RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 XKRYO14609 159 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 PDCD5O14737 125 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 CNOT4O95628 575 aaKnown RBP8.62□□□□□ -1.03
PSEN1-213ENST00000555386 TACSTD2P09758 323 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 FAM157BP0CG42 384 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 PGA4P0DJD7 388 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 PGA3P0DJD8 388 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 IGFBP2P18065 325 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 COX5AP20674 150 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 HOXC12P31275 282 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 CENPAP49450 140 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 PITPNAQ00169 270 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 TGFBR3Q03167 851 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 TP53I3Q53FA7 332 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 YIF1BQ5BJH7 314 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 ATAD3CQ5T2N8 411 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 ZNF684Q5T5D7 378 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 LINC01590Q5TEZ4 76 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 KLHL24Q6TFL4 600 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 SLC16A9Q7RTY1 509 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 SAMD12Q8N8I0 201 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 NOXO1Q8NFA2 376 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 SLC7A6Q92536 515 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 RFT1Q96AA3 541 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 MUCL1Q96DR8 90 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 ST6GAL2Q96JF0 529 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 SPOCK3Q9BQ16 436 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 MARVELD1Q9BSK0 173 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 ALG12Q9BV10 488 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 MRI1Q9BV20 369 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 LINC00470Q9BZP3 86 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 MMP28Q9H239 520 aa8.62□□□□□ -1.03
PSEN1-213ENST00000555386 PPIL3Q9H2H8 161 aaKnown RBP8.62□□□□□ -1.03
PSEN1-213ENST00000555386 HRNRQ86YZ3 2850 aaPredicted RBP8.61□□□□□ -1.03
PSEN1-213ENST00000555386 TRBV2A0A0J9YWF9 115 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 LINC00854A0A1B0GVQ3 168 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 FAM240BA0A1B0GVZ2 78 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 PHYHO14832 338 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 RGS13O14921 159 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 ORC5O43913 435 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 UBL3O95164 117 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 THBDP07204 575 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 EPXP11678 715 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 B4GALT1P15291 398 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 CDAP32320 146 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 NAA10P41227 235 aaPredicted RBP8.61□□□□□ -1.03
PSEN1-213ENST00000555386 ZNF83P51522 516 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 RPS11P62280 158 aaKnown RBP eCLIP8.61□□□□□ -1.03
PSEN1-213ENST00000555386 BTG1P62324 171 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 TLE4Q04727 773 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 PPA1Q15181 289 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 GABRA6Q16445 453 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 NDUFA5Q16718 116 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 ZFP69Q49AA0 526 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 MESTQ5EB52 335 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 LEG1Q6P5S2 330 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 LRFN4Q6PJG9 635 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 ZNF813Q6ZN06 617 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 HDDC2Q7Z4H3 204 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.61□□□□□ -1.03
PSEN1-213ENST00000555386 TMEM200AQ86VY9 491 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 OR4M1Q8NGD0 313 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 OR1K1Q8NGR3 316 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 OR2T4Q8NH00 348 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 ZNF519Q8TB69 540 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 TRMT10AQ8TBZ6 339 aaKnown RBP8.61□□□□□ -1.03
PSEN1-213ENST00000555386 FAM222BQ8WU58 562 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 TMEM54Q969K7 222 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 MCHR2Q969V1 340 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 CREB3L1Q96BA8 519 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 PIK3IP1Q96FE7 263 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 WACQ9BTA9 647 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 TRAF4Q9BUZ4 470 aaPredicted RBP8.61□□□□□ -1.03
PSEN1-213ENST00000555386 RPRD1BQ9NQG5 326 aaKnown RBP8.61□□□□□ -1.03
PSEN1-213ENST00000555386 GNG8Q9UK08 70 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 POU2F3Q9UKI9 436 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 ZNF281Q9Y2X9 895 aa8.61□□□□□ -1.03
PSEN1-213ENST00000555386 ITPR2Q14571 2701 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 IGKV1D-43A0A0B4J1Z2 117 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 A0A0G2JMP0 313 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 A0A0X1KG70 313 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 A0A1W2PPL8 197 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 A6NIZ1 184 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 OR5H1A6NKK0 313 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 CENPXA8MT69 81 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 M0R1B8 84 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 CTDSPLO15194 276 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 DHHO43323 396 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 SELENOFO60613 162 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 RENP00797 406 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 IGHMP01871 453 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 EIF4EP06730 217 aaKnown RBP8.6□□□□□ -1.03
PSEN1-213ENST00000555386 PATE4P0C8F1 98 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 PSKH1P11801 424 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 CD79AP11912 226 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 PRF1P14222 555 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 MAPK3P27361 379 aaPredicted RBP8.6□□□□□ -1.03
PSEN1-213ENST00000555386 CDKN2AP42771 156 aaKnown RBP8.6□□□□□ -1.03
PSEN1-213ENST00000555386 ZNF84P51523 738 aa8.6□□□□□ -1.03
PSEN1-213ENST00000555386 RAB25P57735 213 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms