RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 LMO4P61968 165 aa9.02□□□□□ -0.97
SHMT2-213ENST00000554600 GRB2P62993 217 aaKnown RBP9.02□□□□□ -0.97
SHMT2-213ENST00000554600 CDK5Q00535 292 aa9.02□□□□□ -0.97
SHMT2-213ENST00000554600 SNAI3Q3KNW1 292 aa9.02□□□□□ -0.97
SHMT2-213ENST00000554600 KRTAP27-1Q3LI81 207 aa9.02□□□□□ -0.97
SHMT2-213ENST00000554600 TEX30Q5JUR7 227 aa9.02□□□□□ -0.97
SHMT2-213ENST00000554600 DRAM2Q6UX65 266 aa9.02□□□□□ -0.97
SHMT2-213ENST00000554600 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.02□□□□□ -0.97
SHMT2-213ENST00000554600 ZDHHC13Q8IUH4 622 aa9.02□□□□□ -0.97
SHMT2-213ENST00000554600 BBS1Q8NFJ9 593 aa9.02□□□□□ -0.97
SHMT2-213ENST00000554600 OR51F2Q8NH61 342 aa9.02□□□□□ -0.97
SHMT2-213ENST00000554600 ST7LQ8TDW4 575 aa9.02□□□□□ -0.97
SHMT2-213ENST00000554600 THEM6Q8WUY1 208 aa9.02□□□□□ -0.97
SHMT2-213ENST00000554600 UTP4Q969X6 686 aaKnown RBP9.02□□□□□ -0.97
SHMT2-213ENST00000554600 ABHD6Q9BV23 337 aa9.02□□□□□ -0.97
SHMT2-213ENST00000554600 SLC25A19Q9HC21 320 aa9.02□□□□□ -0.97
SHMT2-213ENST00000554600 BRD7Q9NPI1 651 aa9.02□□□□□ -0.97
SHMT2-213ENST00000554600 TMEM106BQ9NUM4 274 aa9.02□□□□□ -0.97
SHMT2-213ENST00000554600 HIF1ANQ9NWT6 349 aa9.02□□□□□ -0.97
SHMT2-213ENST00000554600 DCAF16Q9NXF7 216 aa9.02□□□□□ -0.97
SHMT2-213ENST00000554600 NPTNQ9Y639 398 aa9.02□□□□□ -0.97
SHMT2-213ENST00000554600 PRODHO43272 600 aa9.01□□□□□ -0.97
SHMT2-213ENST00000554600 MITFO75030 526 aaPredicted RBP9.01□□□□□ -0.97
SHMT2-213ENST00000554600 MSMBP08118 114 aa9.01□□□□□ -0.97
SHMT2-213ENST00000554600 H2BFMP0C1H6 154 aa9.01□□□□□ -0.97
SHMT2-213ENST00000554600 ANPEPP15144 967 aa9.01□□□□□ -0.97
SHMT2-213ENST00000554600 DVL1P1P54792 670 aaPredicted RBP9.01□□□□□ -0.97
SHMT2-213ENST00000554600 ZNF92Q03936 586 aa9.01□□□□□ -0.97
SHMT2-213ENST00000554600 APOFQ13790 326 aa9.01□□□□□ -0.97
SHMT2-213ENST00000554600 PCK2Q16822 640 aa9.01□□□□□ -0.97
SHMT2-213ENST00000554600 TIGD6Q17RP2 521 aa9.01□□□□□ -0.97
SHMT2-213ENST00000554600 GFOD2Q3B7J2 385 aa9.01□□□□□ -0.97
SHMT2-213ENST00000554600 GLYATL3Q5SZD4 288 aa9.01□□□□□ -0.97
SHMT2-213ENST00000554600 FAHD1Q6P587 224 aa9.01□□□□□ -0.97
SHMT2-213ENST00000554600 ASRGL1Q7L266 308 aa9.01□□□□□ -0.97
SHMT2-213ENST00000554600 MOGAT3Q86VF5 341 aa9.01□□□□□ -0.97
SHMT2-213ENST00000554600 ZNF420Q8TAQ5 688 aaPredicted RBP9.01□□□□□ -0.97
SHMT2-213ENST00000554600 LRTOMTQ8WZ04 291 aa9.01□□□□□ -0.97
SHMT2-213ENST00000554600 TMEM186Q96B77 213 aa9.01□□□□□ -0.97
SHMT2-213ENST00000554600 MEGF10Q96KG7 1140 aa9.01□□□□□ -0.97
SHMT2-213ENST00000554600 SLC30A2Q9BRI3 323 aa9.01□□□□□ -0.97
SHMT2-213ENST00000554600 PRRG3Q9BZD7 231 aa9.01□□□□□ -0.97
SHMT2-213ENST00000554600 SEMA6AQ9H2E6 1030 aa9.01□□□□□ -0.97
SHMT2-213ENST00000554600 TOR3AQ9H497 397 aa9.01□□□□□ -0.97
SHMT2-213ENST00000554600 SP140LQ9H930 580 aa9.01□□□□□ -0.97
SHMT2-213ENST00000554600 TRAV20A0A0B4J274 112 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 C5orf63A6NC05 138 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 SAC3D1A6NKF1 404 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 LRRC30A6NM36 301 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 CD300LBA8K4G0 201 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 M0R129 80 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 MLNRO43193 412 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 XRCC2O43543 280 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 ZNF205O95201 554 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 IGHV2-5P01817 119 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 APOC1P02654 83 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 LYNP07948 512 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 MRPL3P09001 348 aaKnown RBP9□□□□□ -0.97
SHMT2-213ENST00000554600 IRF2P14316 349 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 CA6P23280 308 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 OTX1P32242 354 aaPredicted RBP9□□□□□ -0.97
SHMT2-213ENST00000554600 MMP16P51512 607 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 ESRRGP62508 458 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 PTGES3Q15185 160 aaKnown RBP9□□□□□ -0.97
SHMT2-213ENST00000554600 OR8G1Q15617 311 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 SLC35D3Q5M8T2 416 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 LCN1P1Q5VSP4 162 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 FAHD2BQ6P2I3 314 aaPredicted RBP9□□□□□ -0.97
SHMT2-213ENST00000554600 FAM57BQ71RH2 274 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 TIGD4Q8IY51 512 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 KLHL36Q8N4N3 616 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 SPICQ8N5J4 248 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 ZNF454Q8N9F8 522 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 RNF133Q8WVZ7 376 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 FAHD2AQ96GK7 314 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 C1orf159Q96HA4 380 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 PGAM5Q96HS1 289 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 AMELYQ99218 206 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 ADAT1Q9BUB4 502 aaKnown RBP9□□□□□ -0.97
SHMT2-213ENST00000554600 REPIN1Q9BWE0 567 aaKnown RBP9□□□□□ -0.97
SHMT2-213ENST00000554600 MARCH7Q9H992 704 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 GCM1Q9NP62 436 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 UFSP2Q9NUQ7 469 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 H2AFY2Q9P0M6 372 aaPredicted RBP9□□□□□ -0.97
SHMT2-213ENST00000554600 LAMP5Q9UJQ1 280 aa9□□□□□ -0.97
SHMT2-213ENST00000554600 NOP16Q9Y3C1 178 aaKnown RBP9□□□□□ -0.97
SHMT2-213ENST00000554600 ANK3Q12955 4377 aaKnown RBP9□□□□□ -0.97
SHMT2-213ENST00000554600 IFNL4K9M1U5 179 aa8.99□□□□□ -0.97
SHMT2-213ENST00000554600 PLPP2O43688 288 aa8.99□□□□□ -0.97
SHMT2-213ENST00000554600 PRKYO43930 277 aa8.99□□□□□ -0.97
SHMT2-213ENST00000554600 CYB5R3P00387 301 aaPredicted RBP8.99□□□□□ -0.97
SHMT2-213ENST00000554600 IGHV2-70P01814 119 aa8.99□□□□□ -0.97
SHMT2-213ENST00000554600 ANOS1P23352 680 aa8.99□□□□□ -0.97
SHMT2-213ENST00000554600 ZNF121P58317 390 aaPredicted RBP8.99□□□□□ -0.97
SHMT2-213ENST00000554600 BTG1P62324 171 aa8.99□□□□□ -0.97
SHMT2-213ENST00000554600 LCN2P80188 198 aa8.99□□□□□ -0.97
SHMT2-213ENST00000554600 ZMYND11Q15326 602 aa8.99□□□□□ -0.97
SHMT2-213ENST00000554600 PRAMEF6Q5VXH4 476 aa8.99□□□□□ -0.97
SHMT2-213ENST00000554600 KRT77Q7Z794 578 aa8.99□□□□□ -0.97
SHMT2-213ENST00000554600 PARP8Q8N3A8 854 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms