RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 NXF5Q9H1B4 397 aaKnown RBP9.55□□□□□ -0.88
MTHFD1-210ENST00000555252 FBLN5Q9UBX5 448 aa9.55□□□□□ -0.88
MTHFD1-210ENST00000555252 MIOXQ9UGB7 285 aa9.55□□□□□ -0.88
MTHFD1-210ENST00000555252 CACFD1Q9UGQ2 172 aa9.55□□□□□ -0.88
MTHFD1-210ENST00000555252 TMED7Q9Y3B3 224 aa9.55□□□□□ -0.88
MTHFD1-210ENST00000555252 TMEM184BQ9Y519 407 aaPredicted RBP9.55□□□□□ -0.88
MTHFD1-210ENST00000555252 DMRT1Q9Y5R6 373 aa9.55□□□□□ -0.88
MTHFD1-210ENST00000555252 EYSQ5T1H1 3165 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 IGKV3D-11A0A0A0MRZ8 115 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 ZNF729A6NN14 1252 aaPredicted RBP9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 METTL12A8MUP2 240 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 DCTN6O00399 190 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 OIP5O43482 229 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 GAPDHP04406 335 aaKnown RBP9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 IGKV3-11P04433 115 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 IFNA6P05013 189 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 VAMP1P23763 118 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 MAS1LP35410 378 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 RIDAP52758 137 aaKnown RBP9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 GXYLT1Q4G148 440 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 NSUN5P2Q63ZY6 315 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 CORO6Q6QEF8 472 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 RHOUQ7L0Q8 258 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 KCTD9Q7L273 389 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 MDGA2Q7Z553 956 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 TRAPPC6BQ86SZ2 158 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 LSRQ86X29 649 aaPredicted RBP9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 LYPD6Q86Y78 171 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 ADIPOR1Q96A54 375 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 NECAB3Q96P71 396 aaPredicted RBP9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 MOGAT1Q96PD6 335 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 LPAR4Q99677 370 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 SULT4A1Q9BR01 284 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 OCSTAMPQ9BR26 566 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 SLC5A7Q9GZV3 580 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 KCNK15Q9H427 330 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 PPP4R1LQ9P1A2 415 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 DHCR7Q9UBM7 475 aaKnown RBP9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 GDF2Q9UK05 429 aaPredicted RBP9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 ANAPC10Q9UM13 185 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 HHLA2Q9UM44 414 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 MRPS18BQ9Y676 258 aaKnown RBP9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 TRAV36DV7A0A075B6V5 113 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 TMEM235A6NFC5 223 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 OR2W5A6NFC9 320 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 LMO7DNF2Z398 122 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 SFT2D2O95562 160 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 MT-ATP6P00846 226 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 CSTBP04080 98 aaKnown RBP9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 FBXO45P0C2W1 286 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 CXCR1P25024 350 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 IL12BP29460 328 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 RAB5CP51148 216 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 GFERP55789 205 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 HNRNPKP61978 463 aaKnown RBP eCLIP9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 EGR4Q05215 589 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 RPL18Q07020 188 aaKnown RBP9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 FABP9Q0Z7S8 132 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 SGCAQ16586 387 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 MEP1BQ16820 701 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 C14orf28Q4W4Y0 310 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 HLA-DQA1Q5Y7H0 255 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 RBMS3Q6XE24 437 aaKnown RBP9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 CD163Q86VB7 1156 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 ARRDC1Q8N5I2 433 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 CADM4Q8NFZ8 388 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 SNIP1Q8TAD8 396 aaKnown RBP9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 WNT2BQ93097 391 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 RRNAD1Q96FB5 475 aaKnown RBP9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 SLC25A44Q96H78 314 aaPredicted RBP9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 KIRREL1Q96J84 757 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 ELF4Q99607 663 aaPredicted RBP9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 CMKLR1Q99788 373 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 HRH4Q9H3N8 390 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 TMEM231Q9H6L2 316 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 TAS2R4Q9NYW5 299 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 KCNG2Q9UJ96 466 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 GTF2A1LQ9UNN4 478 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 MEMO1Q9Y316 297 aa9.54□□□□□ -0.88
MTHFD1-210ENST00000555252 F5P12259 2224 aa9.53□□□□□ -0.88
MTHFD1-210ENST00000555252 RHPN2P1A8MT19 583 aa9.53□□□□□ -0.88
MTHFD1-210ENST00000555252 AP4M1O00189 453 aa9.53□□□□□ -0.88
MTHFD1-210ENST00000555252 RAB27BO00194 218 aa9.53□□□□□ -0.88
MTHFD1-210ENST00000555252 BPNT1O95861 308 aa9.53□□□□□ -0.88
MTHFD1-210ENST00000555252 DDAH2O95865 285 aa9.53□□□□□ -0.88
MTHFD1-210ENST00000555252 PLGP00747 810 aaPredicted RBP9.53□□□□□ -0.88
MTHFD1-210ENST00000555252 ZNF14P17017 642 aaPredicted RBP9.53□□□□□ -0.88
MTHFD1-210ENST00000555252 PGCP20142 388 aa9.53□□□□□ -0.88
MTHFD1-210ENST00000555252 CPT2P23786 658 aa9.53□□□□□ -0.88
MTHFD1-210ENST00000555252 DNASE1L1P49184 302 aa9.53□□□□□ -0.88
MTHFD1-210ENST00000555252 ARL4DP49703 201 aa9.53□□□□□ -0.88
MTHFD1-210ENST00000555252 RAB1AP62820 205 aa9.53□□□□□ -0.88
MTHFD1-210ENST00000555252 HGFACQ04756 655 aa9.53□□□□□ -0.88
MTHFD1-210ENST00000555252 VAX1Q5SQQ9 334 aa9.53□□□□□ -0.88
MTHFD1-210ENST00000555252 CBLN3Q6UW01 205 aa9.53□□□□□ -0.88
MTHFD1-210ENST00000555252 WDSUB1Q8N9V3 476 aa9.53□□□□□ -0.88
MTHFD1-210ENST00000555252 ZNF721Q8TF20 911 aa9.53□□□□□ -0.88
MTHFD1-210ENST00000555252 CASTOR1Q8WTX7 329 aa9.53□□□□□ -0.88
MTHFD1-210ENST00000555252 DAZLQ92904 295 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms