RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 WNT5AP41221 380 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 ECI1P42126 302 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 ASCL1P50553 236 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 WNT4P56705 351 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 ZNF121P58317 390 aaPredicted RBP4.51□□□□□ -1.69
SPG11-220ENST00000559933 UBE2NP61088 152 aaKnown RBP4.51□□□□□ -1.69
SPG11-220ENST00000559933 LSM6P62312 80 aaKnown RBP4.51□□□□□ -1.69
SPG11-220ENST00000559933 RAB1AP62820 205 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 HIST1H3AP68431 136 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 TFF3Q07654 80 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 SLC3A1Q07837 685 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 TMED1Q13445 227 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 RAB35Q15286 201 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 TAF13Q15543 124 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 TIGD6Q17RP2 521 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 GSG1Q2KHT4 349 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 SNAI3Q3KNW1 292 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 DMRTC1Q5HYR2 192 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 TMEM255AQ5JRV8 349 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 TEX30Q5JUR7 227 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 ELFN2Q5R3F8 820 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 HIST2H3PS2Q5TEC6 136 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 UBE2UQ5VVX9 321 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 LIPNQ5VXI9 398 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 LIPKQ5VXJ0 399 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 ARL9Q6T311 187 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 ETV3LQ6ZN32 361 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 RFPL4BQ6ZWI9 263 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 HIST2H3AQ71DI3 136 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 FAM57BQ71RH2 274 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 ZNF627Q7L945 461 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 ZNF367Q7RTV3 350 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 ZNF101Q8IZC7 436 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 PRSS35Q8N3Z0 413 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 ZNF283Q8N7M2 679 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 IL17RDQ8NFM7 739 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 OR51A4Q8NGJ6 313 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 OR2AE1Q8NHA4 323 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 OR1F12Q8NHA8 337 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 CA5BP1Q8WTZ4 195 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 RORBQ92753 470 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 RPL3LQ92901 407 aaKnown RBP4.51□□□□□ -1.69
SPG11-220ENST00000559933 TMEM203Q969S6 136 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 TRMT61AQ96FX7 289 aaKnown RBP4.51□□□□□ -1.69
SPG11-220ENST00000559933 LYZL4Q96KX0 146 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 CCDC140Q96MF4 163 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 NKX3-1Q99801 234 aaPredicted RBP4.51□□□□□ -1.69
SPG11-220ENST00000559933 ATF6BQ99941 703 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 PDCD1LG2Q9BQ51 273 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 SPATA25Q9BR10 227 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 TMED9Q9BVK6 235 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 MND1Q9BWT6 205 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 JAM3Q9BX67 310 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 PPP1R3EQ9H7J1 279 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 FAM206AQ9NX38 181 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 COQ3Q9NZJ6 369 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 FBLN5Q9UBX5 448 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 FZR1Q9UM11 496 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 PLA2G2DQ9UNK4 145 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 ERGIC3Q9Y282 383 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 SLC25A15Q9Y619 301 aa4.51□□□□□ -1.69
SPG11-220ENST00000559933 HCFC1P51610 2035 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 HRNRQ86YZ3 2850 aaPredicted RBP4.5□□□□□ -1.69
SPG11-220ENST00000559933 ARPC4-TTLL3A0A0A6YYG9 625 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 A0A1B0GUH1 482 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 IRGMA1A4Y4 181 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 SMIM30A4D0T7 59 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 A6NIN4 97 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 ATP6V1G2-DDX39BF2Z307 99 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 C16orf97H3BN30 126 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 M0R135 149 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 P2RY10O00398 339 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 GPRIN2O60269 458 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 UBL3O95164 117 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 CLDN14O95500 239 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 CLPTM1O96005 669 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 NGFP01138 241 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 MT-ND5P03915 603 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 ANXA2P07355 339 aaKnown RBP4.5□□□□□ -1.69
SPG11-220ENST00000559933 ACSM4P0C7M7 580 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 PSMB1P20618 241 aaKnown RBP4.5□□□□□ -1.69
SPG11-220ENST00000559933 GADD45AP24522 165 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 STOMP27105 288 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 HSD11B1P28845 292 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 GUCA1AP43080 201 aaPredicted RBP4.5□□□□□ -1.69
SPG11-220ENST00000559933 SLC6A9P48067 706 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 ALDH3B2P48448 385 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 RIDAP52758 137 aaKnown RBP4.5□□□□□ -1.69
SPG11-220ENST00000559933 BLVRAP53004 296 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 SH3BGRP55822 239 aaPredicted RBP4.5□□□□□ -1.69
SPG11-220ENST00000559933 LSM3P62310 102 aaKnown RBP4.5□□□□□ -1.69
SPG11-220ENST00000559933 ACTA2P62736 377 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 ACTG2P63267 376 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 CSNK2BP67870 215 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 ROM1Q03395 351 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 SCRN3Q0VDG4 424 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 BLMHQ13867 455 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 P2RY6Q15077 328 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 CDK5R1Q15078 307 aa4.5□□□□□ -1.69
SPG11-220ENST00000559933 PPA1Q15181 289 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms