RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 ZNF532Q9HCE3 1301 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 FHOD3Q2V2M9 1422 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 ARID2Q68CP9 1835 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 IGHV3OR16-13A0A075B7E8 117 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 IGHV3-20A0A0C4DH32 117 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 IGHV3-38A0A0C4DH36 116 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 A0A0G2JLM5 398 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 SLC5A10A0PJK1 596 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 FAM172BPA6NC97 362 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 ZNF726A6NNF4 738 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 F5H5K5 113 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 F5H5T6 163 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 F5H768 121 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 I3L4J1 428 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 M0R1B8 84 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 PSMD12O00232 456 aaPredicted RBP1.66□□□□□ -2.14
RTF1-207ENST00000561076 XKRYO14609 159 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 CDX4O14627 284 aaPredicted RBP1.66□□□□□ -2.14
RTF1-207ENST00000561076 BIRC5O15392 142 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 UGT2B11O75310 529 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 NXPH4O95158 308 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 SNAPINO95295 136 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 NADKO95544 446 aaPredicted RBP1.66□□□□□ -2.14
RTF1-207ENST00000561076 CLDN1O95832 211 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 IFNA14P01570 189 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 IGHV3-9P01782 118 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 IGHG1P01857 330 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 MT-ND4P03905 459 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 IFNA16P05015 189 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 BCHEP06276 602 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 CDK1P06493 297 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 EIF4EP06730 217 aaKnown RBP1.66□□□□□ -2.14
RTF1-207ENST00000561076 CELA2AP08217 269 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 MRPL3P09001 348 aaKnown RBP1.66□□□□□ -2.14
RTF1-207ENST00000561076 MMP7P09237 267 aaPredicted RBP1.66□□□□□ -2.14
RTF1-207ENST00000561076 GIPP09681 153 aaPredicted RBP1.66□□□□□ -2.14
RTF1-207ENST00000561076 CSF3P09919 207 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 OR4E1P0C645 316 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 GKN3PP0CG01 181 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 CCDC166P0CW27 439 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 ERGP11308 486 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 CD99P14209 185 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 RAB3BP20337 219 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 USF1P22415 310 aaPredicted RBP1.66□□□□□ -2.14
RTF1-207ENST00000561076 CCNE1P24864 410 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 PSMA1P25786 263 aaKnown RBP1.66□□□□□ -2.14
RTF1-207ENST00000561076 CD38P28907 300 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 GRPRP30550 384 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 GNRHRP30968 328 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 PFN2P35080 140 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 TALDO1P37837 337 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 COILP38432 576 aaPredicted RBP1.66□□□□□ -2.14
RTF1-207ENST00000561076 KLK7P49862 253 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 ERFP50548 548 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 FABP6P51161 128 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 AQP5P55064 265 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 TCL1AP56279 114 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 DSCR9P59020 149 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 HILS1P60008 231 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 ERVFC1-1P60608 527 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 ACTBP60709 375 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 RAB4BP61018 213 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 CXCR4P61073 352 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 PPP1CBP62140 327 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 RPS14P62263 151 aaKnown RBP1.66□□□□□ -2.14
RTF1-207ENST00000561076 POLR2GP62487 172 aaKnown RBP eCLIP1.66□□□□□ -2.14
RTF1-207ENST00000561076 ACTG1P63261 375 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 CCL7P80098 99 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 SEMG2Q02383 582 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 FCHO2Q0JRZ9 810 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 CDC20Q12834 499 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 SRSF6Q13247 344 aaKnown RBP1.66□□□□□ -2.14
RTF1-207ENST00000561076 AQP6Q13520 282 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 PDK2Q15119 407 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 TGIF1Q15583 401 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 SLC25A35Q3KQZ1 300 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 COA6Q5JTJ3 125 aaKnown RBP1.66□□□□□ -2.14
RTF1-207ENST00000561076 PAGE3Q5JUK9 113 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 HACD4Q5VWC8 232 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 ANKRD22Q5VYY1 191 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 TRIQKQ629K1 86 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 TNFAIP8L2Q6P589 184 aaPredicted RBP1.66□□□□□ -2.14
RTF1-207ENST00000561076 SPSB3Q6PJ21 355 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 DNM1P34Q6PK57 102 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 ZNF620Q6ZNG0 422 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 RASSF6Q6ZTQ3 369 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 C9orf139Q6ZV77 190 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 H2AFVQ71UI9 128 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 THOC6Q86W42 341 aaKnown RBP1.66□□□□□ -2.14
RTF1-207ENST00000561076 CDC20BQ86Y33 519 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 WDFY1Q8IWB7 410 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 SKA3Q8IX90 412 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 C9orf40Q8IXQ3 194 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 PIANPQ8IYJ0 282 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 RDH10Q8IZV5 341 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 STK40Q8N2I9 435 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 PNKDQ8N490 385 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 TMEM252Q8N6L7 170 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 LRRC52Q8N7C0 313 aa1.66□□□□□ -2.14
RTF1-207ENST00000561076 HSD17B11Q8NBQ5 300 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms