RNA–Protein interactions for RNA: ENST00000559281.5

TPM1-218, Transcript of tropomyosin 1, humanhuman

TSL 5 BASIC

Gene TPM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-218ENST00000559281 BTNL3Q6UXE8 466 aa14.9□□□□□ -0.02
TPM1-218ENST00000559281 DEFB108BQ8NET1 73 aa14.9□□□□□ -0.02
TPM1-218ENST00000559281 GCDHQ92947 438 aaPredicted RBP14.9□□□□□ -0.02
TPM1-218ENST00000559281 SLC6A7Q99884 636 aa14.9□□□□□ -0.02
TPM1-218ENST00000559281 SSBP3Q9BWW4 388 aaPredicted RBP14.9□□□□□ -0.02
TPM1-218ENST00000559281 CENPMQ9NSP4 180 aa14.9□□□□□ -0.02
TPM1-218ENST00000559281 NUP50Q9UKX7 468 aa14.9□□□□□ -0.02
TPM1-218ENST00000559281 COMMD3-BMI1R4GMX3 469 aa14.9□□□□□ -0.02
TPM1-218ENST00000559281 IGHV3-64DA0A0J9YX35 117 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 GMDSO60547 372 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 ZNF205O95201 554 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 SOX14O95416 240 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 FSHBP01225 129 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 ZNF3P17036 446 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 SPI1P17947 270 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 OTX1P32242 354 aaPredicted RBP14.89□□□□□ -0.03
TPM1-218ENST00000559281 RBMXP38159 391 aaKnown RBP14.89□□□□□ -0.03
TPM1-218ENST00000559281 SEC61A1P61619 476 aaKnown RBP14.89□□□□□ -0.03
TPM1-218ENST00000559281 GNB2P62879 340 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 MZT1Q08AG7 82 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 MAB21L1Q13394 359 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 PCK2Q16822 640 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 LRRN1Q6UXK5 716 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 CD300LDQ6UXZ3 194 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 KLBQ86Z14 1044 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 SPERTQ8NA61 448 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 ZNF511Q8NB15 262 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 PLPP7Q8NBV4 271 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 OR10G2Q8NGC3 310 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 OR8B3Q8NGG8 313 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 OR10S1Q8NGN2 331 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 OR6K6Q8NGW6 343 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 TEX47Q8TBZ9 253 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 Q8TCH9 128 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 GIPC3Q8TF64 312 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 ZNRF4Q8WWF5 429 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 SLAMF6Q96DU3 332 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 NEIL1Q96FI4 390 aaPredicted RBP14.89□□□□□ -0.03
TPM1-218ENST00000559281 OR8B2Q96RD0 313 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 KCNJ15Q99712 375 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 CHID1Q9BWS9 393 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 NMNAT2Q9BZQ4 307 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 OPA3Q9H6K4 179 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 SP140LQ9H930 580 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 ARMC1Q9NVT9 282 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 WNK2Q9Y3S1 2297 aa14.89□□□□□ -0.03
TPM1-218ENST00000559281 ZNF878C9JN71 531 aa14.88□□□□□ -0.03
TPM1-218ENST00000559281 GNGT2O14610 69 aa14.88□□□□□ -0.03
TPM1-218ENST00000559281 CST1P01037 141 aa14.88□□□□□ -0.03
TPM1-218ENST00000559281 APOC1P02654 83 aa14.88□□□□□ -0.03
TPM1-218ENST00000559281 T-ENOLP0DO92 83 aa14.88□□□□□ -0.03
TPM1-218ENST00000559281 CA6P23280 308 aa14.88□□□□□ -0.03
TPM1-218ENST00000559281 PRKXP51817 358 aa14.88□□□□□ -0.03
TPM1-218ENST00000559281 PRSS12P56730 875 aa14.88□□□□□ -0.03
TPM1-218ENST00000559281 GRB2P62993 217 aaKnown RBP14.88□□□□□ -0.03
TPM1-218ENST00000559281 ZNF92Q03936 586 aa14.88□□□□□ -0.03
TPM1-218ENST00000559281 KCNJ8Q15842 424 aa14.88□□□□□ -0.03
TPM1-218ENST00000559281 SNAI3Q3KNW1 292 aa14.88□□□□□ -0.03
TPM1-218ENST00000559281 ZNF404Q494X3 552 aa14.88□□□□□ -0.03
TPM1-218ENST00000559281 OR4Q3Q8NH05 313 aa14.88□□□□□ -0.03
TPM1-218ENST00000559281 CCDC124Q96CT7 223 aaKnown RBP14.88□□□□□ -0.03
TPM1-218ENST00000559281 TMEM246Q9BRR3 403 aa14.88□□□□□ -0.03
TPM1-218ENST00000559281 FN3KRPQ9HA64 309 aa14.88□□□□□ -0.03
TPM1-218ENST00000559281 CMC2Q9NRP2 79 aa14.88□□□□□ -0.03
TPM1-218ENST00000559281 VNN3Q9NY84 501 aa14.88□□□□□ -0.03
TPM1-218ENST00000559281 TAS2R1Q9NYW7 299 aa14.88□□□□□ -0.03
TPM1-218ENST00000559281 MRPL15Q9P015 296 aaKnown RBP14.88□□□□□ -0.03
TPM1-218ENST00000559281 DYSFO75923 2080 aa14.88□□□□□ -0.03
TPM1-218ENST00000559281 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.87□□□□□ -0.03
TPM1-218ENST00000559281 H3BN98 237 aa14.87□□□□□ -0.03
TPM1-218ENST00000559281 XRCC2O43543 280 aa14.87□□□□□ -0.03
TPM1-218ENST00000559281 GYPBP06028 91 aa14.87□□□□□ -0.03
TPM1-218ENST00000559281 PAICSP22234 425 aaKnown RBP14.87□□□□□ -0.03
TPM1-218ENST00000559281 DDOSTP39656 456 aa14.87□□□□□ -0.03
TPM1-218ENST00000559281 PMELP40967 661 aa14.87□□□□□ -0.03
TPM1-218ENST00000559281 PAX8Q06710 450 aa14.87□□□□□ -0.03
TPM1-218ENST00000559281 LYPD4Q6UWN0 246 aa14.87□□□□□ -0.03
TPM1-218ENST00000559281 RAB40AQ8WXH6 277 aa14.87□□□□□ -0.03
TPM1-218ENST00000559281 C22orf15Q8WYQ4 148 aa14.87□□□□□ -0.03
TPM1-218ENST00000559281 DVL3Q92997 716 aaPredicted RBP14.87□□□□□ -0.03
TPM1-218ENST00000559281 FEVQ99581 238 aa14.87□□□□□ -0.03
TPM1-218ENST00000559281 THTPAQ9BU02 230 aa14.87□□□□□ -0.03
TPM1-218ENST00000559281 TOR3AQ9H497 397 aa14.87□□□□□ -0.03
TPM1-218ENST00000559281 N6AMT1Q9Y5N5 214 aa14.87□□□□□ -0.03
TPM1-218ENST00000559281 TMEM89A2RUT3 159 aa14.86□□□□□ -0.03
TPM1-218ENST00000559281 ARRDC5A6NEK1 342 aa14.86□□□□□ -0.03
TPM1-218ENST00000559281 AQP12BA6NM10 295 aa14.86□□□□□ -0.03
TPM1-218ENST00000559281 PPIAL4GP0DN37 164 aa14.86□□□□□ -0.03
TPM1-218ENST00000559281 HSD11B1P28845 292 aa14.86□□□□□ -0.03
TPM1-218ENST00000559281 GRK5P34947 590 aa14.86□□□□□ -0.03
TPM1-218ENST00000559281 PITPNBP48739 271 aa14.86□□□□□ -0.03
TPM1-218ENST00000559281 COMPP49747 757 aaPredicted RBP14.86□□□□□ -0.03
TPM1-218ENST00000559281 GLYATL3Q5SZD4 288 aa14.86□□□□□ -0.03
TPM1-218ENST00000559281 DCDC5Q6ZRR9 648 aa14.86□□□□□ -0.03
TPM1-218ENST00000559281 SHFQ7M4L6 423 aa14.86□□□□□ -0.03
TPM1-218ENST00000559281 AQP12AQ8IXF9 295 aa14.86□□□□□ -0.03
TPM1-218ENST00000559281 OR2AE1Q8NHA4 323 aa14.86□□□□□ -0.03
TPM1-218ENST00000559281 OTULINQ96BN8 352 aa14.86□□□□□ -0.03
TPM1-218ENST00000559281 INTS14Q96SY0 518 aa14.86□□□□□ -0.03
TPM1-218ENST00000559281 NIPSNAP1Q9BPW8 284 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms