RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 IGHV1-46P01743 117 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 HPXP02790 462 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 NAA10P41227 235 aaPredicted RBP7.1□□□□□ -1.27
PSEN1-223ENST00000557511 MAGEB1P43366 347 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 CX3CR1P49238 355 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 SRP9P49458 86 aaKnown RBP7.1□□□□□ -1.27
PSEN1-223ENST00000557511 ALDH3A2P51648 485 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 CDH15P55291 814 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 ZSCAN26Q16670 478 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 PCK2Q16822 640 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 TIGD6Q17RP2 521 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 LINC01590Q5TEZ4 76 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 CYB5R2Q6BCY4 276 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 OR2T2Q6IF00 324 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 DNM1P46Q6ZS02 220 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 USP51Q70EK9 711 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 MEPCEQ7L2J0 689 aaKnown RBP7.1□□□□□ -1.27
PSEN1-223ENST00000557511 TIGD4Q8IY51 512 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 PQLC1Q8N2U9 271 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 CIARTQ8N365 385 aaPredicted RBP7.1□□□□□ -1.27
PSEN1-223ENST00000557511 FTMTQ8N4E7 242 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 CBR4Q8N4T8 237 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 MAPK1IP1LQ8NDC0 245 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 ZNF555Q8NEP9 628 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 OR8G5Q8NG78 346 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 OR2Z1Q8NG97 314 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 OR52H1Q8NGJ2 320 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 OR8J1Q8NGP2 316 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 OTOSQ8NHW6 89 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 FAM81AQ8TBF8 368 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 RNF133Q8WVZ7 376 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 ZNRF4Q8WWF5 429 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 TRUB1Q8WWH5 349 aaKnown RBP7.1□□□□□ -1.27
PSEN1-223ENST00000557511 ASB17Q8WXJ9 295 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 PGAM5Q96HS1 289 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 IL4I1Q96RQ9 567 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 MYCBPQ99417 103 aaPredicted RBP7.1□□□□□ -1.27
PSEN1-223ENST00000557511 CNN2Q99439 309 aaKnown RBP7.1□□□□□ -1.27
PSEN1-223ENST00000557511 TEAD3Q99594 435 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 ABHD6Q9BV23 337 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 BPESC1Q9GZL8 116 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 YIPF3Q9GZM5 350 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 OR10A2Q9H208 303 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 MARCH7Q9H992 704 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 MSL2Q9HCI7 577 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 USE1Q9NZ43 259 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 DNAJC27Q9NZQ0 273 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 IKZF2Q9UKS7 526 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 USF3Q68DE3 2245 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 ARID1AO14497 2285 aa7.1□□□□□ -1.27
PSEN1-223ENST00000557511 ZSCAN5BA6NJL1 495 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 LRRC30A6NM36 301 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 ANKRD30BLA7E2S9 258 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 IQCF6A8MYZ5 107 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 PRKYO43930 277 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 MPZL2O60487 215 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 SELENOFO60613 162 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 ZNF254O75437 659 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 LY6G6DO95868 133 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 ADH4P08319 380 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 MRPL3P09001 348 aaKnown RBP7.09□□□□□ -1.27
PSEN1-223ENST00000557511 IRF2P14316 349 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 GIFP27352 417 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 GNALP38405 381 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 DDOSTP39656 456 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 CRYBB2P43320 205 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 MMP15P51511 669 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 RIDAP52758 137 aaKnown RBP7.09□□□□□ -1.27
PSEN1-223ENST00000557511 RIPPLY3P57055 190 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 DBPQ10586 325 aaPredicted RBP7.09□□□□□ -1.27
PSEN1-223ENST00000557511 CDK5R2Q13319 367 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 TMED1Q13445 227 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 HLXQ14774 488 aaPredicted RBP7.09□□□□□ -1.27
PSEN1-223ENST00000557511 TMEM249Q2WGJ8 235 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 GFOD2Q3B7J2 385 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 ZNF829Q3KNS6 432 aaPredicted RBP7.09□□□□□ -1.27
PSEN1-223ENST00000557511 C12orf73Q69YU5 71 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 Q6ZS46 218 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 COLCA1Q6ZS62 124 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 FAM57BQ71RH2 274 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 COMMD2Q86X83 199 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 SPERTQ8NA61 448 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 BHLHE23Q8NDY6 225 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 BBS1Q8NFJ9 593 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 ST7LQ8TDW4 575 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 CCL17Q92583 94 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 MRPL48Q96GC5 212 aaKnown RBP7.09□□□□□ -1.27
PSEN1-223ENST00000557511 SMR3AQ99954 134 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 GABARAPL3Q9BY60 117 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 VCXQ9H320 206 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 GSX1Q9H4S2 264 aaPredicted RBP7.09□□□□□ -1.27
PSEN1-223ENST00000557511 RGCCQ9H4X1 137 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 PNRC2Q9NPJ4 139 aaKnown RBP7.09□□□□□ -1.27
PSEN1-223ENST00000557511 C8orf4Q9NR00 106 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 YAE1D1Q9NRH1 226 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 ZNF275Q9NSD4 429 aaPredicted RBP7.09□□□□□ -1.27
PSEN1-223ENST00000557511 WARS2Q9UGM6 360 aaKnown RBP7.09□□□□□ -1.27
PSEN1-223ENST00000557511 IL19Q9UHD0 177 aa7.09□□□□□ -1.27
PSEN1-223ENST00000557511 TMEFF2Q9UIK5 374 aaPredicted RBP7.09□□□□□ -1.27
PSEN1-223ENST00000557511 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms