RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 IDH3GP51553 393 aaPredicted RBP8.81□□□□□ -1
SMG1-208ENST00000563448 TIMM23BQ5SRD1 257 aa8.81□□□□□ -1
SMG1-208ENST00000563448 PAMR1Q6UXH9 720 aa8.81□□□□□ -1
SMG1-208ENST00000563448 PAQR4Q8N4S7 273 aaPredicted RBP8.81□□□□□ -1
SMG1-208ENST00000563448 KBTBD8Q8NFY9 601 aa8.81□□□□□ -1
SMG1-208ENST00000563448 PRR7Q8TB68 274 aa8.81□□□□□ -1
SMG1-208ENST00000563448 ASB5Q8WWX0 329 aa8.81□□□□□ -1
SMG1-208ENST00000563448 LYZL4Q96KX0 146 aa8.81□□□□□ -1
SMG1-208ENST00000563448 KCNS3Q9BQ31 491 aa8.81□□□□□ -1
SMG1-208ENST00000563448 C1QTNF5Q9BXJ0 243 aa8.81□□□□□ -1
SMG1-208ENST00000563448 NOX4Q9NPH5 578 aa8.81□□□□□ -1
SMG1-208ENST00000563448 GPR84Q9NQS5 396 aa8.81□□□□□ -1
SMG1-208ENST00000563448 CRNNQ9UBG3 495 aaPredicted RBP8.81□□□□□ -1
SMG1-208ENST00000563448 HHLA2Q9UM44 414 aa8.81□□□□□ -1
SMG1-208ENST00000563448 HIVEP3Q5T1R4 2406 aa8.81□□□□□ -1
SMG1-208ENST00000563448 NBASA2RRP1 2371 aa8.81□□□□□ -1
SMG1-208ENST00000563448 TRBV5-7A0A0A0MS05 114 aa8.81□□□□□ -1
SMG1-208ENST00000563448 A0A0U1RQV5 110 aa8.81□□□□□ -1
SMG1-208ENST00000563448 CLEC2LP0C7M8 214 aa8.81□□□□□ -1
SMG1-208ENST00000563448 CCL1P22362 96 aa8.81□□□□□ -1
SMG1-208ENST00000563448 CHRNB4P30926 498 aa8.81□□□□□ -1
SMG1-208ENST00000563448 SDC2P34741 201 aa8.81□□□□□ -1
SMG1-208ENST00000563448 COLCA1Q6ZS62 124 aa8.81□□□□□ -1
SMG1-208ENST00000563448 C22orf34Q6ZV56 151 aa8.81□□□□□ -1
SMG1-208ENST00000563448 SLC30A7Q8NEW0 376 aa8.81□□□□□ -1
SMG1-208ENST00000563448 TSEN15Q8WW01 171 aaKnown RBP8.81□□□□□ -1
SMG1-208ENST00000563448 SGK3Q96BR1 496 aa8.81□□□□□ -1
SMG1-208ENST00000563448 TSC22D3Q99576 134 aa8.81□□□□□ -1
SMG1-208ENST00000563448 ACTR6Q9GZN1 396 aa8.81□□□□□ -1
SMG1-208ENST00000563448 OR10A2Q9H208 303 aa8.81□□□□□ -1
SMG1-208ENST00000563448 DHDHQ9UQ10 334 aa8.81□□□□□ -1
SMG1-208ENST00000563448 A0A1B0GUH1 482 aa8.8□□□□□ -1
SMG1-208ENST00000563448 ANKRD61A6NGH8 418 aa8.8□□□□□ -1
SMG1-208ENST00000563448 SYT7O43581 403 aa8.8□□□□□ -1
SMG1-208ENST00000563448 WNT5AP41221 380 aa8.8□□□□□ -1
SMG1-208ENST00000563448 MXD1Q05195 221 aa8.8□□□□□ -1
SMG1-208ENST00000563448 TAB1Q15750 504 aa8.8□□□□□ -1
SMG1-208ENST00000563448 TBC1D28Q2M2D7 210 aa8.8□□□□□ -1
SMG1-208ENST00000563448 GFOD2Q3B7J2 385 aa8.8□□□□□ -1
SMG1-208ENST00000563448 HSD17B12Q53GQ0 312 aa8.8□□□□□ -1
SMG1-208ENST00000563448 GLYATL3Q5SZD4 288 aa8.8□□□□□ -1
SMG1-208ENST00000563448 PLPP7Q8NBV4 271 aa8.8□□□□□ -1
SMG1-208ENST00000563448 STEAP2Q8NFT2 490 aa8.8□□□□□ -1
SMG1-208ENST00000563448 OR52H1Q8NGJ2 320 aa8.8□□□□□ -1
SMG1-208ENST00000563448 OR13C3Q8NGS6 347 aa8.8□□□□□ -1
SMG1-208ENST00000563448 OR2AE1Q8NHA4 323 aa8.8□□□□□ -1
SMG1-208ENST00000563448 PHYHIPQ92561 330 aa8.8□□□□□ -1
SMG1-208ENST00000563448 TMEM106AQ96A25 262 aa8.8□□□□□ -1
SMG1-208ENST00000563448 MED18Q9BUE0 208 aa8.8□□□□□ -1
SMG1-208ENST00000563448 SP140LQ9H930 580 aa8.8□□□□□ -1
SMG1-208ENST00000563448 PTTG2Q9NZH5 202 aa8.8□□□□□ -1
SMG1-208ENST00000563448 COQ3Q9NZJ6 369 aa8.8□□□□□ -1
SMG1-208ENST00000563448 IGHV1-18A0A0C4DH31 117 aa8.8□□□□□ -1
SMG1-208ENST00000563448 A0A1B0GVI7 797 aa8.8□□□□□ -1
SMG1-208ENST00000563448 SMIM30A4D0T7 59 aa8.8□□□□□ -1
SMG1-208ENST00000563448 B8ZZF3 427 aa8.8□□□□□ -1
SMG1-208ENST00000563448 C16orf97H3BN30 126 aa8.8□□□□□ -1
SMG1-208ENST00000563448 ARL6IP5O75915 188 aa8.8□□□□□ -1
SMG1-208ENST00000563448 NGFP01138 241 aa8.8□□□□□ -1
SMG1-208ENST00000563448 IL1AP01583 271 aa8.8□□□□□ -1
SMG1-208ENST00000563448 IGLV1-44P01699 117 aa8.8□□□□□ -1
SMG1-208ENST00000563448 MAPK3P27361 379 aaPredicted RBP8.8□□□□□ -1
SMG1-208ENST00000563448 MTNR1BP49286 362 aa8.8□□□□□ -1
SMG1-208ENST00000563448 ASCL1P50553 236 aa8.8□□□□□ -1
SMG1-208ENST00000563448 PPA1Q15181 289 aa8.8□□□□□ -1
SMG1-208ENST00000563448 CDSNQ15517 529 aa8.8□□□□□ -1
SMG1-208ENST00000563448 SLC25A35Q3KQZ1 300 aa8.8□□□□□ -1
SMG1-208ENST00000563448 ASPHD2Q6ICH7 369 aa8.8□□□□□ -1
SMG1-208ENST00000563448 Q6ZSR3 168 aa8.8□□□□□ -1
SMG1-208ENST00000563448 DOK3Q7L591 496 aa8.8□□□□□ -1
SMG1-208ENST00000563448 COMMD2Q86X83 199 aa8.8□□□□□ -1
SMG1-208ENST00000563448 OR1J2Q8NGS2 313 aa8.8□□□□□ -1
SMG1-208ENST00000563448 OR14K1Q8NGZ2 314 aa8.8□□□□□ -1
SMG1-208ENST00000563448 FAM71F1Q96KD3 344 aaPredicted RBP8.8□□□□□ -1
SMG1-208ENST00000563448 ZNF275Q9NSD4 429 aaPredicted RBP8.8□□□□□ -1
SMG1-208ENST00000563448 SNTG1Q9NSN8 517 aa8.8□□□□□ -1
SMG1-208ENST00000563448 ERRFI1Q9UJM3 462 aaPredicted RBP8.8□□□□□ -1
SMG1-208ENST00000563448 PMF1-BGLAPU3KQ54 211 aa8.8□□□□□ -1
SMG1-208ENST00000563448 TRAV1-2A0A0B4J238 106 aa8.79□□□□□ -1
SMG1-208ENST00000563448 NKX2-6A6NCS4 301 aa8.79□□□□□ -1
SMG1-208ENST00000563448 FAM90A27PA6NNH2 459 aa8.79□□□□□ -1
SMG1-208ENST00000563448 C1QL1O75973 258 aa8.79□□□□□ -1
SMG1-208ENST00000563448 RAF1P04049 648 aa8.79□□□□□ -1
SMG1-208ENST00000563448 CECR9P0C854 216 aa8.79□□□□□ -1
SMG1-208ENST00000563448 SRMP19623 302 aa8.79□□□□□ -1
SMG1-208ENST00000563448 CAV3P56539 151 aa8.79□□□□□ -1
SMG1-208ENST00000563448 DYNC1I2Q13409 638 aaKnown RBP8.79□□□□□ -1
SMG1-208ENST00000563448 C4orf17Q53FE4 359 aa8.79□□□□□ -1
SMG1-208ENST00000563448 NR2C2APQ86WQ0 139 aa8.79□□□□□ -1
SMG1-208ENST00000563448 ZNF101Q8IZC7 436 aa8.79□□□□□ -1
SMG1-208ENST00000563448 ZNF843Q8N446 348 aa8.79□□□□□ -1
SMG1-208ENST00000563448 FAM169BQ8N8A8 192 aa8.79□□□□□ -1
SMG1-208ENST00000563448 LILRB4Q8NHJ6 448 aa8.79□□□□□ -1
SMG1-208ENST00000563448 APOBEC3DQ96AK3 386 aaPredicted RBP8.79□□□□□ -1
SMG1-208ENST00000563448 REEP6Q96HR9 211 aa8.79□□□□□ -1
SMG1-208ENST00000563448 FAM210AQ96ND0 272 aa8.79□□□□□ -1
SMG1-208ENST00000563448 BARHL1Q9BZE3 327 aa8.79□□□□□ -1
SMG1-208ENST00000563448 TPK1Q9H3S4 243 aa8.79□□□□□ -1
SMG1-208ENST00000563448 POFUT1Q9H488 388 aa8.79□□□□□ -1
SMG1-208ENST00000563448 NPAP1Q9NZP6 1156 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms