RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 MBNL2Q5VZF2 373 aaKnown RBP18.25■□□□□ 0.51
CASC4-204ENST00000557945 MRPL21Q7Z2W9 205 aaKnown RBP18.25■□□□□ 0.51
CASC4-204ENST00000557945 SYS1Q8N2H4 156 aa18.25■□□□□ 0.51
CASC4-204ENST00000557945 RORBQ92753 470 aa18.25■□□□□ 0.51
CASC4-204ENST00000557945 SIGLEC11Q96RL6 698 aa18.25■□□□□ 0.51
CASC4-204ENST00000557945 PBOV1Q9GZY1 135 aa18.25■□□□□ 0.51
CASC4-204ENST00000557945 CBLN4Q9NTU7 201 aa18.25■□□□□ 0.51
CASC4-204ENST00000557945 CAB39Q9Y376 341 aaPredicted RBP18.25■□□□□ 0.51
CASC4-204ENST00000557945 SNX5Q9Y5X3 404 aa18.25■□□□□ 0.51
CASC4-204ENST00000557945 CELSR2Q9HCU4 2923 aa18.24■□□□□ 0.51
CASC4-204ENST00000557945 FLNBO75369 2602 aaKnown RBP18.24■□□□□ 0.51
CASC4-204ENST00000557945 ACOD1A6NK06 481 aa18.24■□□□□ 0.51
CASC4-204ENST00000557945 B9A039 149 aa18.24■□□□□ 0.51
CASC4-204ENST00000557945 H3BSA7 217 aa18.24■□□□□ 0.51
CASC4-204ENST00000557945 XRCC2O43543 280 aa18.24■□□□□ 0.51
CASC4-204ENST00000557945 RGS10O43665 173 aa18.24■□□□□ 0.51
CASC4-204ENST00000557945 PRSS12P56730 875 aa18.24■□□□□ 0.51
CASC4-204ENST00000557945 GK2Q14410 553 aaPredicted RBP18.24■□□□□ 0.51
CASC4-204ENST00000557945 EFNB3Q15768 340 aa18.24■□□□□ 0.51
CASC4-204ENST00000557945 BCL2L15Q5TBC7 163 aa18.24■□□□□ 0.51
CASC4-204ENST00000557945 OR2G6Q5TZ20 316 aa18.24■□□□□ 0.51
CASC4-204ENST00000557945 OR8B12Q8NGG6 310 aa18.24■□□□□ 0.51
CASC4-204ENST00000557945 SPRYD4Q8WW59 207 aaPredicted RBP18.24■□□□□ 0.51
CASC4-204ENST00000557945 PPP1R14AQ96A00 147 aa18.24■□□□□ 0.51
CASC4-204ENST00000557945 PELI1Q96FA3 418 aa18.24■□□□□ 0.51
CASC4-204ENST00000557945 CCL19Q99731 98 aa18.24■□□□□ 0.51
CASC4-204ENST00000557945 CCDC90BQ9GZT6 254 aa18.24■□□□□ 0.51
CASC4-204ENST00000557945 DUSP21Q9H596 190 aa18.24■□□□□ 0.51
CASC4-204ENST00000557945 MOB1AQ9H8S9 216 aa18.24■□□□□ 0.51
CASC4-204ENST00000557945 ZNF319Q9P2F9 582 aa18.24■□□□□ 0.51
CASC4-204ENST00000557945 MYEF2Q9P2K5 600 aaKnown RBP18.24■□□□□ 0.51
CASC4-204ENST00000557945 OR52A1Q9UKL2 312 aa18.24■□□□□ 0.51
CASC4-204ENST00000557945 ABCA12Q86UK0 2595 aa18.24■□□□□ 0.51
CASC4-204ENST00000557945 CACNA1DQ01668 2161 aa18.23■□□□□ 0.51
CASC4-204ENST00000557945 NBPF19A0A087WUL8 3843 aa18.23■□□□□ 0.51
CASC4-204ENST00000557945 TMEM129A0AVI4 362 aa18.23■□□□□ 0.51
CASC4-204ENST00000557945 TIMM8AO60220 97 aaPredicted RBP18.23■□□□□ 0.51
CASC4-204ENST00000557945 SRSF10O75494 262 aaKnown RBP18.23■□□□□ 0.51
CASC4-204ENST00000557945 MT-ND5P03915 603 aa18.23■□□□□ 0.51
CASC4-204ENST00000557945 SNRPD2P62316 118 aaKnown RBP18.23■□□□□ 0.51
CASC4-204ENST00000557945 ZNF92Q03936 586 aa18.23■□□□□ 0.51
CASC4-204ENST00000557945 PSG7Q13046 419 aa18.23■□□□□ 0.51
CASC4-204ENST00000557945 MST1LQ2TV78 715 aa18.23■□□□□ 0.51
CASC4-204ENST00000557945 PAMR1Q6UXH9 720 aa18.23■□□□□ 0.51
CASC4-204ENST00000557945 FBXW12Q6X9E4 464 aa18.23■□□□□ 0.51
CASC4-204ENST00000557945 PGAP1Q75T13 922 aa18.23■□□□□ 0.51
CASC4-204ENST00000557945 DTX2Q86UW9 622 aa18.23■□□□□ 0.51
CASC4-204ENST00000557945 COMMD2Q86X83 199 aa18.23■□□□□ 0.51
CASC4-204ENST00000557945 SGK3Q96BR1 496 aa18.23■□□□□ 0.51
CASC4-204ENST00000557945 REEP6Q96HR9 211 aa18.23■□□□□ 0.51
CASC4-204ENST00000557945 LURAP1Q96LR2 239 aa18.23■□□□□ 0.51
CASC4-204ENST00000557945 TRAF4Q9BUZ4 470 aaPredicted RBP18.23■□□□□ 0.51
CASC4-204ENST00000557945 TAAR3PQ9P1P4 343 aa18.23■□□□□ 0.51
CASC4-204ENST00000557945 NUFIP1Q9UHK0 495 aaKnown RBP18.23■□□□□ 0.51
CASC4-204ENST00000557945 EDARQ9UNE0 448 aa18.23■□□□□ 0.51
CASC4-204ENST00000557945 ERGIC3Q9Y282 383 aa18.23■□□□□ 0.51
CASC4-204ENST00000557945 SPG11Q96JI7 2443 aa18.22■□□□□ 0.51
CASC4-204ENST00000557945 RAI1Q7Z5J4 1906 aaPredicted RBP18.22■□□□□ 0.51
CASC4-204ENST00000557945 MYL12BO14950 172 aa18.22■□□□□ 0.51
CASC4-204ENST00000557945 CD8AP01732 235 aa18.22■□□□□ 0.51
CASC4-204ENST00000557945 HTR1AP08908 422 aa18.22■□□□□ 0.51
CASC4-204ENST00000557945 RAC2P15153 192 aa18.22■□□□□ 0.51
CASC4-204ENST00000557945 EVX1P49640 407 aa18.22■□□□□ 0.51
CASC4-204ENST00000557945 GBX2P52951 348 aaPredicted RBP18.22■□□□□ 0.51
CASC4-204ENST00000557945 NKPD1Q17RQ9 610 aa18.22■□□□□ 0.51
CASC4-204ENST00000557945 ALKBH6Q3KRA9 238 aa18.22■□□□□ 0.51
CASC4-204ENST00000557945 EGFL6Q8IUX8 553 aa18.22■□□□□ 0.51
CASC4-204ENST00000557945 HAVCR1Q96D42 359 aa18.22■□□□□ 0.51
CASC4-204ENST00000557945 YTHDF1Q9BYJ9 559 aaKnown RBP18.22■□□□□ 0.51
CASC4-204ENST00000557945 DYNLRB1Q9NP97 96 aa18.22■□□□□ 0.51
CASC4-204ENST00000557945 G6PC2Q9NQR9 355 aa18.22■□□□□ 0.51
CASC4-204ENST00000557945 GPR160Q9UJ42 338 aa18.22■□□□□ 0.51
CASC4-204ENST00000557945 SLC22A13Q9Y226 551 aa18.22■□□□□ 0.51
CASC4-204ENST00000557945 PLEKHA6Q9Y2H5 1048 aa18.22■□□□□ 0.51
CASC4-204ENST00000557945 IGLV3-9A0A075B6K5 115 aa18.21■□□□□ 0.51
CASC4-204ENST00000557945 IGHV3-13P01766 116 aa18.21■□□□□ 0.51
CASC4-204ENST00000557945 RAF1P04049 648 aa18.21■□□□□ 0.51
CASC4-204ENST00000557945 BMP4P12644 408 aa18.21■□□□□ 0.51
CASC4-204ENST00000557945 ALDH3B1P43353 468 aa18.21■□□□□ 0.51
CASC4-204ENST00000557945 MOGQ16653 247 aa18.21■□□□□ 0.51
CASC4-204ENST00000557945 SWI5Q1ZZU3 235 aa18.21■□□□□ 0.51
CASC4-204ENST00000557945 ODF4Q2M2E3 257 aa18.21■□□□□ 0.51
CASC4-204ENST00000557945 OR2T2Q6IF00 324 aa18.21■□□□□ 0.51
CASC4-204ENST00000557945 CATSPERDQ86XM0 798 aa18.21■□□□□ 0.51
CASC4-204ENST00000557945 OR52N1Q8NH53 320 aa18.21■□□□□ 0.51
CASC4-204ENST00000557945 GATAD2BQ8WXI9 593 aa18.21■□□□□ 0.51
CASC4-204ENST00000557945 CDCA4Q9BXL8 241 aa18.21■□□□□ 0.51
CASC4-204ENST00000557945 RGCCQ9H4X1 137 aa18.21■□□□□ 0.51
CASC4-204ENST00000557945 PURGQ9UJV8 347 aaKnown RBP18.21■□□□□ 0.51
CASC4-204ENST00000557945 DSCAMO60469 2012 aa18.21■□□□□ 0.51
CASC4-204ENST00000557945 ASH1LQ9NR48 2969 aaKnown RBP18.21■□□□□ 0.5
CASC4-204ENST00000557945 GGT3PA6NGU5 568 aa18.2■□□□□ 0.5
CASC4-204ENST00000557945 E9PI62 339 aa18.2■□□□□ 0.5
CASC4-204ENST00000557945 TTRP02766 147 aa18.2■□□□□ 0.5
CASC4-204ENST00000557945 MT-ND2P03891 347 aa18.2■□□□□ 0.5
CASC4-204ENST00000557945 CFL1P23528 166 aaKnown RBP18.2■□□□□ 0.5
CASC4-204ENST00000557945 MRPL28Q13084 256 aaKnown RBP18.2■□□□□ 0.5
CASC4-204ENST00000557945 TMEM255AQ5JRV8 349 aa18.2■□□□□ 0.5
CASC4-204ENST00000557945 WDR38Q5JTN6 314 aa18.2■□□□□ 0.5
CASC4-204ENST00000557945 C11orf71Q6IPW1 123 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms