RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 MCHR2Q969V1 340 aa7.12□□□□□ -1.27
PALB2-202ENST00000561514 ASB9Q96DX5 294 aa7.12□□□□□ -1.27
PALB2-202ENST00000561514 SGTBQ96EQ0 304 aa7.12□□□□□ -1.27
PALB2-202ENST00000561514 ELMOD3Q96FG2 381 aa7.12□□□□□ -1.27
PALB2-202ENST00000561514 MARS2Q96GW9 593 aaKnown RBP7.12□□□□□ -1.27
PALB2-202ENST00000561514 RNF170Q96K19 258 aa7.12□□□□□ -1.27
PALB2-202ENST00000561514 POM121L2Q96KW2 1035 aa7.12□□□□□ -1.27
PALB2-202ENST00000561514 C12orf57Q99622 126 aa7.12□□□□□ -1.27
PALB2-202ENST00000561514 KCTD14Q9BQ13 255 aaPredicted RBP7.12□□□□□ -1.27
PALB2-202ENST00000561514 ADI1Q9BV57 179 aa7.12□□□□□ -1.27
PALB2-202ENST00000561514 POLR2J2Q9GZM3 115 aaKnown RBP7.12□□□□□ -1.27
PALB2-202ENST00000561514 POLR2J3Q9H1A7 115 aaKnown RBP7.12□□□□□ -1.27
PALB2-202ENST00000561514 KAT8Q9H7Z6 458 aaKnown RBP7.12□□□□□ -1.27
PALB2-202ENST00000561514 SAP30LQ9HAJ7 183 aa7.12□□□□□ -1.27
PALB2-202ENST00000561514 CCDC167Q9P0B6 97 aa7.12□□□□□ -1.27
PALB2-202ENST00000561514 CGGBP1Q9UFW8 167 aaPredicted RBP7.12□□□□□ -1.27
PALB2-202ENST00000561514 KCNK7Q9Y2U2 307 aa7.12□□□□□ -1.27
PALB2-202ENST00000561514 PRKDCP78527 4128 aaKnown RBP7.11□□□□□ -1.27
PALB2-202ENST00000561514 LOC100509620A0A075B734 347 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 IQCMA0A1B0GVH7 501 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 CPSF4LA6NMK7 179 aaKnown RBP7.11□□□□□ -1.27
PALB2-202ENST00000561514 A8MXK9 166 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 CDC14BO60729 498 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 IGHV1-46P01743 117 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 C1QBP02746 253 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 MT-ND1P03886 318 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 MT-ND5P03915 603 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 OPN1SWP03999 348 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 LCKP06239 509 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 CDK1P06493 297 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 HKR1P10072 659 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 CCL2P13500 99 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 RAB4AP20338 218 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 S100PP25815 95 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 PCGF2P35227 344 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 ETV6P41212 452 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 MEOX2P50222 304 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 DAP3P51398 398 aaKnown RBP7.11□□□□□ -1.27
PALB2-202ENST00000561514 ZNF84P51523 738 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 MVKQ03426 396 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 PLP2Q04941 152 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 RPL18Q07020 188 aaKnown RBP7.11□□□□□ -1.27
PALB2-202ENST00000561514 SLC3A1Q07837 685 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 ALKBH6Q3KRA9 238 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 SLC36A3Q495N2 470 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 ARMCX4Q5H9R4 360 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 PABPC1L2AQ5JQF8 200 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 CLLU1Q5K131 121 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 AVPI1Q5T686 147 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 DCAF12L2Q5VW00 463 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 DOK3Q7L591 496 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 KRT74Q7RTS7 529 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 ZNF101Q8IZC7 436 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 C3orf56Q8N813 242 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 DEFB108BQ8NET1 73 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 NANPQ8TBE9 248 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 RAB1CQ92928 201 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 CCDC124Q96CT7 223 aaKnown RBP7.11□□□□□ -1.27
PALB2-202ENST00000561514 LRRC58Q96CX6 371 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 TIMD4Q96H15 378 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 ST6GAL2Q96JF0 529 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 SLC6A7Q99884 636 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 PKP2Q99959 881 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 ZNF747Q9BV97 191 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 ZMAT3Q9HA38 289 aaKnown RBP7.11□□□□□ -1.27
PALB2-202ENST00000561514 CYSLTR2Q9NS75 346 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 MED9Q9NWA0 146 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 PLA2G2EQ9NZK7 142 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.11□□□□□ -1.27
PALB2-202ENST00000561514 CYB5R1Q9UHQ9 305 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 LEF1Q9UJU2 399 aaPredicted RBP7.11□□□□□ -1.27
PALB2-202ENST00000561514 SLC7A7Q9UM01 511 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 MRPS7Q9Y2R9 242 aaKnown RBP7.11□□□□□ -1.27
PALB2-202ENST00000561514 PCDHGB1Q9Y5G3 927 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 SNX5Q9Y5X3 404 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 WNK2Q9Y3S1 2297 aa7.11□□□□□ -1.27
PALB2-202ENST00000561514 IGKV1D-43A0A0B4J1Z2 117 aa7.1□□□□□ -1.27
PALB2-202ENST00000561514 F5H0A9 414 aaPredicted RBP7.1□□□□□ -1.27
PALB2-202ENST00000561514 I3L521 148 aa7.1□□□□□ -1.27
PALB2-202ENST00000561514 PRSS23O95084 383 aa7.1□□□□□ -1.27
PALB2-202ENST00000561514 IGHV2-70P01814 119 aa7.1□□□□□ -1.27
PALB2-202ENST00000561514 IGHMP01871 453 aa7.1□□□□□ -1.27
PALB2-202ENST00000561514 HSMCR30P0CW71 290 aa7.1□□□□□ -1.27
PALB2-202ENST00000561514 THRBP10828 461 aa7.1□□□□□ -1.27
PALB2-202ENST00000561514 NR2C1P13056 603 aa7.1□□□□□ -1.27
PALB2-202ENST00000561514 COX4I1P13073 169 aa7.1□□□□□ -1.27
PALB2-202ENST00000561514 ZNF32P17041 273 aa7.1□□□□□ -1.27
PALB2-202ENST00000561514 MAKP20794 623 aa7.1□□□□□ -1.27
PALB2-202ENST00000561514 C4BPBP20851 252 aa7.1□□□□□ -1.27
PALB2-202ENST00000561514 EEF1B2P24534 225 aaKnown RBP7.1□□□□□ -1.27
PALB2-202ENST00000561514 STOMP27105 288 aa7.1□□□□□ -1.27
PALB2-202ENST00000561514 HLA-DMAP28067 261 aa7.1□□□□□ -1.27
PALB2-202ENST00000561514 APLNRP35414 380 aa7.1□□□□□ -1.27
PALB2-202ENST00000561514 LIPAP38571 399 aa7.1□□□□□ -1.27
PALB2-202ENST00000561514 MPV17P39210 176 aa7.1□□□□□ -1.27
PALB2-202ENST00000561514 CAPGP40121 348 aa7.1□□□□□ -1.27
PALB2-202ENST00000561514 ZNF81P51508 661 aa7.1□□□□□ -1.27
PALB2-202ENST00000561514 CLRN1P58418 232 aa7.1□□□□□ -1.27
PALB2-202ENST00000561514 MTPNP58546 118 aa7.1□□□□□ -1.27
PALB2-202ENST00000561514 ZNF273Q14593 569 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms