RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 CEP85LQ5SZL2 805 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 CCNJQ5T5M9 372 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 FAM27D1Q5T7N8 215 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 C9orf66Q5T8R8 295 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 FHL5Q5TD97 284 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 SDHAF4Q5VUM1 108 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 ZNF324BQ6AW86 544 aaPredicted RBP2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 LCN12Q6JVE5 192 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 C11orf87Q6NUJ2 197 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 DNM1P46Q6ZS02 220 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 Q6ZVH6 145 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 USP43Q70EL4 1123 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 SMIM29Q86T20 159 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 PPP1R27Q86WC6 154 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 CDC20BQ86Y33 519 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 STX12Q86Y82 276 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 TMEM25Q86YD3 366 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 RAB43Q86YS6 212 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 SLC30A8Q8IWU4 369 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 TMEM251Q8N6I4 163 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 LFNGQ8NES3 379 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 OR2L5Q8NG80 312 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 OR4F15Q8NGB8 312 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 OR51G1Q8NGK1 321 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 OR2Y1Q8NGV0 311 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 OR5AK3PQ8NH89 298 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 TMEM234Q8WY98 164 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 FGF14Q92915 247 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 ZBTB9Q96C00 473 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 SGTBQ96EQ0 304 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 HIST1H4GQ99525 98 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 P2RX4Q99571 388 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 TSNAXQ99598 290 aaKnown RBP2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 SELENOSQ9BQE4 189 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 AGMATQ9BSE5 352 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 OSBPL11Q9BXB4 747 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 SELENOIQ9C0D9 397 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 OR51V1Q9H2C8 321 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 ZNF442Q9H7R0 627 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 RDH14Q9HBH5 336 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 FGF22Q9HCT0 170 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 DHRS4-AS1Q9P1J3 65 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 FBXL3Q9UKT7 428 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 VSIG4Q9Y279 399 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 TBL2Q9Y4P3 447 aaKnown RBP2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 UGT2A1Q9Y4X1 527 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 TNRC18O15417 2968 aaPredicted RBP2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 MAP3K15Q6ZN16 1313 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 ABCC3O15438 1527 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 ABCA10Q8WWZ4 1543 aa2.62□□□□□ -1.99
HERPUD1-211ENST00000566550 CACNA1IQ9P0X4 2223 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 BRWD3Q6RI45 1802 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 DNMT1P26358 1616 aaKnown RBP2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 DISP2A7MBM2 1401 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 ADAMTS7Q9UKP4 1686 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 A2ML1A8K2U0 1454 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 KIR2DS1A0A191URI9 304 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 GJE1A6NN92 205 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 H0Y980 276 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 SHOX2O60902 331 aaPredicted RBP2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 TBL1XO60907 577 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 SRP72O76094 671 aaKnown RBP2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 AQP8O94778 261 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 GJB5O95377 273 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 RAB36O95755 333 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 RETP07949 1114 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 SERPINA6P08185 405 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 RPS17P08708 135 aaKnown RBP2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 TACSTD2P09758 323 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 PGA4P0DJD7 388 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 PGA3P0DJD8 388 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 PGA5P0DJD9 388 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 COX5BP10606 129 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 CMA1P23946 247 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 AK4P27144 223 aaPredicted RBP2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 PSMB5P28074 263 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 UBE2E1P51965 193 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 AP3S2P59780 193 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 GNB1P62873 340 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 RPL10AP62906 217 aaKnown RBP2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 REEP5Q00765 189 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 DR1Q01658 176 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 SEMG2Q02383 582 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 FCHO2Q0JRZ9 810 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 ASAH1Q13510 395 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 KIR2DS1Q14954 304 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 TRIP13Q15645 432 aaPredicted RBP2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 GOLGA7BQ2TAP0 167 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 RFX4Q33E94 735 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 ZFP69Q49AA0 526 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 COX19Q49B96 90 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 GCSAMLQ5JQS6 135 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 TIMM23BQ5SRD1 257 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 C1orf100Q5SVJ3 147 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 C1orf146Q5VVC0 180 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 HBMQ6B0K9 141 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 EPGNQ6UW88 154 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 CXCL17Q6UXB2 119 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 PRSS41Q7RTY9 318 aa2.61□□□□□ -1.99
HERPUD1-211ENST00000566550 MTERF4Q7Z6M4 381 aaKnown RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms