-212ENST00000569575 PLPP2O43688 288 aa20.16■□□□□ 0.82
RAB40C-212ENST00000569575 IGHV3-13P01766 116 aa20.16■□□□□ 0.82
RAB40C-212ENST00000569575 TTRP02766 147 aa20.16■□□□□ 0.82
RAB40C-212ENST00000569575 SLC2A1P11166 492 aa20.16■□□□□ 0.82
RAB40C-212ENST00000569575 KITLGP21583 273 aa20.16■□□□□ 0.82
RAB40C-212ENST00000569575 CCL1P22362 96 aa20.16■□□□□ 0.82
RAB40C-212ENST00000569575 KLF3P57682 345 aaPredicted RBP20.16■□□□□ 0.82
RAB40C-212ENST00000569575 MLLT11Q13015 90 aaPredicted RBP20.16■□□□□ 0.82
RAB40C-212ENST00000569575 GK2Q14410 553 aaPredicted RBP20.16■□□□□ 0.82
RAB40C-212ENST00000569575 CDK5R1Q15078 307 aa20.16■□□□□ 0.82
RAB40C-212ENST00000569575 WDR38Q5JTN6 314 aa20.16■□□□□ 0.82
RAB40C-212ENST00000569575 ZBTB37Q5TC79 503 aa20.16■□□□□ 0.82
RAB40C-212ENST00000569575 UBE2UQ5VVX9 321 aa20.16■□□□□ 0.82
RAB40C-212ENST00000569575 AGAP6Q5VW22 663 aa20.16■□□□□ 0.82
RAB40C-212ENST00000569575 FBXL14Q8N1E6 418 aa20.16■□□□□ 0.82
RAB40C-212ENST00000569575 THRSPQ92748 146 aa20.16■□□□□ 0.82
RAB40C-212ENST00000569575 MARVELD3Q96A59 401 aa20.16■□□□□ 0.82
RAB40C-212ENST00000569575 C10orf35Q96D05 121 aa20.16■□□□□ 0.82
RAB40C-212ENST00000569575 SMIM19Q96E16 107 aa20.16■□□□□ 0.82
RAB40C-212ENST00000569575 REEP6Q96HR9 211 aa20.16■□□□□ 0.82
RAB40C-212ENST00000569575 BRD7Q9NPI1 651 aa20.16■□□□□ 0.82
RAB40C-212ENST00000569575 CYSLTR2Q9NS75 346 aa20.16■□□□□ 0.82
RAB40C-212ENST00000569575 GTF2A1LQ9UNN4 478 aa20.16■□□□□ 0.82
RAB40C-212ENST00000569575 SLC22A13Q9Y226 551 aa20.16■□□□□ 0.82
RAB40C-212ENST00000569575 OR4C45A6NMZ5 311 aa20.15■□□□□ 0.82
RAB40C-212ENST00000569575 PLAUP00749 431 aa20.15■□□□□ 0.82
RAB40C-212ENST00000569575 TTKP33981 857 aa20.15■□□□□ 0.82
RAB40C-212ENST00000569575 PSMB10P40306 273 aa20.15■□□□□ 0.82
RAB40C-212ENST00000569575 FABP6P51161 128 aa20.15■□□□□ 0.82
RAB40C-212ENST00000569575 MFGE8Q08431 387 aaPredicted RBP20.15■□□□□ 0.82
RAB40C-212ENST00000569575 ADIPOQQ15848 244 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms