RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 TP53I3Q53FA7 332 aa18.55■□□□□ 0.56
SNX1-206ENST00000559389 LIPNQ5VXI9 398 aa18.55■□□□□ 0.56
SNX1-206ENST00000559389 MRPL21Q7Z2W9 205 aaKnown RBP18.55■□□□□ 0.56
SNX1-206ENST00000559389 OR8B12Q8NGG6 310 aa18.55■□□□□ 0.56
SNX1-206ENST00000559389 OR2AE1Q8NHA4 323 aa18.55■□□□□ 0.56
SNX1-206ENST00000559389 GGHQ92820 318 aa18.55■□□□□ 0.56
SNX1-206ENST00000559389 SPSB4Q96A44 273 aa18.55■□□□□ 0.56
SNX1-206ENST00000559389 HAVCR1Q96D42 359 aa18.55■□□□□ 0.56
SNX1-206ENST00000559389 CMBLQ96DG6 245 aa18.55■□□□□ 0.56
SNX1-206ENST00000559389 MRPL48Q96GC5 212 aaKnown RBP18.55■□□□□ 0.56
SNX1-206ENST00000559389 OPA3Q9H6K4 179 aa18.55■□□□□ 0.56
SNX1-206ENST00000559389 DYNLRB1Q9NP97 96 aa18.55■□□□□ 0.56
SNX1-206ENST00000559389 ACOXLQ9NUZ1 547 aa18.55■□□□□ 0.56
SNX1-206ENST00000559389 TAAR3PQ9P1P4 343 aa18.55■□□□□ 0.56
SNX1-206ENST00000559389 PURGQ9UJV8 347 aaKnown RBP18.55■□□□□ 0.56
SNX1-206ENST00000559389 GNG8Q9UK08 70 aa18.55■□□□□ 0.56
SNX1-206ENST00000559389 N6AMT1Q9Y5N5 214 aa18.55■□□□□ 0.56
SNX1-206ENST00000559389 APCP25054 2843 aa18.55■□□□□ 0.56
SNX1-206ENST00000559389 LOC110117498-PIK3R3F6TDL0 507 aa18.54■□□□□ 0.56
SNX1-206ENST00000559389 PNPP00491 289 aa18.54■□□□□ 0.56
SNX1-206ENST00000559389 LIMS3P0CW19 117 aa18.54■□□□□ 0.56
SNX1-206ENST00000559389 LIMS4P0CW20 117 aa18.54■□□□□ 0.56
SNX1-206ENST00000559389 PAX1P15863 534 aa18.54■□□□□ 0.56
SNX1-206ENST00000559389 ALDH3B1P43353 468 aa18.54■□□□□ 0.56
SNX1-206ENST00000559389 AHSA2Q719I0 299 aa18.54■□□□□ 0.56
SNX1-206ENST00000559389 LHFPL3Q86UP9 236 aa18.54■□□□□ 0.56
SNX1-206ENST00000559389 SYS1Q8N2H4 156 aa18.54■□□□□ 0.56
SNX1-206ENST00000559389 C4orf36Q96KX1 117 aa18.54■□□□□ 0.56
SNX1-206ENST00000559389 OR10A2Q9H208 303 aa18.54■□□□□ 0.56
SNX1-206ENST00000559389 CGGBP1Q9UFW8 167 aaPredicted RBP18.54■□□□□ 0.56
SNX1-206ENST00000559389 NUFIP1Q9UHK0 495 aaKnown RBP18.54■□□□□ 0.56
SNX1-206ENST00000559389 PCDHGB5Q9Y5G0 923 aa18.54■□□□□ 0.56
SNX1-206ENST00000559389 NBPF19A0A087WUL8 3843 aa18.53■□□□□ 0.56
SNX1-206ENST00000559389 DENRO43583 198 aaKnown RBP18.53■□□□□ 0.56
SNX1-206ENST00000559389 TIMM8AO60220 97 aaPredicted RBP18.53■□□□□ 0.56
SNX1-206ENST00000559389 CCDC159P0C7I6 412 aa18.53■□□□□ 0.56
SNX1-206ENST00000559389 PRSS12P56730 875 aa18.53■□□□□ 0.56
SNX1-206ENST00000559389 OR12D2P58182 307 aa18.53■□□□□ 0.56
SNX1-206ENST00000559389 MOGQ16653 247 aa18.53■□□□□ 0.56
SNX1-206ENST00000559389 TIGD6Q17RP2 521 aa18.53■□□□□ 0.56
SNX1-206ENST00000559389 NKPD1Q17RQ9 610 aa18.53■□□□□ 0.56
SNX1-206ENST00000559389 ALKBH6Q3KRA9 238 aa18.53■□□□□ 0.56
SNX1-206ENST00000559389 PGAP1Q75T13 922 aa18.53■□□□□ 0.56
SNX1-206ENST00000559389 KCTD20Q7Z5Y7 419 aa18.53■□□□□ 0.56
SNX1-206ENST00000559389 TMEM80Q96HE8 168 aa18.53■□□□□ 0.56
SNX1-206ENST00000559389 MYCBPQ99417 103 aaPredicted RBP18.53■□□□□ 0.56
SNX1-206ENST00000559389 REPIN1Q9BWE0 567 aaKnown RBP18.53■□□□□ 0.56
SNX1-206ENST00000559389 GSX2Q9BZM3 304 aa18.53■□□□□ 0.56
SNX1-206ENST00000559389 PBOV1Q9GZY1 135 aa18.53■□□□□ 0.56
SNX1-206ENST00000559389 RGCCQ9H4X1 137 aa18.53■□□□□ 0.56
SNX1-206ENST00000559389 GPR160Q9UJ42 338 aa18.53■□□□□ 0.56
SNX1-206ENST00000559389 EXOSC1Q9Y3B2 195 aaKnown RBP18.53■□□□□ 0.56
SNX1-206ENST00000559389 PMF1-BGLAPU3KQ54 211 aa18.53■□□□□ 0.56
SNX1-206ENST00000559389 CENPEQ02224 2701 aa18.52■□□□□ 0.56
SNX1-206ENST00000559389 hCG_38984A0A1B0GV85 526 aa18.52■□□□□ 0.56
SNX1-206ENST00000559389 IQCF6A8MYZ5 107 aa18.52■□□□□ 0.56
SNX1-206ENST00000559389 RPP14O95059 124 aaKnown RBP18.52■□□□□ 0.56
SNX1-206ENST00000559389 MYL12AP19105 171 aa18.52■□□□□ 0.56
SNX1-206ENST00000559389 PTH2RP49190 550 aa18.52■□□□□ 0.56
SNX1-206ENST00000559389 ETV1P50549 477 aa18.52■□□□□ 0.56
SNX1-206ENST00000559389 MMP15P51511 669 aa18.52■□□□□ 0.56
SNX1-206ENST00000559389 MVKQ03426 396 aa18.52■□□□□ 0.56
SNX1-206ENST00000559389 ST3GAL4Q11206 333 aa18.52■□□□□ 0.56
SNX1-206ENST00000559389 RORBQ92753 470 aa18.52■□□□□ 0.56
SNX1-206ENST00000559389 RNF166Q96A37 237 aaPredicted RBP18.52■□□□□ 0.56
SNX1-206ENST00000559389 SGK3Q96BR1 496 aa18.52■□□□□ 0.56
SNX1-206ENST00000559389 PELI1Q96FA3 418 aa18.52■□□□□ 0.56
SNX1-206ENST00000559389 REEP6Q96HR9 211 aa18.52■□□□□ 0.56
SNX1-206ENST00000559389 SIGLEC11Q96RL6 698 aa18.52■□□□□ 0.56
SNX1-206ENST00000559389 G6PC2Q9NQR9 355 aa18.52■□□□□ 0.56
SNX1-206ENST00000559389 AKAP6Q13023 2319 aa18.51■□□□□ 0.55
SNX1-206ENST00000559389 ARFGEF3Q5TH69 2177 aa18.51■□□□□ 0.55
SNX1-206ENST00000559389 ZSCAN5BA6NJL1 495 aa18.51■□□□□ 0.55
SNX1-206ENST00000559389 IGLV3-1P01715 115 aa18.51■□□□□ 0.55
SNX1-206ENST00000559389 TTRP02766 147 aa18.51■□□□□ 0.55
SNX1-206ENST00000559389 TACSTD2P09758 323 aa18.51■□□□□ 0.55
SNX1-206ENST00000559389 SELEP16581 610 aa18.51■□□□□ 0.55
SNX1-206ENST00000559389 CFL1P23528 166 aaKnown RBP18.51■□□□□ 0.55
SNX1-206ENST00000559389 GFOD2Q3B7J2 385 aa18.51■□□□□ 0.55
SNX1-206ENST00000559389 BCL2L15Q5TBC7 163 aa18.51■□□□□ 0.55
SNX1-206ENST00000559389 OR2T2Q6IF00 324 aa18.51■□□□□ 0.55
SNX1-206ENST00000559389 EGFL6Q8IUX8 553 aa18.51■□□□□ 0.55
SNX1-206ENST00000559389 ZNF540Q8NDQ6 660 aa18.51■□□□□ 0.55
SNX1-206ENST00000559389 GTF3AQ92664 365 aaKnown RBP18.51■□□□□ 0.55
SNX1-206ENST00000559389 SORCS2Q96PQ0 1159 aa18.51■□□□□ 0.55
SNX1-206ENST00000559389 CYSLTR2Q9NS75 346 aa18.51■□□□□ 0.55
SNX1-206ENST00000559389 PAK1IP1Q9NWT1 392 aaPredicted RBP18.51■□□□□ 0.55
SNX1-206ENST00000559389 SCN3BQ9NY72 215 aa18.51■□□□□ 0.55
SNX1-206ENST00000559389 ZNF391Q9UJN7 358 aa18.51■□□□□ 0.55
SNX1-206ENST00000559389 OR52A1Q9UKL2 312 aa18.51■□□□□ 0.55
SNX1-206ENST00000559389 SNX5Q9Y5X3 404 aa18.51■□□□□ 0.55
SNX1-206ENST00000559389 A0A0U1RQV5 110 aa18.5■□□□□ 0.55
SNX1-206ENST00000559389 J3QLW9 94 aa18.5■□□□□ 0.55
SNX1-206ENST00000559389 MT-ND5P03915 603 aa18.5■□□□□ 0.55
SNX1-206ENST00000559389 NAT2P11245 290 aa18.5■□□□□ 0.55
SNX1-206ENST00000559389 ZNF19P17023 458 aa18.5■□□□□ 0.55
SNX1-206ENST00000559389 PSMB10P40306 273 aa18.5■□□□□ 0.55
SNX1-206ENST00000559389 SLC35A2P78381 396 aa18.5■□□□□ 0.55
SNX1-206ENST00000559389 MED21Q13503 144 aa18.5■□□□□ 0.55
SNX1-206ENST00000559389 ZMAT1Q5H9K5 638 aa18.5■□□□□ 0.55
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