RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 IGHV3-23P01764 117 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 OCM2P0CE71 109 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 CFC1BP0CG36 223 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 CFC1P0CG37 223 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 ERGP11308 486 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 PSKH1P11801 424 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 HOXA6P31267 233 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 RPA3P35244 121 aaPredicted RBP2.87□□□□□ -1.95
TDP1-217ENST00000557782 MDH2P40926 338 aaKnown RBP2.87□□□□□ -1.95
TDP1-217ENST00000557782 RPL14P50914 215 aaKnown RBP2.87□□□□□ -1.95
TDP1-217ENST00000557782 FGF8P55075 233 aaPredicted RBP2.87□□□□□ -1.95
TDP1-217ENST00000557782 OR12D2P58182 307 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 PPP1CBP62140 327 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 KDSRQ06136 332 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 FADDQ13158 208 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 RAB31Q13636 194 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 PON2Q15165 354 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 GUSBP1Q15486 140 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 NSDHLQ15738 373 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 UAP1Q16222 522 aaPredicted RBP2.87□□□□□ -1.95
TDP1-217ENST00000557782 GSG1Q2KHT4 349 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 HBMQ6B0K9 141 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 BAIAP2L2Q6UXY1 529 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 Q6ZT83 130 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 PAGE2Q7Z2X7 111 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 P2RY8Q86VZ1 359 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 KRTAP19-1Q8IUB9 90 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 TMEM61Q8N0U2 210 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 ATPAF2Q8N5M1 289 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 NPWQ8N729 165 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 CCDC54Q8NEL0 328 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 LFNGQ8NES3 379 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 ZNF461Q8TAF7 563 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 ZFAND1Q8TCF1 268 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 RNASEH2CQ8TDP1 164 aaKnown RBP2.87□□□□□ -1.95
TDP1-217ENST00000557782 DNAJB3Q8WWF6 145 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 ANKRD7Q92527 254 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 CDS1Q92903 461 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 PPWD1Q96BP3 646 aaKnown RBP2.87□□□□□ -1.95
TDP1-217ENST00000557782 PPP1R14BQ96C90 147 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 SEH1LQ96EE3 360 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 VSIG2Q96IQ7 327 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 SIGLEC12Q96PQ1 595 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 GABRG3Q99928 467 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 RASL11BQ9BPW5 248 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 OR51B5Q9H339 312 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 PRORYQ9H606 182 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 GNB4Q9HAV0 340 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 ZDHHC4Q9NPG8 344 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 ASCL3Q9NQ33 180 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 FBXO8Q9NRD0 319 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 RGS18Q9NS28 235 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 SLC7A11Q9UPY5 501 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 SNX24Q9Y343 169 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 USH1CQ9Y6N9 552 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 ELP1O95163 1332 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 CEMIPQ8WUJ3 1361 aa2.87□□□□□ -1.95
TDP1-217ENST00000557782 CHD4Q14839 1912 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 IGHV3OR16-9A0A0B4J2B5 98 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 FAM240AA0A1B0GVK7 77 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 A0A1B0GX12 115 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 A0A1W2PRG6 482 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 ISPDA4D126 451 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 TMEM210A6NLX4 147 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 ERI2A8K979 691 aaKnown RBP2.86□□□□□ -1.95
TDP1-217ENST00000557782 FABP7O15540 132 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 CRXO43186 299 aaPredicted RBP2.86□□□□□ -1.95
TDP1-217ENST00000557782 CTNSO60931 367 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 IGHV3-13P01766 116 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 SLC35G6P0C7Q6 338 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 IGHV3-43DP0DP04 118 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 THRAP10827 490 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 CD1EP15812 388 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 GALR1P47211 349 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 RHOAP61586 193 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 BASP1P80723 227 aaKnown RBP2.86□□□□□ -1.95
TDP1-217ENST00000557782 CD164Q04900 197 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 TRAM1Q15629 374 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 TRIP13Q15645 432 aaPredicted RBP2.86□□□□□ -1.95
TDP1-217ENST00000557782 SGCAQ16586 387 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 COQ5Q5HYK3 327 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 SAPCD1Q5SSQ6 148 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 RFLNAQ6ZTI6 216 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 ZNF677Q86XU0 584 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 CYP4Z2PQ8N1L4 340 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 UBAC2Q8NBM4 344 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 OR5T1Q8NG75 326 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 OR4S2Q8NH73 311 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 RGP1Q92546 391 aaPredicted RBP2.86□□□□□ -1.95
TDP1-217ENST00000557782 CPNE4Q96A23 557 aaPredicted RBP2.86□□□□□ -1.95
TDP1-217ENST00000557782 CMTM5Q96DZ9 223 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 GALNT14Q96FL9 552 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 AURKBQ96GD4 344 aaPredicted RBP2.86□□□□□ -1.95
TDP1-217ENST00000557782 RNF145Q96MT1 663 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 YTHDF1Q9BYJ9 559 aaKnown RBP2.86□□□□□ -1.95
TDP1-217ENST00000557782 OR11A1Q9GZK7 315 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 COA1Q9GZY4 146 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 ARV1Q9H2C2 271 aa2.86□□□□□ -1.95
TDP1-217ENST00000557782 MYOZ1Q9NP98 299 aaPredicted RBP2.86□□□□□ -1.95
TDP1-217ENST00000557782 CCL28Q9NRJ3 127 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms