RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 RNFT2Q96EX2 444 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 MROQ9BYG7 248 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 RGCCQ9H4X1 137 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 SP140LQ9H930 580 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 FGF20Q9NP95 211 aaPredicted RBP11.44□□□□□ -0.58
CDH1-204ENST00000562118 MYOZ1Q9NP98 299 aaPredicted RBP11.44□□□□□ -0.58
CDH1-204ENST00000562118 DLL4Q9NR61 685 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 DUSP13Q9UII6 198 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 GPR160Q9UJ42 338 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 ZNF391Q9UJN7 358 aa11.44□□□□□ -0.58
CDH1-204ENST00000562118 CR1P17927 2039 aa11.43□□□□□ -0.58
CDH1-204ENST00000562118 A0A0U1RQV5 110 aa11.43□□□□□ -0.58
CDH1-204ENST00000562118 hCG_38984A0A1B0GV85 526 aa11.43□□□□□ -0.58
CDH1-204ENST00000562118 ZNF670-ZNF695F2Z2N8 137 aa11.43□□□□□ -0.58
CDH1-204ENST00000562118 NCR1O76036 304 aa11.43□□□□□ -0.58
CDH1-204ENST00000562118 LCATP04180 440 aa11.43□□□□□ -0.58
CDH1-204ENST00000562118 ADRA2AP08913 450 aa11.43□□□□□ -0.58
CDH1-204ENST00000562118 SELEP16581 610 aa11.43□□□□□ -0.58
CDH1-204ENST00000562118 HSD11B1P28845 292 aa11.43□□□□□ -0.58
CDH1-204ENST00000562118 HLXQ14774 488 aaPredicted RBP11.43□□□□□ -0.58
CDH1-204ENST00000562118 OR8B8Q15620 311 aa11.43□□□□□ -0.58
CDH1-204ENST00000562118 SMN1Q16637 294 aaKnown RBP11.43□□□□□ -0.58
CDH1-204ENST00000562118 PCGF3Q3KNV8 242 aa11.43□□□□□ -0.58
CDH1-204ENST00000562118 ZMAT1Q5H9K5 638 aa11.43□□□□□ -0.58
CDH1-204ENST00000562118 TGIF2LYQ8IUE0 185 aa11.43□□□□□ -0.58
CDH1-204ENST00000562118 WFDC11Q8NEX6 87 aa11.43□□□□□ -0.58
CDH1-204ENST00000562118 CYGBQ8WWM9 190 aa11.43□□□□□ -0.58
CDH1-204ENST00000562118 GTF3AQ92664 365 aaKnown RBP11.43□□□□□ -0.58
CDH1-204ENST00000562118 DIRC2Q96SL1 478 aa11.43□□□□□ -0.58
CDH1-204ENST00000562118 SLC30A2Q9BRI3 323 aa11.43□□□□□ -0.58
CDH1-204ENST00000562118 RAB1BQ9H0U4 201 aa11.43□□□□□ -0.58
CDH1-204ENST00000562118 VCX3BQ9H321 246 aa11.43□□□□□ -0.58
CDH1-204ENST00000562118 MOB1AQ9H8S9 216 aa11.43□□□□□ -0.58
CDH1-204ENST00000562118 G6PC2Q9NQR9 355 aa11.43□□□□□ -0.58
CDH1-204ENST00000562118 INPP5EQ9NRR6 644 aa11.43□□□□□ -0.58
CDH1-204ENST00000562118 PLCXD1Q9NUJ7 323 aa11.43□□□□□ -0.58
CDH1-204ENST00000562118 PTTG3PQ9NZH4 202 aa11.43□□□□□ -0.58
CDH1-204ENST00000562118 NUFIP1Q9UHK0 495 aaKnown RBP11.43□□□□□ -0.58
CDH1-204ENST00000562118 ZDHHC8Q9ULC8 765 aa11.43□□□□□ -0.58
CDH1-204ENST00000562118 RPL36Q9Y3U8 105 aaKnown RBP11.43□□□□□ -0.58
CDH1-204ENST00000562118 PCDHGB1Q9Y5G3 927 aa11.43□□□□□ -0.58
CDH1-204ENST00000562118 YLPM1P49750 1951 aaKnown RBP11.43□□□□□ -0.58
CDH1-204ENST00000562118 A0A1W2PPW3 197 aa11.42□□□□□ -0.58
CDH1-204ENST00000562118 VWC2LB2RUY7 222 aa11.42□□□□□ -0.58
CDH1-204ENST00000562118 PTBP3O95758 552 aaKnown RBP11.42□□□□□ -0.58
CDH1-204ENST00000562118 PNPP00491 289 aa11.42□□□□□ -0.58
CDH1-204ENST00000562118 IGHV1-46P01743 117 aa11.42□□□□□ -0.58
CDH1-204ENST00000562118 CSF3P09919 207 aa11.42□□□□□ -0.58
CDH1-204ENST00000562118 SLC2A1P11166 492 aa11.42□□□□□ -0.58
CDH1-204ENST00000562118 NAT2P11245 290 aa11.42□□□□□ -0.58
CDH1-204ENST00000562118 PIPP12273 146 aaPredicted RBP11.42□□□□□ -0.58
CDH1-204ENST00000562118 GIFP27352 417 aa11.42□□□□□ -0.58
CDH1-204ENST00000562118 SLC6A9P48067 706 aa11.42□□□□□ -0.58
CDH1-204ENST00000562118 RIDAP52758 137 aaKnown RBP11.42□□□□□ -0.58
CDH1-204ENST00000562118 DSCR9P59020 149 aa11.42□□□□□ -0.58
CDH1-204ENST00000562118 FAM3AP98173 230 aa11.42□□□□□ -0.58
CDH1-204ENST00000562118 MALLQ13021 153 aa11.42□□□□□ -0.58
CDH1-204ENST00000562118 TAF13Q15543 124 aa11.42□□□□□ -0.58
CDH1-204ENST00000562118 FDX2Q6P4F2 183 aa11.42□□□□□ -0.58
CDH1-204ENST00000562118 SPATC1Q76KD6 591 aa11.42□□□□□ -0.58
CDH1-204ENST00000562118 KRT77Q7Z794 578 aa11.42□□□□□ -0.58
CDH1-204ENST00000562118 ZCCHC24Q8N2G6 241 aaKnown RBP11.42□□□□□ -0.58
CDH1-204ENST00000562118 ZNF283Q8N7M2 679 aa11.42□□□□□ -0.58
CDH1-204ENST00000562118 OR8G5Q8NG78 346 aa11.42□□□□□ -0.58
CDH1-204ENST00000562118 OR8B12Q8NGG6 310 aa11.42□□□□□ -0.58
CDH1-204ENST00000562118 CNIH3Q8TBE1 160 aa11.42□□□□□ -0.58
CDH1-204ENST00000562118 SGK3Q96BR1 496 aa11.42□□□□□ -0.58
CDH1-204ENST00000562118 ANKRD60Q9BZ19 345 aa11.42□□□□□ -0.58
CDH1-204ENST00000562118 DYNLRB1Q9NP97 96 aa11.42□□□□□ -0.58
CDH1-204ENST00000562118 FKBP14Q9NWM8 211 aa11.42□□□□□ -0.58
CDH1-204ENST00000562118 F8P00451 2351 aa11.42□□□□□ -0.58
CDH1-204ENST00000562118 LOC390937A0A1W2PQ73 354 aa11.41□□□□□ -0.58
CDH1-204ENST00000562118 METTL15A6NJ78 407 aa11.41□□□□□ -0.58
CDH1-204ENST00000562118 LILRA1O75019 489 aa11.41□□□□□ -0.58
CDH1-204ENST00000562118 FAM20BO75063 409 aa11.41□□□□□ -0.58
CDH1-204ENST00000562118 RP2O75695 350 aa11.41□□□□□ -0.58
CDH1-204ENST00000562118 APOL3O95236 402 aa11.41□□□□□ -0.58
CDH1-204ENST00000562118 MYF6P23409 242 aa11.41□□□□□ -0.58
CDH1-204ENST00000562118 CFL1P23528 166 aaKnown RBP11.41□□□□□ -0.58
CDH1-204ENST00000562118 ZNF81P51508 661 aa11.41□□□□□ -0.58
CDH1-204ENST00000562118 IL5RAQ01344 420 aa11.41□□□□□ -0.58
CDH1-204ENST00000562118 MFGE8Q08431 387 aaPredicted RBP11.41□□□□□ -0.58
CDH1-204ENST00000562118 RIN1Q13671 783 aa11.41□□□□□ -0.58
CDH1-204ENST00000562118 GALEQ14376 348 aa11.41□□□□□ -0.58
CDH1-204ENST00000562118 NKPD1Q17RQ9 610 aa11.41□□□□□ -0.58
CDH1-204ENST00000562118 ZNF829Q3KNS6 432 aaPredicted RBP11.41□□□□□ -0.58
CDH1-204ENST00000562118 OR2T2Q6IF00 324 aa11.41□□□□□ -0.58
CDH1-204ENST00000562118 PGAP1Q75T13 922 aa11.41□□□□□ -0.58
CDH1-204ENST00000562118 KCTD20Q7Z5Y7 419 aa11.41□□□□□ -0.58
CDH1-204ENST00000562118 C8orf59Q8N0T1 100 aaPredicted RBP11.41□□□□□ -0.58
CDH1-204ENST00000562118 ZNF786Q8N393 782 aa11.41□□□□□ -0.58
CDH1-204ENST00000562118 ACBD7Q8N6N7 88 aa11.41□□□□□ -0.58
CDH1-204ENST00000562118 PLPP7Q8NBV4 271 aa11.41□□□□□ -0.58
CDH1-204ENST00000562118 OR2AE1Q8NHA4 323 aa11.41□□□□□ -0.58
CDH1-204ENST00000562118 C10orf105Q8TEF2 133 aa11.41□□□□□ -0.58
CDH1-204ENST00000562118 SNX33Q8WV41 574 aa11.41□□□□□ -0.58
CDH1-204ENST00000562118 LYZL4Q96KX0 146 aa11.41□□□□□ -0.58
CDH1-204ENST00000562118 TMUB1Q9BVT8 246 aa11.41□□□□□ -0.58
CDH1-204ENST00000562118 OR10A2Q9H208 303 aa11.41□□□□□ -0.58
CDH1-204ENST00000562118 MRPL15Q9P015 296 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms