RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	THBS2	P35442	1172 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	SOX2	P48431	317 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	CX3CR1	P49238	355 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	ZNF121	P58317	390 aa	Predicted RBP	6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	PCBD1	P61457	104 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	PPP3R1	P63098	170 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	RAB35	Q15286	201 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	ACSF3	Q4G176	576 aa	Predicted RBP	6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	CCDC92	Q53HC0	331 aa	Predicted RBP	6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	CEP78	Q5JTW2	689 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	SPANXN2	Q5MJ10	180 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	ELFN2	Q5R3F8	820 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	TMEM244	Q5VVB8	128 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	GFRAL	Q6UXV0	394 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	ZNF813	Q6ZN06	617 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	ZNF627	Q7L945	461 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	P4HA3	Q7Z4N8	544 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	BTLA	Q7Z6A9	289 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	FGD2	Q7Z6J4	655 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	SYT9	Q86SS6	491 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	ZNF100	Q8IYN0	542 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	ELMOD2	Q8IZ81	293 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	OR5M9	Q8NGP3	310 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	TSEN15	Q8WW01	171 aa	Known RBP	6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	ACOT12	Q8WYK0	555 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	PPP1R14A	Q96A00	147 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	TMEM106A	Q96A25	262 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	APH1A	Q96BI3	265 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	ORAI1	Q96D31	301 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	FBXO17	Q96EF6	278 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	TRIB1	Q96RU8	372 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	GFI1	Q99684	422 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	KCNJ15	Q99712	375 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	SH3GL3	Q99963	347 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	WAC	Q9BTA9	647 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	HDHD2	Q9H0R4	259 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	GSX1	Q9H4S2	264 aa	Predicted RBP	6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	ZCCHC4	Q9H5U6	513 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	ABCB9	Q9NP78	766 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	GLRX2	Q9NS18	164 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	MALT1	Q9UDY8	824 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	HHLA2	Q9UM44	414 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	DHDH	Q9UQ10	334 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	FREM1	Q5H8C1	2179 aa		6.57	□□□□□ -1.36
TPM1-231	ENST00000561395	DOCK7	Q96N67	2140 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	FN1	P02751	2386 aa	Known RBP	6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	TRAV8-7	A0A075B6U6	113 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	OR6C6	A6NF89	314 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395		H3BSH0	61 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	P2RY10	O00398	339 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	CCL21	O00585	134 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	SIAH2	O43255	324 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	ZNHIT1	O43257	154 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	SGCE	O43556	437 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	SYNGR3	O43761	229 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	DOK2	O60496	412 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	TTR	P02766	147 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	CD2	P06729	351 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	EPX	P11678	715 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	ZNF32	P17041	273 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	ADRA2C	P18825	462 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	ATF1	P18846	271 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	AGA	P20933	346 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	APEX1	P27695	318 aa	Known RBP	6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	CD40LG	P29965	261 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	TNFSF8	P32971	234 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	OR3A2	P47893	321 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	PRKX	P51817	358 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	TDGF1P3	P51864	188 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	ARF1	P84077	181 aa	Known RBP	6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	ZNF45	Q02386	682 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	SCRN3	Q0VDG4	424 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	ECH1	Q13011	328 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	GUSBP1	Q15486	140 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	SLC25A35	Q3KQZ1	300 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	KRTAP27-1	Q3LI81	207 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	IDNK	Q5T6J7	187 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	ZNF774	Q6NX45	483 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	MZT2A	Q6P582	158 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	C16orf87	Q6PH81	154 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	SLC16A14	Q7RTX9	510 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	ABHD12B	Q7Z5M8	362 aa	Predicted RBP	6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	LRRTM1	Q86UE6	522 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	TGIF2LY	Q8IUE0	185 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	SKA3	Q8IX90	412 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	PARP16	Q8N5Y8	322 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	ZNF283	Q8N7M2	679 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	OR8B12	Q8NGG6	310 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	OR13C3	Q8NGS6	347 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	ASB5	Q8WWX0	329 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	SPTSSA	Q969W0	71 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	CEP19	Q96LK0	163 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	GPR137	Q96N19	417 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	SLC30A2	Q9BRI3	323 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	SLITRK2	Q9H156	845 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	WNT5B	Q9H1J7	359 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	TCF7L1	Q9HCS4	588 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	BRD7	Q9NPI1	651 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	PLEK2	Q9NYT0	353 aa		6.56	□□□□□ -1.36
TPM1-231	ENST00000561395	COQ3	Q9NZJ6	369 aa		6.56	□□□□□ -1.36

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