RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 MTRF1O75570 445 aaKnown RBP12.45□□□□□ -0.42
SHOX2-206ENST00000554685 ARL6IP5O75915 188 aa12.45□□□□□ -0.42
SHOX2-206ENST00000554685 CD2P06729 351 aa12.45□□□□□ -0.42
SHOX2-206ENST00000554685 FGF9P31371 208 aaPredicted RBP12.45□□□□□ -0.42
SHOX2-206ENST00000554685 CRYBB2P43320 205 aa12.45□□□□□ -0.42
SHOX2-206ENST00000554685 FABP5Q01469 135 aa12.45□□□□□ -0.42
SHOX2-206ENST00000554685 Q499Y3 187 aa12.45□□□□□ -0.42
SHOX2-206ENST00000554685 TMEM108Q6UXF1 575 aa12.45□□□□□ -0.42
SHOX2-206ENST00000554685 DOK3Q7L591 496 aa12.45□□□□□ -0.42
SHOX2-206ENST00000554685 TSEN15Q8WW01 171 aaKnown RBP12.45□□□□□ -0.42
SHOX2-206ENST00000554685 ISOC1Q96CN7 298 aa12.45□□□□□ -0.42
SHOX2-206ENST00000554685 C1QTNF6Q9BXI9 259 aa12.45□□□□□ -0.42
SHOX2-206ENST00000554685 OR51E2Q9H255 320 aa12.45□□□□□ -0.42
SHOX2-206ENST00000554685 DHDHQ9UQ10 334 aa12.45□□□□□ -0.42
SHOX2-206ENST00000554685 SPEF1Q9Y4P9 236 aa12.45□□□□□ -0.42
SHOX2-206ENST00000554685 ESPL1Q14674 2120 aa12.44□□□□□ -0.42
SHOX2-206ENST00000554685 NCOA6Q14686 2063 aaPredicted RBP12.44□□□□□ -0.42
SHOX2-206ENST00000554685 TRBV5-5A0A0J9YX44 114 aa12.44□□□□□ -0.42
SHOX2-206ENST00000554685 LOC390937A0A1W2PQ73 354 aa12.44□□□□□ -0.42
SHOX2-206ENST00000554685 ZNF879B4DU55 563 aa12.44□□□□□ -0.42
SHOX2-206ENST00000554685 P2RY10O00398 339 aa12.44□□□□□ -0.42
SHOX2-206ENST00000554685 SLC22A1O15245 554 aa12.44□□□□□ -0.42
SHOX2-206ENST00000554685 ATE1O95260 518 aa12.44□□□□□ -0.42
SHOX2-206ENST00000554685 CRYAAP02489 173 aa12.44□□□□□ -0.42
SHOX2-206ENST00000554685 RAF1P04049 648 aa12.44□□□□□ -0.42
SHOX2-206ENST00000554685 CELA3BP08861 270 aa12.44□□□□□ -0.42
SHOX2-206ENST00000554685 OCM2P0CE71 109 aa12.44□□□□□ -0.42
SHOX2-206ENST00000554685 CCL1P22362 96 aa12.44□□□□□ -0.42
SHOX2-206ENST00000554685 PTAFRP25105 342 aa12.44□□□□□ -0.42
SHOX2-206ENST00000554685 RAD52P43351 418 aa12.44□□□□□ -0.42
SHOX2-206ENST00000554685 ZNF83P51522 516 aa12.44□□□□□ -0.42
SHOX2-206ENST00000554685 HGFACQ04756 655 aa12.44□□□□□ -0.42
SHOX2-206ENST00000554685 ODF4Q2M2E3 257 aa12.44□□□□□ -0.42
SHOX2-206ENST00000554685 ACSM3Q53FZ2 586 aa12.44□□□□□ -0.42
SHOX2-206ENST00000554685 SLC16A12Q6ZSM3 486 aa12.44□□□□□ -0.42
SHOX2-206ENST00000554685 NAA40Q86UY6 237 aa12.44□□□□□ -0.42
SHOX2-206ENST00000554685 WFDC8Q8IUA0 241 aa12.44□□□□□ -0.42
SHOX2-206ENST00000554685 KBTBD8Q8NFY9 601 aa12.44□□□□□ -0.42
SHOX2-206ENST00000554685 OR51E1Q8TCB6 317 aa12.44□□□□□ -0.42
SHOX2-206ENST00000554685 BCL2L14Q9BZR8 327 aa12.44□□□□□ -0.42
SHOX2-206ENST00000554685 DHRS7CA6NNS2 312 aa12.43□□□□□ -0.42
SHOX2-206ENST00000554685 GPX5O75715 221 aa12.43□□□□□ -0.42
SHOX2-206ENST00000554685 SC5DO75845 299 aa12.43□□□□□ -0.42
SHOX2-206ENST00000554685 IGLV3-1P01715 115 aa12.43□□□□□ -0.42
SHOX2-206ENST00000554685 EPXP11678 715 aa12.43□□□□□ -0.42
SHOX2-206ENST00000554685 CCL2P13500 99 aa12.43□□□□□ -0.42
SHOX2-206ENST00000554685 ZNF35P13682 527 aa12.43□□□□□ -0.42
SHOX2-206ENST00000554685 MYL9P24844 172 aa12.43□□□□□ -0.42
SHOX2-206ENST00000554685 RPS11P62280 158 aaKnown RBP eCLIP12.43□□□□□ -0.42
SHOX2-206ENST00000554685 NAAAQ02083 359 aa12.43□□□□□ -0.42
SHOX2-206ENST00000554685 CTF1Q16619 201 aa12.43□□□□□ -0.42
SHOX2-206ENST00000554685 GFOD2Q3B7J2 385 aa12.43□□□□□ -0.42
SHOX2-206ENST00000554685 SNAI3Q3KNW1 292 aa12.43□□□□□ -0.42
SHOX2-206ENST00000554685 ZMAT1Q5H9K5 638 aa12.43□□□□□ -0.42
SHOX2-206ENST00000554685 ALKBH2Q6NS38 261 aa12.43□□□□□ -0.42
SHOX2-206ENST00000554685 SEZ6L2Q6UXD5 910 aa12.43□□□□□ -0.42
SHOX2-206ENST00000554685 UNQ9370/PRO34162Q6UXP9 181 aa12.43□□□□□ -0.42
SHOX2-206ENST00000554685 CEACAM19Q7Z692 300 aa12.43□□□□□ -0.42
SHOX2-206ENST00000554685 OR13C3Q8NGS6 347 aa12.43□□□□□ -0.42
SHOX2-206ENST00000554685 RGP1Q92546 391 aaPredicted RBP12.43□□□□□ -0.42
SHOX2-206ENST00000554685 PPP1R14AQ96A00 147 aa12.43□□□□□ -0.42
SHOX2-206ENST00000554685 SPSB4Q96A44 273 aa12.43□□□□□ -0.42
SHOX2-206ENST00000554685 C10orf35Q96D05 121 aa12.43□□□□□ -0.42
SHOX2-206ENST00000554685 REEP6Q96HR9 211 aa12.43□□□□□ -0.42
SHOX2-206ENST00000554685 KCTD7Q96MP8 289 aa12.43□□□□□ -0.42
SHOX2-206ENST00000554685 NAA50Q9GZZ1 169 aaKnown RBP12.43□□□□□ -0.42
SHOX2-206ENST00000554685 SLITRK2Q9H156 845 aa12.43□□□□□ -0.42
SHOX2-206ENST00000554685 GPR84Q9NQS5 396 aa12.43□□□□□ -0.42
SHOX2-206ENST00000554685 TXNL4BQ9NX01 149 aaKnown RBP12.43□□□□□ -0.42
SHOX2-206ENST00000554685 IGHV2OR16-5A0A0B4J2B6 119 aa12.42□□□□□ -0.42
SHOX2-206ENST00000554685 TUBAL3A6NHL2 446 aa12.42□□□□□ -0.42
SHOX2-206ENST00000554685 SMPD2O60906 423 aa12.42□□□□□ -0.42
SHOX2-206ENST00000554685 DHRS3O75911 302 aa12.42□□□□□ -0.42
SHOX2-206ENST00000554685 UCHL1P09936 223 aa12.42□□□□□ -0.42
SHOX2-206ENST00000554685 WNT5AP41221 380 aa12.42□□□□□ -0.42
SHOX2-206ENST00000554685 MAP2K3P46734 347 aa12.42□□□□□ -0.42
SHOX2-206ENST00000554685 UCP2P55851 309 aa12.42□□□□□ -0.42
SHOX2-206ENST00000554685 RPS23P62266 143 aaKnown RBP12.42□□□□□ -0.42
SHOX2-206ENST00000554685 TFF3Q07654 80 aa12.42□□□□□ -0.42
SHOX2-206ENST00000554685 HSD17B12Q53GQ0 312 aa12.42□□□□□ -0.42
SHOX2-206ENST00000554685 GLYATL3Q5SZD4 288 aa12.42□□□□□ -0.42
SHOX2-206ENST00000554685 C22orf42Q6IC83 251 aa12.42□□□□□ -0.42
SHOX2-206ENST00000554685 MYO7BQ6PIF6 2116 aa12.42□□□□□ -0.42
SHOX2-206ENST00000554685 TMEM91Q6ZNR0 172 aa12.42□□□□□ -0.42
SHOX2-206ENST00000554685 Q6ZSR3 168 aa12.42□□□□□ -0.42
SHOX2-206ENST00000554685 USP43Q70EL4 1123 aa12.42□□□□□ -0.42
SHOX2-206ENST00000554685 MRPL21Q7Z2W9 205 aaKnown RBP12.42□□□□□ -0.42
SHOX2-206ENST00000554685 MYPOPQ86VE0 399 aaPredicted RBP12.42□□□□□ -0.42
SHOX2-206ENST00000554685 RDH10Q8IZV5 341 aa12.42□□□□□ -0.42
SHOX2-206ENST00000554685 PLPP7Q8NBV4 271 aa12.42□□□□□ -0.42
SHOX2-206ENST00000554685 OR13C5Q8NGS8 318 aa12.42□□□□□ -0.42
SHOX2-206ENST00000554685 RPL3LQ92901 407 aaKnown RBP12.42□□□□□ -0.42
SHOX2-206ENST00000554685 TMEM106AQ96A25 262 aa12.42□□□□□ -0.42
SHOX2-206ENST00000554685 SGK3Q96BR1 496 aa12.42□□□□□ -0.42
SHOX2-206ENST00000554685 C12orf43Q96C57 262 aaKnown RBP12.42□□□□□ -0.42
SHOX2-206ENST00000554685 ZC3HAV1LQ96H79 300 aaKnown RBP12.42□□□□□ -0.42
SHOX2-206ENST00000554685 FAM71F1Q96KD3 344 aaPredicted RBP12.42□□□□□ -0.42
SHOX2-206ENST00000554685 WFIKKN1Q96NZ8 548 aa12.42□□□□□ -0.42
SHOX2-206ENST00000554685 DERL3Q96Q80 235 aa12.42□□□□□ -0.42
SHOX2-206ENST00000554685 OR14A2Q96R54 314 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms