RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 ZDHHC11Q9H8X9 412 aa1.06□□□□□ -2.24
PRPF39-208ENST00000554785 SLC40A1Q9NP59 571 aa1.06□□□□□ -2.24
PRPF39-208ENST00000554785 UFSP2Q9NUQ7 469 aa1.06□□□□□ -2.24
PRPF39-208ENST00000554785 KLHL28Q9NXS3 571 aa1.06□□□□□ -2.24
PRPF39-208ENST00000554785 OR12D3Q9UGF7 316 aa1.06□□□□□ -2.24
PRPF39-208ENST00000554785 PTBP2Q9UKA9 531 aaKnown RBP1.06□□□□□ -2.24
PRPF39-208ENST00000554785 PRPF19Q9UMS4 504 aaKnown RBP1.06□□□□□ -2.24
PRPF39-208ENST00000554785 CELA1Q9UNI1 258 aa1.06□□□□□ -2.24
PRPF39-208ENST00000554785 SLC17A4Q9Y2C5 497 aa1.06□□□□□ -2.24
PRPF39-208ENST00000554785 IFT52Q9Y366 437 aa1.06□□□□□ -2.24
PRPF39-208ENST00000554785 PLCE1Q9P212 2302 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 ARHGAP32A7KAX9 2087 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 TENM2Q9NT68 2774 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 A0A0G2JRQ6 117 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 A0A1B0GUS0 222 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 FAM231BA6NCW3 169 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 HELTA6NFD8 242 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 GABRR3A8MPY1 467 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 TRDCB7Z8K6 153 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 PES1O00541 588 aaKnown RBP1.05□□□□□ -2.24
PRPF39-208ENST00000554785 RTL8CO15255 209 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 EMC8O43402 210 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 MMP23AO75900 390 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 LY6HO94772 140 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 CDK14O94921 469 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 SNAPINO95295 136 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 AP2A1O95782 977 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 ACTL6AO96019 429 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 IGLV3-25P01717 112 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 SLC2A3P11169 496 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 COX5AP20674 150 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 CALRP27797 417 aaKnown RBP1.05□□□□□ -2.24
PRPF39-208ENST00000554785 PSMB5P28074 263 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 PRDX3P30048 256 aaKnown RBP1.05□□□□□ -2.24
PRPF39-208ENST00000554785 MAP3K8P41279 467 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 GRIA1P42261 906 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 EFNB2P52799 333 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 UBE2IP63279 158 aaKnown RBP1.05□□□□□ -2.24
PRPF39-208ENST00000554785 DCDP81605 110 aaKnown RBP1.05□□□□□ -2.24
PRPF39-208ENST00000554785 PLGLB1Q02325 96 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 RIPK1Q13546 671 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 PDK3Q15120 406 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 CYTH1Q15438 398 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 DPYSL2Q16555 572 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 CLEC12BQ2HXU8 276 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 EXOC3L2Q2M3D2 409 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 NKAIN1Q4KMZ8 207 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 KLF17Q5JT82 389 aaPredicted RBP1.05□□□□□ -2.24
PRPF39-208ENST00000554785 C6orf52Q5T4I8 152 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 FAM151BQ6UXP7 276 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 CCDC73Q6ZRK6 1079 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 GDPD3Q7L5L3 318 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 NLRP9Q7RTR0 991 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF550Q7Z398 422 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 ZNF547Q8IVP9 402 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 SLC35F2Q8IXU6 374 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 TBC1D21Q8IYX1 336 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 OR2L13Q8N349 312 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 KIF2BQ8N4N8 673 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 NPWQ8N729 165 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 OR52I1Q8NGK6 324 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 JOSD2Q8TAC2 188 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 C7orf33Q8WU49 177 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 DNAJA4Q8WW22 397 aaPredicted RBP1.05□□□□□ -2.24
PRPF39-208ENST00000554785 ST8SIA1Q92185 356 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 EFHD2Q96C19 240 aaPredicted RBP1.05□□□□□ -2.24
PRPF39-208ENST00000554785 SEC22AQ96IW7 307 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 IMMP1LQ96LU5 166 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 JSRP1Q96MG2 331 aaPredicted RBP1.05□□□□□ -2.24
PRPF39-208ENST00000554785 RBM14Q96PK6 669 aaKnown RBP1.05□□□□□ -2.24
PRPF39-208ENST00000554785 TBX15Q96SF7 602 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 ARHGDIGQ99819 225 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 CCT7Q99832 543 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 C11orf70Q9BRQ4 267 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 VCX2Q9H322 139 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 OR51J1Q9H342 316 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 SRMSQ9H3Y6 488 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 NARFLQ9H6Q4 476 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 PLEKHF2Q9H8W4 249 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 CYP3A43Q9HB55 503 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 SH2D2AQ9NP31 389 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 ABCB10Q9NRK6 738 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 SMOXQ9NWM0 555 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 SMPD3Q9NY59 655 aaPredicted RBP1.05□□□□□ -2.24
PRPF39-208ENST00000554785 TREM2Q9NZC2 230 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 BTNL2Q9UIR0 455 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 C3orf18Q9UK00 162 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 STAP1Q9ULZ2 295 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 COPS3Q9UNS2 423 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 POLDIP2Q9Y2S7 368 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 UGT2A1Q9Y4X1 527 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 TIMM10BQ9Y5J6 103 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 HEATR1Q9H583 2144 aaKnown RBP1.05□□□□□ -2.24
PRPF39-208ENST00000554785 ANK3Q12955 4377 aaKnown RBP1.05□□□□□ -2.24
PRPF39-208ENST00000554785 TENM3Q9P273 2699 aa1.05□□□□□ -2.24
PRPF39-208ENST00000554785 TRAV26-1A0A087WT03 109 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 A0A0G2JMM0 328 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 A0A0J9YXY3 114 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 LOC100653049A0A140TA62 436 aa1.04□□□□□ -2.24
PRPF39-208ENST00000554785 A0A1W2PPB8 328 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms