RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 TPBGQ13641 420 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 LAGE3Q14657 143 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 SMCO1Q147U7 214 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 PTGES3Q15185 160 aaKnown RBP2.04□□□□□ -2.08
SPG11-206ENST00000558093 ZNHIT3Q15649 155 aaPredicted RBP2.04□□□□□ -2.08
SPG11-206ENST00000558093 ZBTB6Q15916 424 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 GABRA6Q16445 453 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 RFX7Q2KHR2 1363 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 CCDC58Q4VC31 144 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 MTUS2Q5JR59 1369 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 SOHLH1Q5JUK2 328 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 CCNJQ5T5M9 372 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 ANKRD26P1Q6NSI1 321 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 FAHD2BQ6P2I3 314 aaPredicted RBP2.04□□□□□ -2.08
SPG11-206ENST00000558093 CCDC171Q6TFL3 1326 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 SPESP1Q6UW49 350 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 CD300LGQ6UXG3 332 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 FAM92BQ6ZTR7 304 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 SLC16A14Q7RTX9 510 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 HDDC2Q7Z4H3 204 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 DPPA2Q7Z7J5 298 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 FAM71AQ8IYT1 594 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 Q8N402 240 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 MDS2Q8NDY4 140 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 OR5AU1Q8NGC0 362 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 OR51G1Q8NGK1 321 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 OR10J5Q8NHC4 309 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 NANPQ8TBE9 248 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 LGALS14Q8TCE9 139 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 DYNC2LI1Q8TCX1 351 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 MCOLN3Q8TDD5 553 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 ACTRT1Q8TDG2 376 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 AENQ8WTP8 325 aaKnown RBP2.04□□□□□ -2.08
SPG11-206ENST00000558093 PHF10Q8WUB8 498 aaKnown RBP2.04□□□□□ -2.08
SPG11-206ENST00000558093 RNF133Q8WVZ7 376 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 C22orf15Q8WYQ4 148 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 ISOC2Q96AB3 205 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 APH1AQ96BI3 265 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 FAHD2AQ96GK7 314 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 ZFP3Q96NJ6 502 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 WFIKKN1Q96NZ8 548 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 PRAP1Q96NZ9 151 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 EBNA1BP2Q99848 306 aaKnown RBP2.04□□□□□ -2.08
SPG11-206ENST00000558093 HOPXQ9BPY8 73 aaPredicted RBP2.04□□□□□ -2.08
SPG11-206ENST00000558093 COPS4Q9BT78 406 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 ZNF426Q9BUY5 554 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 SLC17A9Q9BYT1 436 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 PORCNQ9H237 461 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 NEUROG2Q9H2A3 272 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 OR51B5Q9H339 312 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 TRABDQ9H4I3 376 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 ZNF385DQ9H6B1 395 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 ZC4H2Q9NQZ6 224 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 NLE1Q9NVX2 485 aaPredicted RBP2.04□□□□□ -2.08
SPG11-206ENST00000558093 PLEKHJ1Q9NW61 149 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 TREM2Q9NZC2 230 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 ZNF282Q9UDV7 671 aaPredicted RBP2.04□□□□□ -2.08
SPG11-206ENST00000558093 NUFIP1Q9UHK0 495 aaKnown RBP2.04□□□□□ -2.08
SPG11-206ENST00000558093 OPN4Q9UHM6 478 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 SLC22A13Q9Y226 551 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 UGT2A1Q9Y4X1 527 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 FADS3Q9Y5Q0 445 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 V9GYY9 64 aa2.04□□□□□ -2.08
SPG11-206ENST00000558093 MYH3P11055 1940 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 FRMPD3Q5JV73 1810 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 PNPLA6Q8IY17 1366 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 MAP3K5Q99683 1374 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 RPAP1Q9BWH6 1393 aaPredicted RBP2.03□□□□□ -2.08
SPG11-206ENST00000558093 RAB3GAP2Q9H2M9 1393 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 A0A1W2PRD5 423 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 SLC5A10A0PJK1 596 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 ZNF729A6NN14 1252 aaPredicted RBP2.03□□□□□ -2.08
SPG11-206ENST00000558093 PP2D1A8MPX8 630 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 SYCE1LA8MT33 242 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 CENPXA8MT69 81 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 H0Y980 276 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 K7EN84 100 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 hCG_2039718K7EN88 272 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 SULT1C2O00338 296 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 CCRL2O00421 344 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 KPNA3O00505 521 aaPredicted RBP2.03□□□□□ -2.08
SPG11-206ENST00000558093 SLC9A3R1O14745 358 aaPredicted RBP2.03□□□□□ -2.08
SPG11-206ENST00000558093 SGCEO43556 437 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 CTNSO60931 367 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 NOS1APO75052 506 aaPredicted RBP2.03□□□□□ -2.08
SPG11-206ENST00000558093 SMIM24O75264 130 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 ZNF780AO75290 641 aaPredicted RBP2.03□□□□□ -2.08
SPG11-206ENST00000558093 SUPT3HO75486 399 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 HSBP1O75506 76 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 ZMPSTE24O75844 475 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 GATBO75879 557 aaKnown RBP2.03□□□□□ -2.08
SPG11-206ENST00000558093 DIRAS1O95057 198 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 CLDN9O95484 217 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 OXSR1O95747 527 aaPredicted RBP2.03□□□□□ -2.08
SPG11-206ENST00000558093 TMEM50AO95807 157 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 TCRBP04435 133 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 OCM2P0CE71 109 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 SLC2A1P11166 492 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 ZNF43P17038 809 aa2.03□□□□□ -2.08
SPG11-206ENST00000558093 KITLGP21583 273 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms