RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 F5H5P2 479 aa11.83□□□□□ -0.52
TPM1-223ENST00000560445 PHYHO14832 338 aa11.83□□□□□ -0.52
TPM1-223ENST00000560445 NDUFA2O43678 99 aa11.83□□□□□ -0.52
TPM1-223ENST00000560445 GPANK1O95872 356 aa11.83□□□□□ -0.52
TPM1-223ENST00000560445 FSHBP01225 129 aa11.83□□□□□ -0.52
TPM1-223ENST00000560445 ATP6V1B2P21281 511 aa11.83□□□□□ -0.52
TPM1-223ENST00000560445 PYCR1P32322 319 aa11.83□□□□□ -0.52
TPM1-223ENST00000560445 GRK5P34947 590 aa11.83□□□□□ -0.52
TPM1-223ENST00000560445 MTNR1AP48039 350 aa11.83□□□□□ -0.52
TPM1-223ENST00000560445 COMPP49747 757 aaPredicted RBP11.83□□□□□ -0.52
TPM1-223ENST00000560445 SRSF2Q01130 221 aaKnown RBP11.83□□□□□ -0.52
TPM1-223ENST00000560445 ZNF404Q494X3 552 aa11.83□□□□□ -0.52
TPM1-223ENST00000560445 OTPQ5XKR4 325 aa11.83□□□□□ -0.52
TPM1-223ENST00000560445 CD276Q5ZPR3 534 aa11.83□□□□□ -0.52
TPM1-223ENST00000560445 ZNF770Q6IQ21 691 aaPredicted RBP11.83□□□□□ -0.52
TPM1-223ENST00000560445 C1orf229Q6ZS94 237 aaPredicted RBP11.83□□□□□ -0.52
TPM1-223ENST00000560445 RHOUQ7L0Q8 258 aa11.83□□□□□ -0.52
TPM1-223ENST00000560445 DCXRQ7Z4W1 244 aa11.83□□□□□ -0.52
TPM1-223ENST00000560445 CYB561A3Q8NBI2 242 aa11.83□□□□□ -0.52
TPM1-223ENST00000560445 SLC37A3Q8NCC5 494 aa11.83□□□□□ -0.52
TPM1-223ENST00000560445 OR6K6Q8NGW6 343 aa11.83□□□□□ -0.52
TPM1-223ENST00000560445 SLCO4A1Q96BD0 722 aa11.83□□□□□ -0.52
TPM1-223ENST00000560445 KCNJ15Q99712 375 aa11.83□□□□□ -0.52
TPM1-223ENST00000560445 SLC6A7Q99884 636 aa11.83□□□□□ -0.52
TPM1-223ENST00000560445 ADAT1Q9BUB4 502 aaKnown RBP11.83□□□□□ -0.52
TPM1-223ENST00000560445 PNRC2Q9NPJ4 139 aaKnown RBP11.83□□□□□ -0.52
TPM1-223ENST00000560445 MRPL22Q9NWU5 206 aaKnown RBP11.83□□□□□ -0.52
TPM1-223ENST00000560445 CLN8Q9UBY8 286 aa11.83□□□□□ -0.52
TPM1-223ENST00000560445 ANKRD30BLA7E2S9 258 aa11.82□□□□□ -0.52
TPM1-223ENST00000560445 CD300LBA8K4G0 201 aa11.82□□□□□ -0.52
TPM1-223ENST00000560445 H3BN98 237 aa11.82□□□□□ -0.52
TPM1-223ENST00000560445 GNGT2O14610 69 aa11.82□□□□□ -0.52
TPM1-223ENST00000560445 MLNRO43193 412 aa11.82□□□□□ -0.52
TPM1-223ENST00000560445 GASTP01350 101 aa11.82□□□□□ -0.52
TPM1-223ENST00000560445 WNT2P09544 360 aa11.82□□□□□ -0.52
TPM1-223ENST00000560445 HSD11B1P28845 292 aa11.82□□□□□ -0.52
TPM1-223ENST00000560445 OTX1P32242 354 aaPredicted RBP11.82□□□□□ -0.52
TPM1-223ENST00000560445 PITPNBP48739 271 aa11.82□□□□□ -0.52
TPM1-223ENST00000560445 ERFP50548 548 aa11.82□□□□□ -0.52
TPM1-223ENST00000560445 BPIFB3P59826 476 aa11.82□□□□□ -0.52
TPM1-223ENST00000560445 CRMP1Q14194 572 aa11.82□□□□□ -0.52
TPM1-223ENST00000560445 PCK2Q16822 640 aa11.82□□□□□ -0.52
TPM1-223ENST00000560445 C11orf91Q3C1V1 193 aa11.82□□□□□ -0.52
TPM1-223ENST00000560445 DNAL1Q4LDG9 190 aa11.82□□□□□ -0.52
TPM1-223ENST00000560445 SPRNQ5BIV9 151 aa11.82□□□□□ -0.52
TPM1-223ENST00000560445 LCE2DQ5TA82 110 aaPredicted RBP11.82□□□□□ -0.52
TPM1-223ENST00000560445 SHFQ7M4L6 423 aa11.82□□□□□ -0.52
TPM1-223ENST00000560445 C3orf56Q8N813 242 aa11.82□□□□□ -0.52
TPM1-223ENST00000560445 DEFB108BQ8NET1 73 aa11.82□□□□□ -0.52
TPM1-223ENST00000560445 OR10G2Q8NGC3 310 aa11.82□□□□□ -0.52
TPM1-223ENST00000560445 OR52H1Q8NGJ2 320 aa11.82□□□□□ -0.52
TPM1-223ENST00000560445 SLAMF6Q96DU3 332 aa11.82□□□□□ -0.52
TPM1-223ENST00000560445 MAP6Q96JE9 813 aa11.82□□□□□ -0.52
TPM1-223ENST00000560445 RGCCQ9H4X1 137 aa11.82□□□□□ -0.52
TPM1-223ENST00000560445 WDR76Q9H967 626 aa11.82□□□□□ -0.52
TPM1-223ENST00000560445 TMEM165Q9HC07 324 aa11.82□□□□□ -0.52
TPM1-223ENST00000560445 CMC2Q9NRP2 79 aa11.82□□□□□ -0.52
TPM1-223ENST00000560445 RNF7Q9UBF6 113 aa11.82□□□□□ -0.52
TPM1-223ENST00000560445 OPN4Q9UHM6 478 aa11.82□□□□□ -0.52
TPM1-223ENST00000560445 TCRBV5S2A0A599 114 aa11.81□□□□□ -0.52
TPM1-223ENST00000560445 TMEM89A2RUT3 159 aa11.81□□□□□ -0.52
TPM1-223ENST00000560445 AQP12BA6NM10 295 aa11.81□□□□□ -0.52
TPM1-223ENST00000560445 ZNF593O00488 134 aaPredicted RBP11.81□□□□□ -0.52
TPM1-223ENST00000560445 CYB5R3P00387 301 aaPredicted RBP11.81□□□□□ -0.52
TPM1-223ENST00000560445 CST1P01037 141 aa11.81□□□□□ -0.52
TPM1-223ENST00000560445 AVPP01185 164 aa11.81□□□□□ -0.52
TPM1-223ENST00000560445 SPI1P17947 270 aa11.81□□□□□ -0.52
TPM1-223ENST00000560445 ZFP36P26651 326 aaKnown RBP11.81□□□□□ -0.52
TPM1-223ENST00000560445 RSPO1Q2MKA7 263 aaPredicted RBP11.81□□□□□ -0.52
TPM1-223ENST00000560445 DOK3Q7L591 496 aa11.81□□□□□ -0.52
TPM1-223ENST00000560445 AQP12AQ8IXF9 295 aa11.81□□□□□ -0.52
TPM1-223ENST00000560445 OR9Q1Q8NGQ5 310 aa11.81□□□□□ -0.52
TPM1-223ENST00000560445 BCAS4Q8TDM0 211 aa11.81□□□□□ -0.52
TPM1-223ENST00000560445 GIPC3Q8TF64 312 aa11.81□□□□□ -0.52
TPM1-223ENST00000560445 RAB40AQ8WXH6 277 aa11.81□□□□□ -0.52
TPM1-223ENST00000560445 ITFG2Q969R8 447 aa11.81□□□□□ -0.52
TPM1-223ENST00000560445 CCDC124Q96CT7 223 aaKnown RBP11.81□□□□□ -0.52
TPM1-223ENST00000560445 INTS14Q96SY0 518 aa11.81□□□□□ -0.52
TPM1-223ENST00000560445 THTPAQ9BU02 230 aa11.81□□□□□ -0.52
TPM1-223ENST00000560445 PLA2G12AQ9BZM1 189 aa11.81□□□□□ -0.52
TPM1-223ENST00000560445 MS4A7Q9GZW8 240 aaPredicted RBP11.81□□□□□ -0.52
TPM1-223ENST00000560445 ABCB9Q9NP78 766 aa11.81□□□□□ -0.52
TPM1-223ENST00000560445 CENPMQ9NSP4 180 aa11.81□□□□□ -0.52
TPM1-223ENST00000560445 DCAF16Q9NXF7 216 aa11.81□□□□□ -0.52
TPM1-223ENST00000560445 TAS2R1Q9NYW7 299 aa11.81□□□□□ -0.52
TPM1-223ENST00000560445 U3KQV3 271 aa11.81□□□□□ -0.52
TPM1-223ENST00000560445 TRAV38-1A0A0B4J264 116 aa11.8□□□□□ -0.52
TPM1-223ENST00000560445 IGHV2-70DA0A0C4DH43 119 aa11.8□□□□□ -0.52
TPM1-223ENST00000560445 TVP23AA6NH52 213 aa11.8□□□□□ -0.52
TPM1-223ENST00000560445 GYG2O15488 501 aa11.8□□□□□ -0.52
TPM1-223ENST00000560445 ENSAO43768 121 aaKnown RBP11.8□□□□□ -0.52
TPM1-223ENST00000560445 E2F6O75461 281 aa11.8□□□□□ -0.52
TPM1-223ENST00000560445 TIPRLO75663 272 aa11.8□□□□□ -0.52
TPM1-223ENST00000560445 SOX14O95416 240 aa11.8□□□□□ -0.52
TPM1-223ENST00000560445 HMGN1P05114 100 aa11.8□□□□□ -0.52
TPM1-223ENST00000560445 LIPFP07098 398 aa11.8□□□□□ -0.52
TPM1-223ENST00000560445 T-ENOLP0DO92 83 aa11.8□□□□□ -0.52
TPM1-223ENST00000560445 CA6P23280 308 aa11.8□□□□□ -0.52
TPM1-223ENST00000560445 MS4A2Q01362 244 aa11.8□□□□□ -0.52
TPM1-223ENST00000560445 FOXL1Q12952 345 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms