RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 GALNT14Q96FL9 552 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 FAM210BQ96KR6 192 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 TAAR1Q96RJ0 339 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 SIKE1Q9BRV8 207 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 CALN1Q9BXU9 219 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 GAL3ST2Q9H3Q3 398 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 PATZ1Q9HBE1 687 aaKnown RBP3.38□□□□□ -1.87
CNOT1-209ENST00000566240 FAM49BQ9NUQ9 324 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 IFNKQ9P0W0 207 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 UVRAGQ9P2Y5 699 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 BZW2Q9Y6E2 419 aaKnown RBP3.38□□□□□ -1.87
CNOT1-209ENST00000566240 ATP7BP35670 1465 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 GTF3C1Q12789 2109 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 GAKO14976 1311 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 AKAP12Q02952 1782 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 ADGRB2O60241 1585 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 CDC42BPGQ6DT37 1551 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 ANKRD36BQ8N2N9 1353 aa3.38□□□□□ -1.87
CNOT1-209ENST00000566240 SCN2AQ99250 2005 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 BLMP54132 1417 aaPredicted RBP3.37□□□□□ -1.87
CNOT1-209ENST00000566240 SMG6Q86US8 1419 aaKnown RBP3.37□□□□□ -1.87
CNOT1-209ENST00000566240 NSD3Q9BZ95 1437 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 YTHDC2Q9H6S0 1430 aaKnown RBP3.37□□□□□ -1.87
CNOT1-209ENST00000566240 A2ML1A8K2U0 1454 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 MON2Q7Z3U7 1717 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 IGLV11-55A0A075B6I3 123 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 SLC22A20A6NK97 555 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 ERI3O43414 337 aaKnown RBP3.37□□□□□ -1.87
CNOT1-209ENST00000566240 CA11O75493 328 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 USF1P22415 310 aaPredicted RBP3.37□□□□□ -1.87
CNOT1-209ENST00000566240 RAB7AP51149 207 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 KRTAP10-5P60370 271 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 ATP6V0D1P61421 351 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 CKAP4Q07065 602 aaKnown RBP3.37□□□□□ -1.87
CNOT1-209ENST00000566240 CDH17Q12864 832 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 ART3Q13508 389 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 CAPRIN1Q14444 709 aaKnown RBP3.37□□□□□ -1.87
CNOT1-209ENST00000566240 GINS1Q14691 196 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 FAM83EQ2M2I3 478 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 TPRG1LQ5T0D9 272 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 MLIPQ5VWP3 458 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 ARL9Q6T311 187 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 PLET1Q6UQ28 207 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 FBXW12Q6X9E4 464 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 RNF175Q8N4F7 328 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 KIF2BQ8N4N8 673 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 MDS2Q8NDY4 140 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 OR10AD1Q8NGE0 317 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 OR10G4Q8NGN3 311 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 TCP10LQ8TDR4 215 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 LRRC29Q8WV35 223 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 ZNF317Q96PQ6 595 aaPredicted RBP3.37□□□□□ -1.87
CNOT1-209ENST00000566240 PARP12Q9H0J9 701 aaKnown RBP3.37□□□□□ -1.87
CNOT1-209ENST00000566240 XKR8Q9H6D3 395 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 UBE2ZQ9H832 354 aaPredicted RBP3.37□□□□□ -1.87
CNOT1-209ENST00000566240 ISYNA1Q9NPH2 558 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 SLC39A1Q9NY26 324 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 TRMT112Q9UI30 125 aaKnown RBP3.37□□□□□ -1.87
CNOT1-209ENST00000566240 NEU3Q9UQ49 428 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 PRG3Q9Y2Y8 225 aaPredicted RBP3.37□□□□□ -1.87
CNOT1-209ENST00000566240 KPTNQ9Y664 436 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 TULP4Q9NRJ4 1543 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 MROH7Q68CQ1 1323 aa3.37□□□□□ -1.87
CNOT1-209ENST00000566240 CEP170BQ9Y4F5 1589 aaPredicted RBP3.37□□□□□ -1.87
CNOT1-209ENST00000566240 FMN2Q9NZ56 1722 aa3.36□□□□□ -1.87
CNOT1-209ENST00000566240 PTPRMP28827 1452 aa3.36□□□□□ -1.87
CNOT1-209ENST00000566240 H7C1H1 209 aa3.36□□□□□ -1.87
CNOT1-209ENST00000566240 GABRPO00591 440 aa3.36□□□□□ -1.87
CNOT1-209ENST00000566240 MPDU1O75352 247 aa3.36□□□□□ -1.87
CNOT1-209ENST00000566240 GABARAPO95166 117 aa3.36□□□□□ -1.87
CNOT1-209ENST00000566240 ERGP11308 486 aa3.36□□□□□ -1.87
CNOT1-209ENST00000566240 PRPS2P11908 318 aa3.36□□□□□ -1.87
CNOT1-209ENST00000566240 IL32P24001 234 aa3.36□□□□□ -1.87
CNOT1-209ENST00000566240 HOXA9P31269 272 aa3.36□□□□□ -1.87
CNOT1-209ENST00000566240 UBE2AP49459 152 aa3.36□□□□□ -1.87
CNOT1-209ENST00000566240 CCR6P51684 374 aa3.36□□□□□ -1.87
CNOT1-209ENST00000566240 CCNG1P51959 295 aa3.36□□□□□ -1.87
CNOT1-209ENST00000566240 YWHAEP62258 255 aaKnown RBP3.36□□□□□ -1.87
CNOT1-209ENST00000566240 RGNQ15493 299 aa3.36□□□□□ -1.87
CNOT1-209ENST00000566240 C5orf64Q2M2E5 130 aa3.36□□□□□ -1.87
CNOT1-209ENST00000566240 ZNF829Q3KNS6 432 aaPredicted RBP3.36□□□□□ -1.87
CNOT1-209ENST00000566240 CHRFAM7AQ494W8 412 aa3.36□□□□□ -1.87
CNOT1-209ENST00000566240 METTL21CQ5VZV1 264 aa3.36□□□□□ -1.87
CNOT1-209ENST00000566240 KRTAP5-4Q6L8H1 288 aa3.36□□□□□ -1.87
CNOT1-209ENST00000566240 WDR82Q6UXN9 313 aa3.36□□□□□ -1.87
CNOT1-209ENST00000566240 NCCRP1Q6ZVX7 275 aaPredicted RBP3.36□□□□□ -1.87
CNOT1-209ENST00000566240 UNC93AQ86WB7 457 aa3.36□□□□□ -1.87
CNOT1-209ENST00000566240 ARRDC1Q8N5I2 433 aa3.36□□□□□ -1.87
CNOT1-209ENST00000566240 ASCC1Q8N9N2 400 aaKnown RBP3.36□□□□□ -1.87
CNOT1-209ENST00000566240 NOXO1Q8NFA2 376 aa3.36□□□□□ -1.87
CNOT1-209ENST00000566240 OR4A15Q8NGL6 344 aa3.36□□□□□ -1.87
CNOT1-209ENST00000566240 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
CNOT1-209ENST00000566240 ASB8Q9H765 288 aa3.36□□□□□ -1.87
CNOT1-209ENST00000566240 ZMAT5Q9UDW3 170 aaKnown RBP3.36□□□□□ -1.87
CNOT1-209ENST00000566240 FLVCR2Q9UPI3 526 aa3.36□□□□□ -1.87
CNOT1-209ENST00000566240 NRXN3Q9Y4C0 1643 aa3.36□□□□□ -1.87
CNOT1-209ENST00000566240 TOPAZ1Q8N9V7 1692 aa3.36□□□□□ -1.87
CNOT1-209ENST00000566240 LRPPRCP42704 1394 aaKnown RBP3.36□□□□□ -1.87
CNOT1-209ENST00000566240 CARMIL3Q8ND23 1372 aa3.36□□□□□ -1.87
CNOT1-209ENST00000566240 TRBV6-6A0A0A6YYG2 114 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms