RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 SRFP11831 508 aa14.37□□□□□ -0.11
TUBB3-209ENST00000555609 ZNF93P35789 620 aaPredicted RBP14.37□□□□□ -0.11
TUBB3-209ENST00000555609 LUMP51884 338 aaPredicted RBP14.37□□□□□ -0.11
TUBB3-209ENST00000555609 INPP5JQ15735 1006 aaPredicted RBP14.37□□□□□ -0.11
TUBB3-209ENST00000555609 KCNMB1Q16558 191 aa14.37□□□□□ -0.11
TUBB3-209ENST00000555609 ZNF239Q16600 458 aaKnown RBP14.37□□□□□ -0.11
TUBB3-209ENST00000555609 NAA40Q86UY6 237 aa14.37□□□□□ -0.11
TUBB3-209ENST00000555609 APCDD1LQ8NCL9 501 aa14.37□□□□□ -0.11
TUBB3-209ENST00000555609 TMEM185AQ8NFB2 350 aa14.37□□□□□ -0.11
TUBB3-209ENST00000555609 OR2AJ1Q8NGZ0 328 aa14.37□□□□□ -0.11
TUBB3-209ENST00000555609 STT3BQ8TCJ2 826 aa14.37□□□□□ -0.11
TUBB3-209ENST00000555609 FBXW5Q969U6 566 aa14.37□□□□□ -0.11
TUBB3-209ENST00000555609 MRGPRFQ96AM1 343 aa14.37□□□□□ -0.11
TUBB3-209ENST00000555609 TAS2R3Q9NYW6 316 aa14.37□□□□□ -0.11
TUBB3-209ENST00000555609 IGHG1P01857 330 aa14.36□□□□□ -0.11
TUBB3-209ENST00000555609 DCNP07585 359 aaKnown RBP14.36□□□□□ -0.11
TUBB3-209ENST00000555609 CCL1P22362 96 aa14.36□□□□□ -0.11
TUBB3-209ENST00000555609 PSMB6P28072 239 aa14.36□□□□□ -0.11
TUBB3-209ENST00000555609 HRH1P35367 487 aa14.36□□□□□ -0.11
TUBB3-209ENST00000555609 ZNF41P51814 821 aaPredicted RBP14.36□□□□□ -0.11
TUBB3-209ENST00000555609 ATP1B3P54709 279 aa14.36□□□□□ -0.11
TUBB3-209ENST00000555609 FBXW4P57775 412 aa14.36□□□□□ -0.11
TUBB3-209ENST00000555609 FOXF1Q12946 379 aa14.36□□□□□ -0.11
TUBB3-209ENST00000555609 CCDC157Q569K6 752 aa14.36□□□□□ -0.11
TUBB3-209ENST00000555609 NSUN5P2Q63ZY6 315 aa14.36□□□□□ -0.11
TUBB3-209ENST00000555609 AWAT2Q6E213 333 aa14.36□□□□□ -0.11
TUBB3-209ENST00000555609 ANGPTL5Q86XS5 388 aa14.36□□□□□ -0.11
TUBB3-209ENST00000555609 UEVLDQ8IX04 471 aa14.36□□□□□ -0.11
TUBB3-209ENST00000555609 RELL2Q8NC24 303 aaPredicted RBP14.36□□□□□ -0.11
TUBB3-209ENST00000555609 MARC2Q969Z3 335 aa14.36□□□□□ -0.11
TUBB3-209ENST00000555609 SLC6A15Q9H2J7 730 aa14.36□□□□□ -0.11
TUBB3-209ENST00000555609 MED29Q9NX70 200 aa14.36□□□□□ -0.11
TUBB3-209ENST00000555609 MYEF2Q9P2K5 600 aaKnown RBP14.36□□□□□ -0.11
TUBB3-209ENST00000555609 GHRLQ9UBU3 117 aa14.36□□□□□ -0.11
TUBB3-209ENST00000555609 KIF26BQ2KJY2 2108 aa14.36□□□□□ -0.11
TUBB3-209ENST00000555609 F8VVB4 439 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 F8VWA3 439 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 CSN2P05814 226 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 HEXBP07686 556 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 EMP2P54851 167 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 CLRN1P58418 232 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 FOXK1P85037 733 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 TMEM128Q5BJH2 165 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 C17orf107Q6ZR85 190 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 TMPRSS9Q7Z410 1059 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 DEFB119Q8N690 84 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 NOXO1Q8NFA2 376 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 OR4K15Q8NH41 348 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 TERB2Q8NHR7 220 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 SELENOIQ9C0D9 397 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 B3GAT1Q9P2W7 334 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 KCNK7Q9Y2U2 307 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 TEX13DA0A0J9YY54 714 aaPredicted RBP14.35□□□□□ -0.11
TUBB3-209ENST00000555609 LOC101059948A0A1B0GTJ6 334 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 LOC102725191A0A1B0GVB3 256 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 SSX5O60225 188 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 MTRF1O75570 445 aaKnown RBP14.35□□□□□ -0.11
TUBB3-209ENST00000555609 CRHP06850 196 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 GIMD1P0DJR0 217 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 NR2C1P13056 603 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 PPIAP62937 165 aaKnown RBP14.35□□□□□ -0.11
TUBB3-209ENST00000555609 SLC25A47Q6Q0C1 308 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 OR52H1Q8NGJ2 320 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 OR10S1Q8NGN2 331 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 OR6X1Q8NH79 312 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 NUDCD2Q8WVJ2 157 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 SEC22AQ96IW7 307 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 OCSTAMPQ9BR26 566 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 LPAR5Q9H1C0 372 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 WDR13Q9H1Z4 485 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 PTGES2Q9H7Z7 377 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 PPP4R1LQ9P1A2 415 aa14.35□□□□□ -0.11
TUBB3-209ENST00000555609 OR2AT4A6NND4 320 aa14.34□□□□□ -0.11
TUBB3-209ENST00000555609 F5H0A9 414 aaPredicted RBP14.34□□□□□ -0.11
TUBB3-209ENST00000555609 FGF16O43320 207 aa14.34□□□□□ -0.11
TUBB3-209ENST00000555609 PGA4P0DJD7 388 aa14.34□□□□□ -0.11
TUBB3-209ENST00000555609 PGA3P0DJD8 388 aa14.34□□□□□ -0.11
TUBB3-209ENST00000555609 GNB3P16520 340 aa14.34□□□□□ -0.11
TUBB3-209ENST00000555609 ACY1Q03154 408 aa14.34□□□□□ -0.11
TUBB3-209ENST00000555609 SQSTM1Q13501 440 aa14.34□□□□□ -0.11
TUBB3-209ENST00000555609 DOK3Q7L591 496 aa14.34□□□□□ -0.11
TUBB3-209ENST00000555609 ZNF101Q8IZC7 436 aa14.34□□□□□ -0.11
TUBB3-209ENST00000555609 GVQW1Q8N7I0 195 aa14.34□□□□□ -0.11
TUBB3-209ENST00000555609 OR56B1Q8NGI3 324 aa14.34□□□□□ -0.11
TUBB3-209ENST00000555609 OR13C9Q8NGT0 318 aa14.34□□□□□ -0.11
TUBB3-209ENST00000555609 CMBLQ96DG6 245 aa14.34□□□□□ -0.11
TUBB3-209ENST00000555609 URM1Q9BTM9 101 aaKnown RBP14.34□□□□□ -0.11
TUBB3-209ENST00000555609 SLC7A5P2Q9GIP4 190 aa14.34□□□□□ -0.11
TUBB3-209ENST00000555609 CHMP1AQ9HD42 196 aaPredicted RBP14.34□□□□□ -0.11
TUBB3-209ENST00000555609 RAB18Q9NP72 206 aa14.34□□□□□ -0.11
TUBB3-209ENST00000555609 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.34□□□□□ -0.11
TUBB3-209ENST00000555609 SLC22A11Q9NSA0 550 aa14.34□□□□□ -0.11
TUBB3-209ENST00000555609 MRPS28Q9Y2Q9 187 aaKnown RBP14.34□□□□□ -0.11
TUBB3-209ENST00000555609 CCSO14618 274 aa14.33□□□□□ -0.11
TUBB3-209ENST00000555609 ABCD4O14678 606 aa14.33□□□□□ -0.11
TUBB3-209ENST00000555609 TSPAN9O75954 239 aa14.33□□□□□ -0.11
TUBB3-209ENST00000555609 ONECUT2O95948 504 aa14.33□□□□□ -0.11
TUBB3-209ENST00000555609 APOC3P02656 99 aa14.33□□□□□ -0.11
TUBB3-209ENST00000555609 CYC1P08574 325 aa14.33□□□□□ -0.11
TUBB3-209ENST00000555609 TPT1P13693 172 aaKnown RBP14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms