RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 GABRPO00591 440 aa2.41□□□□□ -2.02
SCFD1-221ENST00000556534 SLC19A2O60779 497 aa2.41□□□□□ -2.02
SCFD1-221ENST00000556534 HSBP1O75506 76 aa2.41□□□□□ -2.02
SCFD1-221ENST00000556534 EIF4EP06730 217 aaKnown RBP2.41□□□□□ -2.02
SCFD1-221ENST00000556534 IGHV1-8P0DP01 117 aa2.41□□□□□ -2.02
SCFD1-221ENST00000556534 CSKP41240 450 aa2.41□□□□□ -2.02
SCFD1-221ENST00000556534 ZNF121P58317 390 aaPredicted RBP2.41□□□□□ -2.02
SCFD1-221ENST00000556534 SLC39A6Q13433 755 aa2.41□□□□□ -2.02
SCFD1-221ENST00000556534 RCAN2Q14206 197 aa2.41□□□□□ -2.02
SCFD1-221ENST00000556534 POU2AF1Q16633 256 aa2.41□□□□□ -2.02
SCFD1-221ENST00000556534 C5orf64Q2M2E5 130 aa2.41□□□□□ -2.02
SCFD1-221ENST00000556534 Q3ZCU0 254 aa2.41□□□□□ -2.02
SCFD1-221ENST00000556534 KRTAP13-2Q52LG2 175 aa2.41□□□□□ -2.02
SCFD1-221ENST00000556534 GCSAMLQ5JQS6 135 aa2.41□□□□□ -2.02
SCFD1-221ENST00000556534 TPRG1LQ5T0D9 272 aa2.41□□□□□ -2.02
SCFD1-221ENST00000556534 C6orf183Q5T699 404 aa2.41□□□□□ -2.02
SCFD1-221ENST00000556534 TPTE2P1Q5T6R2 138 aa2.41□□□□□ -2.02
SCFD1-221ENST00000556534 SLC35D2Q76EJ3 337 aa2.41□□□□□ -2.02
SCFD1-221ENST00000556534 HMGN2P46Q86SG4 172 aa2.41□□□□□ -2.02
SCFD1-221ENST00000556534 HORMAD1Q86X24 394 aa2.41□□□□□ -2.02
SCFD1-221ENST00000556534 VKORC1L1Q8N0U8 176 aa2.41□□□□□ -2.02
SCFD1-221ENST00000556534 SPERTQ8NA61 448 aa2.41□□□□□ -2.02
SCFD1-221ENST00000556534 GATSQ8NAP1 163 aa2.41□□□□□ -2.02
SCFD1-221ENST00000556534 OR4S2Q8NH73 311 aa2.41□□□□□ -2.02
SCFD1-221ENST00000556534 SYNPRQ8TBG9 265 aa2.41□□□□□ -2.02
SCFD1-221ENST00000556534 APH1BQ8WW43 257 aa2.41□□□□□ -2.02
SCFD1-221ENST00000556534 TFGQ92734 400 aaPredicted RBP2.41□□□□□ -2.02
SCFD1-221ENST00000556534 TMEM230Q96A57 120 aa2.41□□□□□ -2.02
SCFD1-221ENST00000556534 CIDECQ96AQ7 238 aaPredicted RBP2.41□□□□□ -2.02
SCFD1-221ENST00000556534 RNF145Q96MT1 663 aa2.41□□□□□ -2.02
SCFD1-221ENST00000556534 MICU1Q9BPX6 476 aa2.41□□□□□ -2.02
SCFD1-221ENST00000556534 UQCC2Q9BRT2 126 aa2.41□□□□□ -2.02
SCFD1-221ENST00000556534 ZNF2Q9BSG1 426 aaPredicted RBP2.41□□□□□ -2.02
SCFD1-221ENST00000556534 CHRNA10Q9GZZ6 450 aa2.41□□□□□ -2.02
SCFD1-221ENST00000556534 NUP214P35658 2090 aaPredicted RBP2.41□□□□□ -2.02
SCFD1-221ENST00000556534 EIF4G1Q04637 1599 aaKnown RBP2.4□□□□□ -2.02
SCFD1-221ENST00000556534 A0A1W2PP18 115 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 GSTTP1A0A1W2PQM5 241 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 A6NDN8 102 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 H3BN98 237 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 H7C417 338 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 PSMD11O00231 422 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 RRP8O43159 456 aaKnown RBP2.4□□□□□ -2.03
SCFD1-221ENST00000556534 MPDU1O75352 247 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 ETHE1O95571 254 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 RAB3DO95716 219 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 CATP04040 527 aaKnown RBP2.4□□□□□ -2.03
SCFD1-221ENST00000556534 PGA5P0DJD9 388 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 F2RP25116 425 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 NPY1RP25929 384 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 CEACAM3P40198 252 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 CDKN2BP42772 138 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 FABP6P51161 128 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 ESRRGP62508 458 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 RAP1AP62834 184 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 PRR3P79522 188 aaKnown RBP2.4□□□□□ -2.03
SCFD1-221ENST00000556534 ERCC8Q13216 396 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 WDR82Q6UXN9 313 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 FBXW12Q6X9E4 464 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 OR2W3Q7Z3T1 314 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 OAFQ86UD1 273 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 UBALD2Q8IYN6 164 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 ARHGAP18Q8N392 663 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 C11orf72Q8NBR9 251 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 OR51E1Q8TCB6 317 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 ESR2Q92731 530 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 NRBF2Q96F24 287 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 AGMATQ9BSE5 352 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 TM6SF2Q9BZW4 377 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 KIR3DX1Q9H7L2 352 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 C12orf10Q9HB07 376 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 ZNF355PQ9NSJ1 428 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 MCUBQ9NWR8 336 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 MTFP1Q9UDX5 166 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 CFAP45Q9UL16 551 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 FLVCR2Q9UPI3 526 aa2.4□□□□□ -2.03
SCFD1-221ENST00000556534 IGHV5-10-1A0A0J9YXX1 117 aa2.39□□□□□ -2.03
SCFD1-221ENST00000556534 ZNF879B4DU55 563 aa2.39□□□□□ -2.03
SCFD1-221ENST00000556534 POLR1CO15160 346 aaPredicted RBP2.39□□□□□ -2.03
SCFD1-221ENST00000556534 HPRT1P00492 218 aa2.39□□□□□ -2.03
SCFD1-221ENST00000556534 PGA4P0DJD7 388 aa2.39□□□□□ -2.03
SCFD1-221ENST00000556534 PGA3P0DJD8 388 aa2.39□□□□□ -2.03
SCFD1-221ENST00000556534 ZNF14P17017 642 aaPredicted RBP2.39□□□□□ -2.03
SCFD1-221ENST00000556534 TCP1P17987 556 aaKnown RBP2.39□□□□□ -2.03
SCFD1-221ENST00000556534 CELP19835 753 aa2.39□□□□□ -2.03
SCFD1-221ENST00000556534 RAB3BP20337 219 aa2.39□□□□□ -2.03
SCFD1-221ENST00000556534 IVDP26440 423 aa2.39□□□□□ -2.03
SCFD1-221ENST00000556534 LCN1P31025 176 aa2.39□□□□□ -2.03
SCFD1-221ENST00000556534 CEACAM6P40199 344 aa2.39□□□□□ -2.03
SCFD1-221ENST00000556534 GPR4P46093 362 aa2.39□□□□□ -2.03
SCFD1-221ENST00000556534 CLDN6P56747 220 aa2.39□□□□□ -2.03
SCFD1-221ENST00000556534 STK38Q15208 465 aa2.39□□□□□ -2.03
SCFD1-221ENST00000556534 RGNQ15493 299 aa2.39□□□□□ -2.03
SCFD1-221ENST00000556534 HSP90AA4PQ58FG1 418 aa2.39□□□□□ -2.03
SCFD1-221ENST00000556534 FBXW9Q5XUX1 488 aa2.39□□□□□ -2.03
SCFD1-221ENST00000556534 ZNF880Q6PDB4 577 aa2.39□□□□□ -2.03
SCFD1-221ENST00000556534 NTM-AS1Q6ZSK4 140 aa2.39□□□□□ -2.03
SCFD1-221ENST00000556534 ABHD13Q7L211 337 aa2.39□□□□□ -2.03
SCFD1-221ENST00000556534 WDR86Q86TI4 376 aa2.39□□□□□ -2.03
SCFD1-221ENST00000556534 RIMKLAQ8IXN7 391 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms