RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 APOBEC3AP31941 199 aaPredicted RBP4.86□□□□□ -1.63
LINC01963-201ENST00000562038 CDKN2AP42771 156 aaKnown RBP4.86□□□□□ -1.63
LINC01963-201ENST00000562038 GUCA1AP43080 201 aaPredicted RBP4.86□□□□□ -1.63
LINC01963-201ENST00000562038 TUBA4AP68366 448 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 PLP2Q04941 152 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 ELFN2Q5R3F8 820 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 AGAP6Q5VW22 663 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 LRRC17Q8N6Y2 441 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 ASCC1Q8N9N2 400 aaKnown RBP4.86□□□□□ -1.63
LINC01963-201ENST00000562038 OR2T27Q8NH04 317 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 Q8TCH9 128 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 HPS1Q92902 700 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 ERMAPQ96PL5 475 aaPredicted RBP4.86□□□□□ -1.63
LINC01963-201ENST00000562038 KCNJ15Q99712 375 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 WDR76Q9H967 626 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 TRIM36Q9NQ86 728 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 SPATA2Q9UM82 520 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 IER3IP1Q9Y5U9 82 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 TRAV27A0A087WT01 109 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 FAM90A27PA6NNH2 459 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 ZNF878C9JN71 531 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 PRR23D1E9PI22 279 aaPredicted RBP4.86□□□□□ -1.63
LINC01963-201ENST00000562038 TRIM77I1YAP6 450 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 C19orf84I3L1E1 186 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 ISG15P05161 165 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 PRR23D2P0DMB1 279 aaPredicted RBP4.86□□□□□ -1.63
LINC01963-201ENST00000562038 BMP4P12644 408 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 HLA-DOBP13765 273 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 HIST1H1CP16403 213 aaKnown RBP4.86□□□□□ -1.63
LINC01963-201ENST00000562038 CFPP27918 469 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 GSTT1P30711 240 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 RPL4P36578 427 aaKnown RBP4.86□□□□□ -1.63
LINC01963-201ENST00000562038 OPRL1P41146 370 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 CDC34P49427 236 aaPredicted RBP4.86□□□□□ -1.63
LINC01963-201ENST00000562038 ACTA2P62736 377 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 ACTG2P63267 376 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 CCDC58Q4VC31 144 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 OR9Q2Q8NGE9 314 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 OR52H1Q8NGJ2 320 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 OR1F12Q8NHA8 337 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 RHOXF1Q8NHV9 184 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 OTOSQ8NHW6 89 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 DTD1Q8TEA8 209 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 MRPL24Q96A35 216 aaKnown RBP4.86□□□□□ -1.63
LINC01963-201ENST00000562038 APOBEC3DQ96AK3 386 aaPredicted RBP4.86□□□□□ -1.63
LINC01963-201ENST00000562038 CCDC124Q96CT7 223 aaKnown RBP4.86□□□□□ -1.63
LINC01963-201ENST00000562038 TXNDC15Q96J42 360 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 CITED1Q99966 193 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 ANKRD60Q9BZ19 345 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 EGLN1Q9GZT9 426 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 TLNRD1Q9H1K6 362 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 ZDHHC8Q9ULC8 765 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 IGHV3-15A0A0B4J1V0 119 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 TRAV20A0A0B4J274 112 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 NKX2-6A6NCS4 301 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 IQCF6A8MYZ5 107 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 EEF1E1-BLOC1S5C9J1V9 151 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 BLOC1S5-TXNDC5H3BN57 136 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 EEF1E1O43324 174 aaKnown RBP4.86□□□□□ -1.63
LINC01963-201ENST00000562038 ATP6V1G2O95670 118 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 SERPINA3P01011 423 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 KLK2P20151 261 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 MYF6P23409 242 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 FMO3P31513 532 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 CFHR2P36980 270 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 MMP16P51512 607 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 SIRPAP78324 504 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 GPR50Q13585 617 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 CRMP1Q14194 572 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 GINS1Q14691 196 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 PTGES3Q15185 160 aaKnown RBP4.86□□□□□ -1.63
LINC01963-201ENST00000562038 CDSNQ15517 529 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 KLHL22Q53GT1 634 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 SAPCD1Q5SSQ6 148 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 SKA3Q8IX90 412 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 DVL3Q92997 716 aaPredicted RBP4.86□□□□□ -1.63
LINC01963-201ENST00000562038 SPTSSAQ969W0 71 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 Q96M85 177 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 SEC22CQ9BRL7 303 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 C1orf43Q9BWL3 253 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 PRR14Q9BWN1 585 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 PLA2G12AQ9BZM1 189 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 NPAP1Q9NZP6 1156 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 OAZ3Q9UMX2 235 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 PLEKHA6Q9Y2H5 1048 aa4.86□□□□□ -1.63
LINC01963-201ENST00000562038 POLR3KQ9Y2Y1 108 aaPredicted RBP4.86□□□□□ -1.63
LINC01963-201ENST00000562038 APCP25054 2843 aa4.85□□□□□ -1.63
LINC01963-201ENST00000562038 OR6C68A6NDL8 312 aa4.85□□□□□ -1.63
LINC01963-201ENST00000562038 DLGAP1O14490 977 aa4.85□□□□□ -1.63
LINC01963-201ENST00000562038 DENRO43583 198 aaKnown RBP4.85□□□□□ -1.63
LINC01963-201ENST00000562038 SAP30O75446 220 aa4.85□□□□□ -1.63
LINC01963-201ENST00000562038 KRT33AO76009 404 aa4.85□□□□□ -1.63
LINC01963-201ENST00000562038 CRYAAP02489 173 aa4.85□□□□□ -1.63
LINC01963-201ENST00000562038 ZNF735P0CB33 412 aa4.85□□□□□ -1.63
LINC01963-201ENST00000562038 CTLA4P16410 223 aa4.85□□□□□ -1.63
LINC01963-201ENST00000562038 CAPGP40121 348 aa4.85□□□□□ -1.63
LINC01963-201ENST00000562038 PSMA6P60900 246 aaKnown RBP4.85□□□□□ -1.63
LINC01963-201ENST00000562038 ERVK-25P63136 954 aa4.85□□□□□ -1.63
LINC01963-201ENST00000562038 CDK5R2Q13319 367 aa4.85□□□□□ -1.63
LINC01963-201ENST00000562038 MED21Q13503 144 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms