RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 CBR1P16152 277 aa8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 ZNF12P17014 697 aa8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 ZNF20P17024 532 aa8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 RAB3BP20337 219 aa8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 ANOS1P23352 680 aa8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 RORCP51449 518 aa8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 IDH3GP51553 393 aaPredicted RBP8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 CAV3P56539 151 aa8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 HGFACQ04756 655 aa8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 HNRNPA0Q13151 305 aaKnown RBP8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 TBC1D28Q2M2D7 210 aa8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 SNAI3Q3KNW1 292 aa8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 ALKBH2Q6NS38 261 aa8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 STAC2Q6ZMT1 411 aa8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 DOK3Q7L591 496 aa8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 PRSS45Q7RTY3 260 aa8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 TPRA1Q86W33 373 aa8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 WDR31Q8NA23 367 aa8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 RELL2Q8NC24 303 aaPredicted RBP8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 SLC30A7Q8NEW0 376 aa8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 OR52H1Q8NGJ2 320 aa8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 OR1J2Q8NGS2 313 aa8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 MCFD2Q8NI22 146 aa8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 ASB5Q8WWX0 329 aa8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 TMEM106AQ96A25 262 aa8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 FGGYQ96C11 551 aa8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 BOD1Q96IK1 185 aa8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 CDH20Q9HBT6 801 aa8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 TCF7L1Q9HCS4 588 aa8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 OBP2BQ9NPH6 170 aa8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 ELOVL5Q9NYP7 299 aa8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 BOD1L1Q8NFC6 3051 aa8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 DSPP15924 2871 aaKnown RBP8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 PRRC2CQ9Y520 2896 aaKnown RBP8.39□□□□□ -1.07
HNRNPC-220ENST00000555585 A0A0U1RQV5 110 aa8.38□□□□□ -1.07
HNRNPC-220ENST00000555585 A0A1B0GTI1 187 aa8.38□□□□□ -1.07
HNRNPC-220ENST00000555585 SHISA3A0PJX4 238 aa8.38□□□□□ -1.07
HNRNPC-220ENST00000555585 ANKRD61A6NGH8 418 aa8.38□□□□□ -1.07
HNRNPC-220ENST00000555585 LMX1BO60663 402 aa8.38□□□□□ -1.07
HNRNPC-220ENST00000555585 CELA3BP08861 270 aa8.38□□□□□ -1.07
HNRNPC-220ENST00000555585 ZNF14P17017 642 aaPredicted RBP8.38□□□□□ -1.07
HNRNPC-220ENST00000555585 SRMP19623 302 aa8.38□□□□□ -1.07
HNRNPC-220ENST00000555585 PSMB1P20618 241 aaKnown RBP8.38□□□□□ -1.07
HNRNPC-220ENST00000555585 GNALP38405 381 aa8.38□□□□□ -1.07
HNRNPC-220ENST00000555585 FAM27E3Q08E93 113 aa8.38□□□□□ -1.07
HNRNPC-220ENST00000555585 ZNF404Q494X3 552 aa8.38□□□□□ -1.07
HNRNPC-220ENST00000555585 GLYATL3Q5SZD4 288 aa8.38□□□□□ -1.07
HNRNPC-220ENST00000555585 FJX1Q86VR8 437 aa8.38□□□□□ -1.07
HNRNPC-220ENST00000555585 ZNF584Q8IVC4 421 aa8.38□□□□□ -1.07
HNRNPC-220ENST00000555585 STEAP2Q8NFT2 490 aa8.38□□□□□ -1.07
HNRNPC-220ENST00000555585 OR2AE1Q8NHA4 323 aa8.38□□□□□ -1.07
HNRNPC-220ENST00000555585 SLC25A46Q96AG3 418 aa8.38□□□□□ -1.07
HNRNPC-220ENST00000555585 SGK3Q96BR1 496 aa8.38□□□□□ -1.07
HNRNPC-220ENST00000555585 S100PBPQ96BU1 408 aa8.38□□□□□ -1.07
HNRNPC-220ENST00000555585 MUCL1Q96DR8 90 aa8.38□□□□□ -1.07
HNRNPC-220ENST00000555585 REEP6Q96HR9 211 aa8.38□□□□□ -1.07
HNRNPC-220ENST00000555585 POM121L2Q96KW2 1035 aa8.38□□□□□ -1.07
HNRNPC-220ENST00000555585 LYZL4Q96KX0 146 aa8.38□□□□□ -1.07
HNRNPC-220ENST00000555585 C1QTNF5Q9BXJ0 243 aa8.38□□□□□ -1.07
HNRNPC-220ENST00000555585 ZNF275Q9NSD4 429 aaPredicted RBP8.38□□□□□ -1.07
HNRNPC-220ENST00000555585 COQ3Q9NZJ6 369 aa8.38□□□□□ -1.07
HNRNPC-220ENST00000555585 EIF3KQ9UBQ5 218 aaKnown RBP8.38□□□□□ -1.07
HNRNPC-220ENST00000555585 CKLFQ9UBR5 152 aa8.38□□□□□ -1.07
HNRNPC-220ENST00000555585 AK6Q9Y3D8 172 aaKnown RBP8.38□□□□□ -1.07
HNRNPC-220ENST00000555585 A6NIN4 97 aa8.37□□□□□ -1.07
HNRNPC-220ENST00000555585 C16orf97H3BN30 126 aa8.37□□□□□ -1.07
HNRNPC-220ENST00000555585 ST8SIA5O15466 376 aa8.37□□□□□ -1.07
HNRNPC-220ENST00000555585 XRCC2O43543 280 aa8.37□□□□□ -1.07
HNRNPC-220ENST00000555585 MTRF1O75570 445 aaKnown RBP8.37□□□□□ -1.07
HNRNPC-220ENST00000555585 CLPXO76031 633 aa8.37□□□□□ -1.07
HNRNPC-220ENST00000555585 MAS1P04201 325 aa8.37□□□□□ -1.07
HNRNPC-220ENST00000555585 CCL1P22362 96 aa8.37□□□□□ -1.07
HNRNPC-220ENST00000555585 OR10A3P58181 314 aa8.37□□□□□ -1.07
HNRNPC-220ENST00000555585 MALLQ13021 153 aa8.37□□□□□ -1.07
HNRNPC-220ENST00000555585 PPA1Q15181 289 aa8.37□□□□□ -1.07
HNRNPC-220ENST00000555585 TIMM23BQ5SRD1 257 aa8.37□□□□□ -1.07
HNRNPC-220ENST00000555585 CCDC54Q8NEL0 328 aa8.37□□□□□ -1.07
HNRNPC-220ENST00000555585 OR14K1Q8NGZ2 314 aa8.37□□□□□ -1.07
HNRNPC-220ENST00000555585 PRR7Q8TB68 274 aa8.37□□□□□ -1.07
HNRNPC-220ENST00000555585 AKAP1Q92667 903 aaKnown RBP eCLIP8.37□□□□□ -1.07
HNRNPC-220ENST00000555585 APOBEC3DQ96AK3 386 aaPredicted RBP8.37□□□□□ -1.07
HNRNPC-220ENST00000555585 ZNF75AQ96N20 296 aa8.37□□□□□ -1.07
HNRNPC-220ENST00000555585 SOX7Q9BT81 388 aa8.37□□□□□ -1.07
HNRNPC-220ENST00000555585 BARHL1Q9BZE3 327 aa8.37□□□□□ -1.07
HNRNPC-220ENST00000555585 ACTR6Q9GZN1 396 aa8.37□□□□□ -1.07
HNRNPC-220ENST00000555585 SLIRPQ9GZT3 109 aaKnown RBP8.37□□□□□ -1.07
HNRNPC-220ENST00000555585 C6orf62Q9GZU0 229 aaPredicted RBP8.37□□□□□ -1.07
HNRNPC-220ENST00000555585 OR51B6Q9H340 312 aa8.37□□□□□ -1.07
HNRNPC-220ENST00000555585 PLEKHA1Q9HB21 404 aa8.37□□□□□ -1.07
HNRNPC-220ENST00000555585 TAS2R4Q9NYW5 299 aa8.37□□□□□ -1.07
HNRNPC-220ENST00000555585 PTTG3PQ9NZH4 202 aa8.37□□□□□ -1.07
HNRNPC-220ENST00000555585 JKAMPQ9P055 326 aa8.37□□□□□ -1.07
HNRNPC-220ENST00000555585 SLC25A15Q9Y619 301 aa8.37□□□□□ -1.07
HNRNPC-220ENST00000555585 PMF1-BGLAPU3KQ54 211 aa8.37□□□□□ -1.07
HNRNPC-220ENST00000555585 SPENQ96T58 3664 aaKnown RBP8.37□□□□□ -1.07
HNRNPC-220ENST00000555585 TRAV8-7A0A075B6U6 113 aa8.36□□□□□ -1.07
HNRNPC-220ENST00000555585 A0A1B0GUH1 482 aa8.36□□□□□ -1.07
HNRNPC-220ENST00000555585 ANXA2P2A6NMY6 339 aa8.36□□□□□ -1.07
HNRNPC-220ENST00000555585 FAM90A27PA6NNH2 459 aa8.36□□□□□ -1.07
HNRNPC-220ENST00000555585 M0R1B8 84 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms