RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	GINS2	Q9Y248	185 aa		3.78	□□□□□ -1.8
TCF12-223	ENST00000561235	ARL2BP	Q9Y2Y0	163 aa		3.78	□□□□□ -1.8
TCF12-223	ENST00000561235	ASB4	Q9Y574	426 aa		3.78	□□□□□ -1.8
TCF12-223	ENST00000561235	DMD	P11532	3685 aa		3.78	□□□□□ -1.8
TCF12-223	ENST00000561235	GBF1	Q92538	1859 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	TRIO	O75962	3097 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	ZNF532	Q9HCE3	1301 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	TRBV11-1	A0A0K0K1C0	115 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	ZNF98	A6NK75	572 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235		A8MXQ7	604 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235		H7C0C1	242 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	TXNDC9	O14530	226 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	EMC8	O43402	210 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	PRKAB2	O43741	272 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	MMP23A	O75900	390 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	DCTN3	O75935	186 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	ANXA5	P08758	320 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	CCNB1	P14635	433 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	RAB3A	P20336	220 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	FUT3	P21217	361 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	PTN	P21246	168 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	CALCR	P30988	508 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	SHMT2	P34897	504 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	UGT1A5	P35504	534 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	RPL5	P46777	297 aa	Known RBP	3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	NOV	P48745	357 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	KLK7	P49862	253 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	TPMT	P51580	245 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	ATP1B3	P54709	279 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	APOC4	P55056	127 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	AP1S1	P61966	158 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	RAB11A	P62491	216 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	SKP1	P63208	163 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	FLI1	Q01543	452 aa	Predicted RBP	3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	CKAP4	Q07065	602 aa	Known RBP	3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	PMS2P3	Q13401	168 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	DGCR6	Q14129	220 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	FLOT2	Q14254	428 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	RAB11B	Q15907	218 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	UAP1	Q16222	522 aa	Predicted RBP	3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	DUSP7	Q16829	419 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	CARD16	Q5EG05	197 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	OR2A2	Q6IF42	318 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	XKRX	Q6PP77	449 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	UQCC3	Q6UW78	93 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	IL34	Q6ZMJ4	242 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	PGAP1	Q75T13	922 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	HORMAD1	Q86X24	394 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	ENTHD1	Q8IYW4	607 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	FTMT	Q8N4E7	242 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	OR4K14	Q8NGD5	310 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	OR52H1	Q8NGJ2	320 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	FAM110B	Q8TC76	370 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	ELMO1	Q92556	727 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	UBE2E3	Q969T4	207 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	PANX2	Q96RD6	677 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	KIFC1	Q9BW19	673 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	ANKRD60	Q9BZ19	345 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	RAB34	Q9BZG1	259 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	ZDHHC11	Q9H8X9	412 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	FGFR1OP2	Q9NVK5	253 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	KIF25	Q9UIL4	384 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	IKZF2	Q9UKS7	526 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	COPS3	Q9UNS2	423 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235		V9GY05	133 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	CEP250	Q9BV73	2442 aa		3.77	□□□□□ -1.81
TCF12-223	ENST00000561235	GCN1	Q92616	2671 aa	Known RBP	3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	NAV1	Q8NEY1	1877 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	TCRBV9S1A1T	A0A576	114 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	OR6C70	A6NIJ9	312 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235		A6NIZ1	184 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	ERVV-1	B6SEH8	477 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235		F8W036	122 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235		H0YJX3	145 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	PGRMC1	O00264	195 aa	Known RBP	3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	TOR1A	O14656	332 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	CLOCK	O15516	846 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	CCDC22	O60826	627 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	ZNF780A	O75290	641 aa	Predicted RBP	3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	SUPT7L	O94864	414 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	CDK14	O94921	469 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	SEMA3D	O95025	777 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	NSA2	O95478	260 aa	Known RBP	3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	H6PD	O95479	791 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	CLDN9	O95484	217 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	ACTL6A	O96019	429 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	GLA	P06280	429 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	DNAH10OS	P0CZ25	163 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	GTF2H1	P32780	548 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	SERPINB5	P36952	375 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	RPS5	P46782	204 aa	Known RBP	3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	DUSP3	P51452	185 aa	Predicted RBP	3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	CEBPG	P53567	150 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	RAP1B	P61224	184 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	NAA20	P61599	178 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	GNB2	P62879	340 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	TGFBR3	Q03167	851 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	GLO1	Q04760	184 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	TGFBI	Q15582	683 aa		3.76	□□□□□ -1.81
TCF12-223	ENST00000561235	KCNJ8	Q15842	424 aa		3.76	□□□□□ -1.81

Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms