RNA–Protein interactions for RNA: ENST00000563605.1

AC009088.3-201, humanhuman

TSL 3 BASIC

Gene AC009088.3, Length 357 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009088.3-201ENST00000563605 DDX28Q9NUL7 540 aaKnown RBP13.18□□□□□ -0.3
AC009088.3-201ENST00000563605 HIF1ANQ9NWT6 349 aa13.18□□□□□ -0.3
AC009088.3-201ENST00000563605 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.18□□□□□ -0.3
AC009088.3-201ENST00000563605 ENOPH1Q9UHY7 261 aa13.18□□□□□ -0.3
AC009088.3-201ENST00000563605 GGT3PA6NGU5 568 aa13.17□□□□□ -0.3
AC009088.3-201ENST00000563605 SAC3D1A6NKF1 404 aa13.17□□□□□ -0.3
AC009088.3-201ENST00000563605 IQCF6A8MYZ5 107 aa13.17□□□□□ -0.3
AC009088.3-201ENST00000563605 ZNF878C9JN71 531 aa13.17□□□□□ -0.3
AC009088.3-201ENST00000563605 TBX1O43435 398 aa13.17□□□□□ -0.3
AC009088.3-201ENST00000563605 SELENOFO60613 162 aa13.17□□□□□ -0.3
AC009088.3-201ENST00000563605 ANXA2P07355 339 aaKnown RBP13.17□□□□□ -0.3
AC009088.3-201ENST00000563605 MSMBP08118 114 aa13.17□□□□□ -0.3
AC009088.3-201ENST00000563605 HSD11B1P28845 292 aa13.17□□□□□ -0.3
AC009088.3-201ENST00000563605 DVL1P1P54792 670 aaPredicted RBP13.17□□□□□ -0.3
AC009088.3-201ENST00000563605 ESRRGP62508 458 aa13.17□□□□□ -0.3
AC009088.3-201ENST00000563605 ZNF92Q03936 586 aa13.17□□□□□ -0.3
AC009088.3-201ENST00000563605 GLYATL3Q5SZD4 288 aa13.17□□□□□ -0.3
AC009088.3-201ENST00000563605 FAHD2BQ6P2I3 314 aaPredicted RBP13.17□□□□□ -0.3
AC009088.3-201ENST00000563605 DRAM2Q6UX65 266 aa13.17□□□□□ -0.3
AC009088.3-201ENST00000563605 CXXC5Q7LFL8 322 aaKnown RBP13.17□□□□□ -0.3
AC009088.3-201ENST00000563605 ZNF420Q8TAQ5 688 aaPredicted RBP13.17□□□□□ -0.3
AC009088.3-201ENST00000563605 THEM6Q8WUY1 208 aa13.17□□□□□ -0.3
AC009088.3-201ENST00000563605 TMEM186Q96B77 213 aa13.17□□□□□ -0.3
AC009088.3-201ENST00000563605 FAHD2AQ96GK7 314 aa13.17□□□□□ -0.3
AC009088.3-201ENST00000563605 MEGF10Q96KG7 1140 aa13.17□□□□□ -0.3
AC009088.3-201ENST00000563605 AMELYQ99218 206 aa13.17□□□□□ -0.3
AC009088.3-201ENST00000563605 MDFIQ99750 246 aa13.17□□□□□ -0.3
AC009088.3-201ENST00000563605 SLC30A2Q9BRI3 323 aa13.17□□□□□ -0.3
AC009088.3-201ENST00000563605 BRD7Q9NPI1 651 aa13.17□□□□□ -0.3
AC009088.3-201ENST00000563605 DNAJC27Q9NZQ0 273 aa13.17□□□□□ -0.3
AC009088.3-201ENST00000563605 OAZ3Q9UMX2 235 aa13.17□□□□□ -0.3
AC009088.3-201ENST00000563605 NPTNQ9Y639 398 aa13.17□□□□□ -0.3
AC009088.3-201ENST00000563605 MLNRO43193 412 aa13.16□□□□□ -0.3
AC009088.3-201ENST00000563605 ZNF205O95201 554 aa13.16□□□□□ -0.3
AC009088.3-201ENST00000563605 ANPEPP15144 967 aa13.16□□□□□ -0.3
AC009088.3-201ENST00000563605 CA6P23280 308 aa13.16□□□□□ -0.3
AC009088.3-201ENST00000563605 SRP14P37108 136 aaKnown RBP13.16□□□□□ -0.3
AC009088.3-201ENST00000563605 NAA10P41227 235 aaPredicted RBP13.16□□□□□ -0.3
AC009088.3-201ENST00000563605 SLC15A1P46059 708 aa13.16□□□□□ -0.3
AC009088.3-201ENST00000563605 CX3CR1P49238 355 aa13.16□□□□□ -0.3
AC009088.3-201ENST00000563605 SRP9P49458 86 aaKnown RBP13.16□□□□□ -0.3
AC009088.3-201ENST00000563605 PTGES3Q15185 160 aaKnown RBP13.16□□□□□ -0.3
AC009088.3-201ENST00000563605 SHFQ7M4L6 423 aa13.16□□□□□ -0.3
AC009088.3-201ENST00000563605 MOGAT3Q86VF5 341 aa13.16□□□□□ -0.3
AC009088.3-201ENST00000563605 TIGD4Q8IY51 512 aa13.16□□□□□ -0.3
AC009088.3-201ENST00000563605 OR51F2Q8NH61 342 aa13.16□□□□□ -0.3
AC009088.3-201ENST00000563605 RAB39BQ96DA2 213 aa13.16□□□□□ -0.3
AC009088.3-201ENST00000563605 GCM1Q9NP62 436 aa13.16□□□□□ -0.3
AC009088.3-201ENST00000563605 PCDHB10Q9UN67 800 aa13.16□□□□□ -0.3
AC009088.3-201ENST00000563605 CD300LBA8K4G0 201 aa13.15□□□□□ -0.3
AC009088.3-201ENST00000563605 M0R129 80 aa13.15□□□□□ -0.3
AC009088.3-201ENST00000563605 PLPP2O43688 288 aa13.15□□□□□ -0.3
AC009088.3-201ENST00000563605 CYB5R3P00387 301 aaPredicted RBP13.15□□□□□ -0.3
AC009088.3-201ENST00000563605 IGHV2-5P01817 119 aa13.15□□□□□ -0.3
AC009088.3-201ENST00000563605 H2BFMP0C1H6 154 aa13.15□□□□□ -0.3
AC009088.3-201ENST00000563605 OTX1P32242 354 aaPredicted RBP13.15□□□□□ -0.3
AC009088.3-201ENST00000563605 HCCSP53701 268 aa13.15□□□□□ -0.3
AC009088.3-201ENST00000563605 GRB2P62993 217 aaKnown RBP13.15□□□□□ -0.3
AC009088.3-201ENST00000563605 APOFQ13790 326 aa13.15□□□□□ -0.3
AC009088.3-201ENST00000563605 FAM57BQ71RH2 274 aa13.15□□□□□ -0.3
AC009088.3-201ENST00000563605 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.15□□□□□ -0.3
AC009088.3-201ENST00000563605 RNF133Q8WVZ7 376 aa13.15□□□□□ -0.3
AC009088.3-201ENST00000563605 MARCH7Q9H992 704 aa13.15□□□□□ -0.3
AC009088.3-201ENST00000563605 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.14□□□□□ -0.31
AC009088.3-201ENST00000563605 PRODHO43272 600 aa13.14□□□□□ -0.31
AC009088.3-201ENST00000563605 IGHV2-70P01814 119 aa13.14□□□□□ -0.31
AC009088.3-201ENST00000563605 MRPL3P09001 348 aaKnown RBP13.14□□□□□ -0.31
AC009088.3-201ENST00000563605 MMP16P51512 607 aa13.14□□□□□ -0.31
AC009088.3-201ENST00000563605 RAD23AP54725 363 aa13.14□□□□□ -0.31
AC009088.3-201ENST00000563605 LCN2P80188 198 aa13.14□□□□□ -0.31
AC009088.3-201ENST00000563605 ZMYND11Q15326 602 aa13.14□□□□□ -0.31
AC009088.3-201ENST00000563605 OR8G1Q15617 311 aa13.14□□□□□ -0.31
AC009088.3-201ENST00000563605 GFOD2Q3B7J2 385 aa13.14□□□□□ -0.31
AC009088.3-201ENST00000563605 KDM4DQ6B0I6 523 aa13.14□□□□□ -0.31
AC009088.3-201ENST00000563605 BCDIN3DQ7Z5W3 292 aaKnown RBP13.14□□□□□ -0.31
AC009088.3-201ENST00000563605 DVL3Q92997 716 aaPredicted RBP13.14□□□□□ -0.31
AC009088.3-201ENST00000563605 CIB1Q99828 191 aa13.14□□□□□ -0.31
AC009088.3-201ENST00000563605 PKP2Q99959 881 aa13.14□□□□□ -0.31
AC009088.3-201ENST00000563605 RBM4BQ9BQ04 359 aaKnown RBP13.14□□□□□ -0.31
AC009088.3-201ENST00000563605 REPIN1Q9BWE0 567 aaKnown RBP13.14□□□□□ -0.31
AC009088.3-201ENST00000563605 RIBC2Q9H4K1 309 aa13.14□□□□□ -0.31
AC009088.3-201ENST00000563605 UFSP2Q9NUQ7 469 aa13.14□□□□□ -0.31
AC009088.3-201ENST00000563605 KLHDC2Q9Y2U9 406 aa13.14□□□□□ -0.31
AC009088.3-201ENST00000563605 ORC6Q9Y5N6 252 aa13.14□□□□□ -0.31
AC009088.3-201ENST00000563605 TRAV20A0A0B4J274 112 aa13.13□□□□□ -0.31
AC009088.3-201ENST00000563605 H3BNX3 289 aa13.13□□□□□ -0.31
AC009088.3-201ENST00000563605 TMEM178BH3BS89 294 aa13.13□□□□□ -0.31
AC009088.3-201ENST00000563605 PRKYO43930 277 aa13.13□□□□□ -0.31
AC009088.3-201ENST00000563605 LYNP07948 512 aa13.13□□□□□ -0.31
AC009088.3-201ENST00000563605 PCMT1P22061 227 aa13.13□□□□□ -0.31
AC009088.3-201ENST00000563605 EPHA2P29317 976 aa13.13□□□□□ -0.31
AC009088.3-201ENST00000563605 PMELP40967 661 aa13.13□□□□□ -0.31
AC009088.3-201ENST00000563605 ZNF121P58317 390 aaPredicted RBP13.13□□□□□ -0.31
AC009088.3-201ENST00000563605 BTG1P62324 171 aa13.13□□□□□ -0.31
AC009088.3-201ENST00000563605 SRSF2Q01130 221 aaKnown RBP13.13□□□□□ -0.31
AC009088.3-201ENST00000563605 TIGD6Q17RP2 521 aa13.13□□□□□ -0.31
AC009088.3-201ENST00000563605 SLC35D3Q5M8T2 416 aa13.13□□□□□ -0.31
AC009088.3-201ENST00000563605 FAM201AQ5SY85 155 aa13.13□□□□□ -0.31
AC009088.3-201ENST00000563605 LCN1P1Q5VSP4 162 aa13.13□□□□□ -0.31
AC009088.3-201ENST00000563605 PRAMEF6Q5VXH4 476 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms