RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 TFAP2EQ6VUC0 442 aa6.8□□□□□ -1.32
ATXN3-249ENST00000564606 LRRC69Q6ZNQ3 347 aa6.8□□□□□ -1.32
ATXN3-249ENST00000564606 HOGA1Q86XE5 327 aa6.8□□□□□ -1.32
ATXN3-249ENST00000564606 ANGPTL5Q86XS5 388 aa6.8□□□□□ -1.32
ATXN3-249ENST00000564606 BAP18Q8IXM2 172 aa6.8□□□□□ -1.32
ATXN3-249ENST00000564606 ARMC10Q8N2F6 343 aa6.8□□□□□ -1.32
ATXN3-249ENST00000564606 METTL27Q8N6F8 245 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-249ENST00000564606 ZNF283Q8N7M2 679 aa6.8□□□□□ -1.32
ATXN3-249ENST00000564606 CLRN3Q8NCR9 226 aa6.8□□□□□ -1.32
ATXN3-249ENST00000564606 OR52B4Q8NGK2 314 aa6.8□□□□□ -1.32
ATXN3-249ENST00000564606 OR1S1Q8NH92 325 aa6.8□□□□□ -1.32
ATXN3-249ENST00000564606 OR1L3Q8NH93 324 aa6.8□□□□□ -1.32
ATXN3-249ENST00000564606 STT3BQ8TCJ2 826 aa6.8□□□□□ -1.32
ATXN3-249ENST00000564606 PPP1R1CQ8WVI7 109 aa6.8□□□□□ -1.32
ATXN3-249ENST00000564606 GCDHQ92947 438 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-249ENST00000564606 NAT6Q93015 286 aa6.8□□□□□ -1.32
ATXN3-249ENST00000564606 FBXW5Q969U6 566 aa6.8□□□□□ -1.32
ATXN3-249ENST00000564606 CNTNAP3BQ96NU0 1288 aa6.8□□□□□ -1.32
ATXN3-249ENST00000564606 SYT3Q9BQG1 590 aa6.8□□□□□ -1.32
ATXN3-249ENST00000564606 ZNF416Q9BWM5 594 aa6.8□□□□□ -1.32
ATXN3-249ENST00000564606 PHF7Q9BWX1 381 aaPredicted RBP6.8□□□□□ -1.32
ATXN3-249ENST00000564606 REG4Q9BYZ8 158 aa6.8□□□□□ -1.32
ATXN3-249ENST00000564606 CHST6Q9GZX3 395 aa6.8□□□□□ -1.32
ATXN3-249ENST00000564606 OR10A2Q9H208 303 aa6.8□□□□□ -1.32
ATXN3-249ENST00000564606 CNTD2Q9H8S5 307 aa6.8□□□□□ -1.32
ATXN3-249ENST00000564606 LMAN1LQ9HAT1 526 aa6.8□□□□□ -1.32
ATXN3-249ENST00000564606 KLHL13Q9P2N7 655 aa6.8□□□□□ -1.32
ATXN3-249ENST00000564606 NDRG3Q9UGV2 375 aa6.8□□□□□ -1.32
ATXN3-249ENST00000564606 MRPS18BQ9Y676 258 aaKnown RBP6.8□□□□□ -1.32
ATXN3-249ENST00000564606 KCNMB2Q9Y691 235 aa6.8□□□□□ -1.32
ATXN3-249ENST00000564606 LRP4O75096 1905 aa6.8□□□□□ -1.32
ATXN3-249ENST00000564606 FANCMQ8IYD8 2048 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 SNRNP200O75643 2136 aaKnown RBP6.79□□□□□ -1.32
ATXN3-249ENST00000564606 TRBV6-7A0A0A0MS04 114 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 TMEM235A6NFC5 223 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 H0YC42 278 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 MS4A18H0YCH9 400 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 H3BMH7 237 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 M0QYG6 137 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 P2RY10O00398 339 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 JTBO76095 146 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 SFT2D2O95562 160 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 PNPP00491 289 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 APOC3P02656 99 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 CRHP06850 196 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 ZNF735P0CB33 412 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 ZNF250P15622 560 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 AMY2BP19961 511 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 RAB5CP51148 216 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 DUSP3P51452 185 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-249ENST00000564606 EFNB2P52799 333 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 CLDN6P56747 220 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 SRPXP78539 464 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 DEFA5Q01523 94 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 MFGE8Q08431 387 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-249ENST00000564606 BTN1A1Q13410 526 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 SMAD4Q13485 552 aaKnown RBP6.79□□□□□ -1.32
ATXN3-249ENST00000564606 MELKQ14680 651 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 ZNF169Q14929 603 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-249ENST00000564606 CNN3Q15417 329 aaKnown RBP6.79□□□□□ -1.32
ATXN3-249ENST00000564606 EXT1Q16394 746 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 MS4A18Q3C1V0 323 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 CHRFAM7AQ494W8 412 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 NKAIN1Q4KMZ8 207 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 ELP2Q6IA86 826 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 FAM109BQ6ICB4 259 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-249ENST00000564606 JMJD6Q6NYC1 403 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-249ENST00000564606 ZNF529Q6P280 563 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 PRSS54Q6PEW0 395 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 NHLRC1Q6VVB1 395 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 ABHD12BQ7Z5M8 362 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-249ENST00000564606 ANKRD37Q7Z713 158 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 SGPP2Q8IWX5 399 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-249ENST00000564606 ACBD4Q8NC06 268 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 ZBTB44Q8NCP5 570 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 SLC30A7Q8NEW0 376 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 OR52H1Q8NGJ2 320 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 OR1J2Q8NGS2 313 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 OR10AC1Q8NH08 325 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 C11orf40Q8WZ69 217 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 DCUN1D4Q92564 292 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 DVL3Q92997 716 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-249ENST00000564606 NKD1Q969G9 470 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 SPSB1Q96BD6 273 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 ZNF501Q96CX3 271 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-249ENST00000564606 MRPS24Q96EL2 167 aaKnown RBP6.79□□□□□ -1.32
ATXN3-249ENST00000564606 PGAM5Q96HS1 289 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 NARS2Q96I59 477 aaKnown RBP6.79□□□□□ -1.32
ATXN3-249ENST00000564606 C2orf50Q96LR7 162 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 GAS2L1Q99501 681 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-249ENST00000564606 TSNAXQ99598 290 aaKnown RBP6.79□□□□□ -1.32
ATXN3-249ENST00000564606 ELF4Q99607 663 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-249ENST00000564606 SLC6A7Q99884 636 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 DEFB126Q9BYW3 111 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 NKX6-2Q9C056 277 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-249ENST00000564606 SELENOIQ9C0D9 397 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 TINAGL1Q9GZM7 467 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-249ENST00000564606 SLC26A1Q9H2B4 701 aa6.79□□□□□ -1.32
ATXN3-249ENST00000564606 CDCP1Q9H5V8 836 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms