RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 COMMD4Q9H0A8 199 aa10.93□□□□□ -0.66
CMTM4-203ENST00000561680 OR10A2Q9H208 303 aa10.93□□□□□ -0.66
CMTM4-203ENST00000561680 NDUFB11Q9NX14 153 aa10.93□□□□□ -0.66
CMTM4-203ENST00000561680 CRIM1Q9NZV1 1036 aa10.93□□□□□ -0.66
CMTM4-203ENST00000561680 HELZ2Q9BYK8 2649 aaKnown RBP10.93□□□□□ -0.66
CMTM4-203ENST00000561680 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.92□□□□□ -0.66
CMTM4-203ENST00000561680 DEFB108AA8MXU0 73 aa10.92□□□□□ -0.66
CMTM4-203ENST00000561680 ATP6V1G2-DDX39BF2Z307 99 aa10.92□□□□□ -0.66
CMTM4-203ENST00000561680 TBX1O43435 398 aa10.92□□□□□ -0.66
CMTM4-203ENST00000561680 XRCC2O43543 280 aa10.92□□□□□ -0.66
CMTM4-203ENST00000561680 GPRIN2O60269 458 aa10.92□□□□□ -0.66
CMTM4-203ENST00000561680 NGFP01138 241 aa10.92□□□□□ -0.66
CMTM4-203ENST00000561680 ISG15P05161 165 aa10.92□□□□□ -0.66
CMTM4-203ENST00000561680 CCL1P22362 96 aa10.92□□□□□ -0.66
CMTM4-203ENST00000561680 LOXP28300 417 aaPredicted RBP10.92□□□□□ -0.66
CMTM4-203ENST00000561680 SLC3A1Q07837 685 aa10.92□□□□□ -0.66
CMTM4-203ENST00000561680 ZNF704Q6ZNC4 412 aaPredicted RBP10.92□□□□□ -0.66
CMTM4-203ENST00000561680 ABHD4Q8TB40 342 aa10.92□□□□□ -0.66
CMTM4-203ENST00000561680 FAM222BQ8WU58 562 aa10.92□□□□□ -0.66
CMTM4-203ENST00000561680 RGP1Q92546 391 aaPredicted RBP10.92□□□□□ -0.66
CMTM4-203ENST00000561680 GHSRQ92847 366 aa10.92□□□□□ -0.66
CMTM4-203ENST00000561680 SPSB4Q96A44 273 aa10.92□□□□□ -0.66
CMTM4-203ENST00000561680 TMIGD2Q96BF3 282 aa10.92□□□□□ -0.66
CMTM4-203ENST00000561680 PLPPR2Q96GM1 343 aa10.92□□□□□ -0.66
CMTM4-203ENST00000561680 LYZL4Q96KX0 146 aa10.92□□□□□ -0.66
CMTM4-203ENST00000561680 POFUT1Q9H488 388 aa10.92□□□□□ -0.66
CMTM4-203ENST00000561680 ESRP2Q9H6T0 727 aaKnown RBP10.92□□□□□ -0.66
CMTM4-203ENST00000561680 EIF3KQ9UBQ5 218 aaKnown RBP10.92□□□□□ -0.66
CMTM4-203ENST00000561680 ZNF391Q9UJN7 358 aa10.92□□□□□ -0.66
CMTM4-203ENST00000561680 ZNF281Q9Y2X9 895 aa10.92□□□□□ -0.66
CMTM4-203ENST00000561680 SF3B6Q9Y3B4 125 aaKnown RBP10.92□□□□□ -0.66
CMTM4-203ENST00000561680 N6AMT1Q9Y5N5 214 aa10.92□□□□□ -0.66
CMTM4-203ENST00000561680 TENM4Q6N022 2769 aa10.91□□□□□ -0.66
CMTM4-203ENST00000561680 TANC2Q9HCD6 1990 aa10.91□□□□□ -0.66
CMTM4-203ENST00000561680 LOC107986453A0A1B0GWG9 222 aa10.91□□□□□ -0.66
CMTM4-203ENST00000561680 PRSS44E7EML9 344 aa10.91□□□□□ -0.66
CMTM4-203ENST00000561680 ABCD4O14678 606 aa10.91□□□□□ -0.66
CMTM4-203ENST00000561680 FAM157BP0CG42 384 aa10.91□□□□□ -0.66
CMTM4-203ENST00000561680 ACHEP22303 614 aa10.91□□□□□ -0.66
CMTM4-203ENST00000561680 NR4A1P22736 598 aa10.91□□□□□ -0.66
CMTM4-203ENST00000561680 GABRA5P31644 462 aa10.91□□□□□ -0.66
CMTM4-203ENST00000561680 RAD52P43351 418 aa10.91□□□□□ -0.66
CMTM4-203ENST00000561680 UCP2P55851 309 aa10.91□□□□□ -0.66
CMTM4-203ENST00000561680 PPP1CBP62140 327 aa10.91□□□□□ -0.66
CMTM4-203ENST00000561680 RPS25P62851 125 aaKnown RBP10.91□□□□□ -0.66
CMTM4-203ENST00000561680 NKX6-1P78426 367 aaPredicted RBP10.91□□□□□ -0.66
CMTM4-203ENST00000561680 ODF4Q2M2E3 257 aa10.91□□□□□ -0.66
CMTM4-203ENST00000561680 GLYATL3Q5SZD4 288 aa10.91□□□□□ -0.66
CMTM4-203ENST00000561680 TMEM244Q5VVB8 128 aa10.91□□□□□ -0.66
CMTM4-203ENST00000561680 UNQ6126/PRO20091Q6UXV3 157 aa10.91□□□□□ -0.66
CMTM4-203ENST00000561680 C1orf174Q8IYL3 243 aa10.91□□□□□ -0.66
CMTM4-203ENST00000561680 ZNF676Q8N7Q3 588 aa10.91□□□□□ -0.66
CMTM4-203ENST00000561680 OR5L1Q8NGL2 311 aa10.91□□□□□ -0.66
CMTM4-203ENST00000561680 OR2AE1Q8NHA4 323 aa10.91□□□□□ -0.66
CMTM4-203ENST00000561680 OR51E1Q8TCB6 317 aa10.91□□□□□ -0.66
CMTM4-203ENST00000561680 YIPF6Q96EC8 236 aa10.91□□□□□ -0.66
CMTM4-203ENST00000561680 REEP6Q96HR9 211 aa10.91□□□□□ -0.66
CMTM4-203ENST00000561680 BCL2L14Q9BZR8 327 aa10.91□□□□□ -0.66
CMTM4-203ENST00000561680 OR51B6Q9H340 312 aa10.91□□□□□ -0.66
CMTM4-203ENST00000561680 RGCCQ9H4X1 137 aa10.91□□□□□ -0.66
CMTM4-203ENST00000561680 OPA3Q9H6K4 179 aa10.91□□□□□ -0.66
CMTM4-203ENST00000561680 SLC24A3Q9HC58 644 aa10.91□□□□□ -0.66
CMTM4-203ENST00000561680 GPR84Q9NQS5 396 aa10.91□□□□□ -0.66
CMTM4-203ENST00000561680 STARD10Q9Y365 291 aa10.91□□□□□ -0.66
CMTM4-203ENST00000561680 CACNA1DQ01668 2161 aa10.91□□□□□ -0.66
CMTM4-203ENST00000561680 COL12A1Q99715 3063 aa10.9□□□□□ -0.66
CMTM4-203ENST00000561680 HRNRQ86YZ3 2850 aaPredicted RBP10.9□□□□□ -0.66
CMTM4-203ENST00000561680 A0A1B0GTI1 187 aa10.9□□□□□ -0.66
CMTM4-203ENST00000561680 P2RY10O00398 339 aa10.9□□□□□ -0.66
CMTM4-203ENST00000561680 CASKO14936 926 aa10.9□□□□□ -0.66
CMTM4-203ENST00000561680 CLDN1O95832 211 aa10.9□□□□□ -0.66
CMTM4-203ENST00000561680 CD3EP07766 207 aa10.9□□□□□ -0.66
CMTM4-203ENST00000561680 CD36P16671 472 aa10.9□□□□□ -0.66
CMTM4-203ENST00000561680 TUBG1P23258 451 aa10.9□□□□□ -0.66
CMTM4-203ENST00000561680 PSMA1P25786 263 aaKnown RBP10.9□□□□□ -0.66
CMTM4-203ENST00000561680 TTKP33981 857 aa10.9□□□□□ -0.66
CMTM4-203ENST00000561680 ERVS71-1P61550 626 aa10.9□□□□□ -0.66
CMTM4-203ENST00000561680 RPS11P62280 158 aaKnown RBP eCLIP10.9□□□□□ -0.66
CMTM4-203ENST00000561680 ZNF92Q03936 586 aa10.9□□□□□ -0.66
CMTM4-203ENST00000561680 MALLQ13021 153 aa10.9□□□□□ -0.66
CMTM4-203ENST00000561680 SNTB2Q13425 540 aaKnown RBP10.9□□□□□ -0.66
CMTM4-203ENST00000561680 TRAM1Q15629 374 aa10.9□□□□□ -0.66
CMTM4-203ENST00000561680 GFOD2Q3B7J2 385 aa10.9□□□□□ -0.66
CMTM4-203ENST00000561680 YIF1BQ5BJH7 314 aa10.9□□□□□ -0.66
CMTM4-203ENST00000561680 FBXW12Q6X9E4 464 aa10.9□□□□□ -0.66
CMTM4-203ENST00000561680 MEX3BQ6ZN04 569 aaKnown RBP10.9□□□□□ -0.66
CMTM4-203ENST00000561680 Q6ZSR3 168 aa10.9□□□□□ -0.66
CMTM4-203ENST00000561680 GPR141Q7Z602 305 aa10.9□□□□□ -0.66
CMTM4-203ENST00000561680 RDH10Q8IZV5 341 aa10.9□□□□□ -0.66
CMTM4-203ENST00000561680 PLPP7Q8NBV4 271 aa10.9□□□□□ -0.66
CMTM4-203ENST00000561680 NUP37Q8NFH4 326 aa10.9□□□□□ -0.66
CMTM4-203ENST00000561680 OR1J1Q8NGS3 322 aa10.9□□□□□ -0.66
CMTM4-203ENST00000561680 OR13C5Q8NGS8 318 aa10.9□□□□□ -0.66
CMTM4-203ENST00000561680 OR10AC1Q8NH08 325 aa10.9□□□□□ -0.66
CMTM4-203ENST00000561680 AKAP1Q92667 903 aaKnown RBP eCLIP10.9□□□□□ -0.66
CMTM4-203ENST00000561680 SGK3Q96BR1 496 aa10.9□□□□□ -0.66
CMTM4-203ENST00000561680 TMED9Q9BVK6 235 aa10.9□□□□□ -0.66
CMTM4-203ENST00000561680 TUBG2Q9NRH3 451 aa10.9□□□□□ -0.66
CMTM4-203ENST00000561680 PTTG3PQ9NZH4 202 aa10.9□□□□□ -0.66
CMTM4-203ENST00000561680 HHLA2Q9UM44 414 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms