RNA–Protein interactions for RNA: ENST00000560260.5

SNX1-210, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 1,326 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-210ENST00000560260 ZCCHC24Q8N2G6 241 aaKnown RBP18.62■□□□□ 0.57
SNX1-210ENST00000560260 YIPF7Q8N8F6 280 aa18.62■□□□□ 0.57
SNX1-210ENST00000560260 OR5L1Q8NGL2 311 aa18.62■□□□□ 0.57
SNX1-210ENST00000560260 SNX33Q8WV41 574 aa18.62■□□□□ 0.57
SNX1-210ENST00000560260 HAVCR1Q96D42 359 aa18.62■□□□□ 0.57
SNX1-210ENST00000560260 MBD6Q96DN6 1003 aa18.62■□□□□ 0.57
SNX1-210ENST00000560260 PGAM5Q96HS1 289 aa18.62■□□□□ 0.57
SNX1-210ENST00000560260 PAK1IP1Q9NWT1 392 aaPredicted RBP18.62■□□□□ 0.57
SNX1-210ENST00000560260 PURGQ9UJV8 347 aaKnown RBP18.62■□□□□ 0.57
SNX1-210ENST00000560260 DIMT1Q9UNQ2 313 aaKnown RBP18.62■□□□□ 0.57
SNX1-210ENST00000560260 R4GMQ9 66 aa18.62■□□□□ 0.57
SNX1-210ENST00000560260 TMEM269A0A1B0GVZ9 245 aa18.61■□□□□ 0.57
SNX1-210ENST00000560260 NDUFS7O75251 213 aa18.61■□□□□ 0.57
SNX1-210ENST00000560260 SULT1C4O75897 302 aa18.61■□□□□ 0.57
SNX1-210ENST00000560260 RPP14O95059 124 aaKnown RBP18.61■□□□□ 0.57
SNX1-210ENST00000560260 KITLGP21583 273 aa18.61■□□□□ 0.57
SNX1-210ENST00000560260 TUBG1P23258 451 aa18.61■□□□□ 0.57
SNX1-210ENST00000560260 ETV1P50549 477 aa18.61■□□□□ 0.57
SNX1-210ENST00000560260 DEFB113Q30KQ7 82 aa18.61■□□□□ 0.57
SNX1-210ENST00000560260 OR2T2Q6IF00 324 aa18.61■□□□□ 0.57
SNX1-210ENST00000560260 RORBQ92753 470 aa18.61■□□□□ 0.57
SNX1-210ENST00000560260 PIGTQ969N2 578 aa18.61■□□□□ 0.57
SNX1-210ENST00000560260 SPSB4Q96A44 273 aa18.61■□□□□ 0.57
SNX1-210ENST00000560260 SGK3Q96BR1 496 aa18.61■□□□□ 0.57
SNX1-210ENST00000560260 SIGLEC11Q96RL6 698 aa18.61■□□□□ 0.57
SNX1-210ENST00000560260 SOX7Q9BT81 388 aa18.61■□□□□ 0.57
SNX1-210ENST00000560260 ISG20L2Q9H9L3 353 aaKnown RBP18.61■□□□□ 0.57
SNX1-210ENST00000560260 G6PC2Q9NQR9 355 aa18.61■□□□□ 0.57
SNX1-210ENST00000560260 TUBG2Q9NRH3 451 aa18.61■□□□□ 0.57
SNX1-210ENST00000560260 INPP5EQ9NRR6 644 aa18.61■□□□□ 0.57
SNX1-210ENST00000560260 ZNF701Q9NV72 531 aaPredicted RBP18.61■□□□□ 0.57
SNX1-210ENST00000560260 UBAP1Q9NZ09 502 aa18.61■□□□□ 0.57
SNX1-210ENST00000560260 CNOT2Q9NZN8 540 aaKnown RBP18.61■□□□□ 0.57
SNX1-210ENST00000560260 GNG8Q9UK08 70 aa18.61■□□□□ 0.57
SNX1-210ENST00000560260 EFCAB10A6NFE3 127 aa18.6■□□□□ 0.57
SNX1-210ENST00000560260 H7C417 338 aa18.6■□□□□ 0.57
SNX1-210ENST00000560260 LILRA1O75019 489 aa18.6■□□□□ 0.57
SNX1-210ENST00000560260 RAC2P15153 192 aa18.6■□□□□ 0.57
SNX1-210ENST00000560260 PSMB10P40306 273 aa18.6■□□□□ 0.57
SNX1-210ENST00000560260 PPOXP50336 477 aa18.6■□□□□ 0.57
SNX1-210ENST00000560260 MMP15P51511 669 aa18.6■□□□□ 0.57
SNX1-210ENST00000560260 MMP16P51512 607 aa18.6■□□□□ 0.57
SNX1-210ENST00000560260 ST3GAL4Q11206 333 aa18.6■□□□□ 0.57
SNX1-210ENST00000560260 ZNF829Q3KNS6 432 aaPredicted RBP18.6■□□□□ 0.57
SNX1-210ENST00000560260 LYZL4Q96KX0 146 aa18.6■□□□□ 0.57
SNX1-210ENST00000560260 C4orf36Q96KX1 117 aa18.6■□□□□ 0.57
SNX1-210ENST00000560260 PBOV1Q9GZY1 135 aa18.6■□□□□ 0.57
SNX1-210ENST00000560260 OR10A2Q9H208 303 aa18.6■□□□□ 0.57
SNX1-210ENST00000560260 CLEC2DQ9UHP7 191 aa18.6■□□□□ 0.57
SNX1-210ENST00000560260 IRGMA1A4Y4 181 aa18.59■□□□□ 0.57
SNX1-210ENST00000560260 ZSCAN5BA6NJL1 495 aa18.59■□□□□ 0.57
SNX1-210ENST00000560260 LOC110117498-PIK3R3F6TDL0 507 aa18.59■□□□□ 0.57
SNX1-210ENST00000560260 M0R233 179 aa18.59■□□□□ 0.57
SNX1-210ENST00000560260 XRCC2O43543 280 aa18.59■□□□□ 0.57
SNX1-210ENST00000560260 DENRO43583 198 aaKnown RBP18.59■□□□□ 0.57
SNX1-210ENST00000560260 TTRP02766 147 aa18.59■□□□□ 0.57
SNX1-210ENST00000560260 NAT2P11245 290 aa18.59■□□□□ 0.57
SNX1-210ENST00000560260 DCKP27707 260 aa18.59■□□□□ 0.57
SNX1-210ENST00000560260 PTH2RP49190 550 aa18.59■□□□□ 0.57
SNX1-210ENST00000560260 MALLQ13021 153 aa18.59■□□□□ 0.57
SNX1-210ENST00000560260 NKPD1Q17RQ9 610 aa18.59■□□□□ 0.57
SNX1-210ENST00000560260 GFOD2Q3B7J2 385 aa18.59■□□□□ 0.57
SNX1-210ENST00000560260 Q6ZR03 302 aa18.59■□□□□ 0.57
SNX1-210ENST00000560260 PGAP1Q75T13 922 aa18.59■□□□□ 0.57
SNX1-210ENST00000560260 MRPL21Q7Z2W9 205 aaKnown RBP18.59■□□□□ 0.57
SNX1-210ENST00000560260 OR5AS1Q8N127 324 aa18.59■□□□□ 0.57
SNX1-210ENST00000560260 OR52H1Q8NGJ2 320 aa18.59■□□□□ 0.57
SNX1-210ENST00000560260 PELI1Q96FA3 418 aa18.59■□□□□ 0.57
SNX1-210ENST00000560260 TMEM80Q96HE8 168 aa18.59■□□□□ 0.57
SNX1-210ENST00000560260 REEP6Q96HR9 211 aa18.59■□□□□ 0.57
SNX1-210ENST00000560260 SORCS2Q96PQ0 1159 aa18.59■□□□□ 0.57
SNX1-210ENST00000560260 REPIN1Q9BWE0 567 aaKnown RBP18.59■□□□□ 0.57
SNX1-210ENST00000560260 TPK1Q9H3S4 243 aa18.59■□□□□ 0.57
SNX1-210ENST00000560260 CXorf56Q9H5V9 222 aa18.59■□□□□ 0.57
SNX1-210ENST00000560260 DYNLRB1Q9NP97 96 aa18.59■□□□□ 0.57
SNX1-210ENST00000560260 BEX4Q9NWD9 120 aaPredicted RBP18.59■□□□□ 0.57
SNX1-210ENST00000560260 NUFIP1Q9UHK0 495 aaKnown RBP18.59■□□□□ 0.57
SNX1-210ENST00000560260 SLC22A13Q9Y226 551 aa18.59■□□□□ 0.57
SNX1-210ENST00000560260 hCG_38984A0A1B0GV85 526 aa18.58■□□□□ 0.57
SNX1-210ENST00000560260 J3QLW9 94 aa18.58■□□□□ 0.57
SNX1-210ENST00000560260 TIMM8AO60220 97 aaPredicted RBP18.58■□□□□ 0.57
SNX1-210ENST00000560260 IGLV3-1P01715 115 aa18.58■□□□□ 0.57
SNX1-210ENST00000560260 PAX1P15863 534 aa18.58■□□□□ 0.57
SNX1-210ENST00000560260 ZNF19P17023 458 aa18.58■□□□□ 0.57
SNX1-210ENST00000560260 C21orf33P30042 268 aaPredicted RBP18.58■□□□□ 0.57
SNX1-210ENST00000560260 KIR3DL2P43630 455 aa18.58■□□□□ 0.57
SNX1-210ENST00000560260 SELENOVP59797 346 aa18.58■□□□□ 0.57
SNX1-210ENST00000560260 ACTA2P62736 377 aa18.58■□□□□ 0.57
SNX1-210ENST00000560260 ACTG2P63267 376 aa18.58■□□□□ 0.57
SNX1-210ENST00000560260 TNK1Q13470 666 aa18.58■□□□□ 0.57
SNX1-210ENST00000560260 DOC2BQ14184 412 aa18.58■□□□□ 0.57
SNX1-210ENST00000560260 TIGD6Q17RP2 521 aa18.58■□□□□ 0.57
SNX1-210ENST00000560260 OR2G6Q5TZ20 316 aa18.58■□□□□ 0.57
SNX1-210ENST00000560260 FAM220AQ7Z4H9 259 aa18.58■□□□□ 0.57
SNX1-210ENST00000560260 CATSPERDQ86XM0 798 aa18.58■□□□□ 0.57
SNX1-210ENST00000560260 SYS1Q8N2H4 156 aa18.58■□□□□ 0.57
SNX1-210ENST00000560260 PRSS35Q8N3Z0 413 aa18.58■□□□□ 0.57
SNX1-210ENST00000560260 ZNF540Q8NDQ6 660 aa18.58■□□□□ 0.57
SNX1-210ENST00000560260 PERPQ96FX8 193 aa18.58■□□□□ 0.57
SNX1-210ENST00000560260 SP140LQ9H930 580 aa18.58■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms