RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 FITM2Q8N6M3 262 aa11.28□□□□□ -0.6
VPS18-203ENST00000558855 Q8TCH9 128 aa11.28□□□□□ -0.6
VPS18-203ENST00000558855 UPRTQ96BW1 309 aa11.28□□□□□ -0.6
VPS18-203ENST00000558855 NEIL1Q96FI4 390 aaPredicted RBP11.28□□□□□ -0.6
VPS18-203ENST00000558855 ZNF799Q96GE5 643 aa11.28□□□□□ -0.6
VPS18-203ENST00000558855 JMJD8Q96S16 334 aa11.28□□□□□ -0.6
VPS18-203ENST00000558855 MRI1Q9BV20 369 aa11.28□□□□□ -0.6
VPS18-203ENST00000558855 NMNAT2Q9BZQ4 307 aa11.28□□□□□ -0.6
VPS18-203ENST00000558855 DDX28Q9NUL7 540 aaKnown RBP11.28□□□□□ -0.6
VPS18-203ENST00000558855 ARMC1Q9NVT9 282 aa11.28□□□□□ -0.6
VPS18-203ENST00000558855 A0A1B0GW55 424 aa11.27□□□□□ -0.61
VPS18-203ENST00000558855 CD300LBA8K4G0 201 aa11.27□□□□□ -0.61
VPS18-203ENST00000558855 TNFRSF11BO00300 401 aa11.27□□□□□ -0.61
VPS18-203ENST00000558855 TNFRSF13BO14836 293 aaPredicted RBP11.27□□□□□ -0.61
VPS18-203ENST00000558855 SPRY1O43609 319 aaPredicted RBP11.27□□□□□ -0.61
VPS18-203ENST00000558855 GMNNO75496 209 aa11.27□□□□□ -0.61
VPS18-203ENST00000558855 SFTPBP07988 381 aa11.27□□□□□ -0.61
VPS18-203ENST00000558855 DUX4L2P0CJ85 424 aa11.27□□□□□ -0.61
VPS18-203ENST00000558855 DUX4L3P0CJ86 424 aa11.27□□□□□ -0.61
VPS18-203ENST00000558855 DUX4L4P0CJ87 422 aa11.27□□□□□ -0.61
VPS18-203ENST00000558855 DUX4L5P0CJ88 424 aa11.27□□□□□ -0.61
VPS18-203ENST00000558855 DUX4L6P0CJ89 424 aa11.27□□□□□ -0.61
VPS18-203ENST00000558855 DUX4L7P0CJ90 424 aa11.27□□□□□ -0.61
VPS18-203ENST00000558855 FPR2P25090 351 aa11.27□□□□□ -0.61
VPS18-203ENST00000558855 PSMB10P40306 273 aa11.27□□□□□ -0.61
VPS18-203ENST00000558855 PITPNBP48739 271 aa11.27□□□□□ -0.61
VPS18-203ENST00000558855 PRKXP51817 358 aa11.27□□□□□ -0.61
VPS18-203ENST00000558855 GNGT1P63211 74 aa11.27□□□□□ -0.61
VPS18-203ENST00000558855 POU4F2Q12837 409 aa11.27□□□□□ -0.61
VPS18-203ENST00000558855 SLC9A3R2Q15599 337 aa11.27□□□□□ -0.61
VPS18-203ENST00000558855 SLC36A3Q495N2 470 aa11.27□□□□□ -0.61
VPS18-203ENST00000558855 LINC01590Q5TEZ4 76 aa11.27□□□□□ -0.61
VPS18-203ENST00000558855 WDR25Q64LD2 544 aaPredicted RBP11.27□□□□□ -0.61
VPS18-203ENST00000558855 SFRP4Q6FHJ7 346 aaPredicted RBP11.27□□□□□ -0.61
VPS18-203ENST00000558855 DUX4L9Q6RFH8 374 aaPredicted RBP11.27□□□□□ -0.61
VPS18-203ENST00000558855 SPATC1Q76KD6 591 aa11.27□□□□□ -0.61
VPS18-203ENST00000558855 CPLX4Q7Z7G2 160 aa11.27□□□□□ -0.61
VPS18-203ENST00000558855 AQP11Q8NBQ7 271 aa11.27□□□□□ -0.61
VPS18-203ENST00000558855 PROKR2Q8NFJ6 384 aa11.27□□□□□ -0.61
VPS18-203ENST00000558855 OR2AJ1Q8NGZ0 328 aa11.27□□□□□ -0.61
VPS18-203ENST00000558855 RAB40AQ8WXH6 277 aa11.27□□□□□ -0.61
VPS18-203ENST00000558855 AMELYQ99218 206 aa11.27□□□□□ -0.61
VPS18-203ENST00000558855 ADAT1Q9BUB4 502 aaKnown RBP11.27□□□□□ -0.61
VPS18-203ENST00000558855 NSRP1Q9H0G5 558 aaKnown RBP11.27□□□□□ -0.61
VPS18-203ENST00000558855 MED20Q9H944 212 aa11.27□□□□□ -0.61
VPS18-203ENST00000558855 IL20Q9NYY1 176 aa11.27□□□□□ -0.61
VPS18-203ENST00000558855 DUX4Q9UBX2 424 aa11.27□□□□□ -0.61
VPS18-203ENST00000558855 TMPRSS2O15393 492 aa11.26□□□□□ -0.61
VPS18-203ENST00000558855 IDH3BO43837 385 aa11.26□□□□□ -0.61
VPS18-203ENST00000558855 PTBP3O95758 552 aaKnown RBP11.26□□□□□ -0.61
VPS18-203ENST00000558855 SPARCP09486 303 aa11.26□□□□□ -0.61
VPS18-203ENST00000558855 SPI1P17947 270 aa11.26□□□□□ -0.61
VPS18-203ENST00000558855 FGF12P61328 243 aa11.26□□□□□ -0.61
VPS18-203ENST00000558855 BAMBIQ13145 260 aa11.26□□□□□ -0.61
VPS18-203ENST00000558855 PCK2Q16822 640 aa11.26□□□□□ -0.61
VPS18-203ENST00000558855 DEFB112Q30KQ8 113 aa11.26□□□□□ -0.61
VPS18-203ENST00000558855 KLHL12Q53G59 568 aa11.26□□□□□ -0.61
VPS18-203ENST00000558855 RASSF6Q6ZTQ3 369 aa11.26□□□□□ -0.61
VPS18-203ENST00000558855 C9orf139Q6ZV77 190 aa11.26□□□□□ -0.61
VPS18-203ENST00000558855 PGAP1Q75T13 922 aa11.26□□□□□ -0.61
VPS18-203ENST00000558855 MRPL21Q7Z2W9 205 aaKnown RBP11.26□□□□□ -0.61
VPS18-203ENST00000558855 LNX2Q8N448 690 aa11.26□□□□□ -0.61
VPS18-203ENST00000558855 IQCF1Q8N6M8 205 aa11.26□□□□□ -0.61
VPS18-203ENST00000558855 BOLLQ8N9W6 283 aaKnown RBP11.26□□□□□ -0.61
VPS18-203ENST00000558855 OR56B2PQ8NGI1 322 aa11.26□□□□□ -0.61
VPS18-203ENST00000558855 MCUR1Q96AQ8 359 aa11.26□□□□□ -0.61
VPS18-203ENST00000558855 NUDT16L1Q9BRJ7 211 aaKnown RBP11.26□□□□□ -0.61
VPS18-203ENST00000558855 RASSF4Q9H2L5 321 aa11.26□□□□□ -0.61
VPS18-203ENST00000558855 NTN4Q9HB63 628 aa11.26□□□□□ -0.61
VPS18-203ENST00000558855 TBC1D23Q9NUY8 699 aa11.26□□□□□ -0.61
VPS18-203ENST00000558855 ZNF319Q9P2F9 582 aa11.26□□□□□ -0.61
VPS18-203ENST00000558855 MIOXQ9UGB7 285 aa11.26□□□□□ -0.61
VPS18-203ENST00000558855 ARL2BPQ9Y2Y0 163 aa11.26□□□□□ -0.61
VPS18-203ENST00000558855 U3KQV3 271 aa11.26□□□□□ -0.61
VPS18-203ENST00000558855 MGAM2Q2M2H8 2515 aa11.25□□□□□ -0.61
VPS18-203ENST00000558855 KIR2DS1A0A191URI9 304 aa11.25□□□□□ -0.61
VPS18-203ENST00000558855 FAM183AA6NL82 134 aa11.25□□□□□ -0.61
VPS18-203ENST00000558855 IFNL4K9M1U5 179 aa11.25□□□□□ -0.61
VPS18-203ENST00000558855 KCNAB3O43448 404 aa11.25□□□□□ -0.61
VPS18-203ENST00000558855 FSTL3O95633 263 aa11.25□□□□□ -0.61
VPS18-203ENST00000558855 RNASE1P07998 156 aaKnown RBP11.25□□□□□ -0.61
VPS18-203ENST00000558855 OMGP23515 440 aa11.25□□□□□ -0.61
VPS18-203ENST00000558855 TPTEP56180 551 aa11.25□□□□□ -0.61
VPS18-203ENST00000558855 ECH1Q13011 328 aa11.25□□□□□ -0.61
VPS18-203ENST00000558855 OR8G1Q15617 311 aa11.25□□□□□ -0.61
VPS18-203ENST00000558855 DCDC5Q6ZRR9 648 aa11.25□□□□□ -0.61
VPS18-203ENST00000558855 TMEM179BQ7Z7N9 219 aa11.25□□□□□ -0.61
VPS18-203ENST00000558855 GCSAMQ8N6F7 178 aa11.25□□□□□ -0.61
VPS18-203ENST00000558855 OR8B3Q8NGG8 313 aa11.25□□□□□ -0.61
VPS18-203ENST00000558855 SLAMF6Q96DU3 332 aa11.25□□□□□ -0.61
VPS18-203ENST00000558855 SEH1LQ96EE3 360 aa11.25□□□□□ -0.61
VPS18-203ENST00000558855 OR8B2Q96RD0 313 aa11.25□□□□□ -0.61
VPS18-203ENST00000558855 TBX15Q96SF7 602 aa11.25□□□□□ -0.61
VPS18-203ENST00000558855 NIPSNAP1Q9BPW8 284 aa11.25□□□□□ -0.61
VPS18-203ENST00000558855 ZNF747Q9BV97 191 aa11.25□□□□□ -0.61
VPS18-203ENST00000558855 TSSK6Q9BXA6 273 aa11.25□□□□□ -0.61
VPS18-203ENST00000558855 MS4A7Q9GZW8 240 aaPredicted RBP11.25□□□□□ -0.61
VPS18-203ENST00000558855 TAS2R1Q9NYW7 299 aa11.25□□□□□ -0.61
VPS18-203ENST00000558855 ACTR3BQ9P1U1 418 aa11.25□□□□□ -0.61
VPS18-203ENST00000558855 KCNG2Q9UJ96 466 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms