RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 FBXO4Q9UKT5 387 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 NUP210LQ5VU65 1888 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 CEP192Q8TEP8 1941 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 COL5A1P20908 1838 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-207ENST00000553837 H3BSH0 61 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 CCSO14618 274 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 ADAM10O14672 748 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 TXNL1O43396 289 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 CDC40O60508 579 aaKnown RBP eCLIP10.94□□□□□ -0.66
SHMT2-207ENST00000553837 AMY2AP04746 511 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 FAM157CP0CG43 387 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 RCC1P18754 421 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-207ENST00000553837 CAV2P51636 162 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 EFNB2P52799 333 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 DMWDQ09019 674 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 BIKQ13323 160 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 C16orf47Q6ZP98 133 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-207ENST00000553837 GALNT16Q8N428 558 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 D2HGDHQ8N465 521 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 OR4K17Q8NGC6 315 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 OR51D1Q8NGF3 324 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 OR10R2Q8NGX6 335 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 OR10AC1Q8NH08 325 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 HIST1H2BAQ96A08 127 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 CCDC74AQ96AQ1 378 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 CPNE2Q96FN4 548 aaPredicted RBP10.94□□□□□ -0.66
SHMT2-207ENST00000553837 VN1R1Q9GZP7 353 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 WWTR1Q9GZV5 400 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 SYT4Q9H2B2 425 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 SLCO5A1Q9H2Y9 848 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 GRHPRQ9UBQ7 328 aa10.94□□□□□ -0.66
SHMT2-207ENST00000553837 IGHV3-20A0A0C4DH32 117 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 C11orf98E9PRG8 122 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 RNASEK-C17orf49H0YIS7 233 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 TCAPO15273 167 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 SFTA3P0C7M3 94 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 ZNF14P17017 642 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-207ENST00000553837 FBLP22087 321 aaKnown RBP10.93□□□□□ -0.66
SHMT2-207ENST00000553837 PMELP40967 661 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 HTR5AP47898 357 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 RBM39Q14498 530 aaKnown RBP10.93□□□□□ -0.66
SHMT2-207ENST00000553837 SSPNQ14714 243 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 NR0B2Q15466 257 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 DNLZQ5SXM8 178 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 OR10K2Q6IF99 312 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 LRRC69Q6ZNQ3 347 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 SVIPQ8NHG7 77 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 FOXRED1Q96CU9 486 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-207ENST00000553837 SAT2Q96F10 170 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-207ENST00000553837 GGACTQ9BVM4 153 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 ARID1BQ8NFD5 2236 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-207ENST00000553837 EIF1AYO14602 144 aaKnown RBP10.93□□□□□ -0.66
SHMT2-207ENST00000553837 SMAD9O15198 467 aaKnown RBP10.93□□□□□ -0.66
SHMT2-207ENST00000553837 PLGP00747 810 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-207ENST00000553837 IGHV2-5P01817 119 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 PGAM2P15259 253 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 PSMB6P28072 239 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 IL12BP29460 328 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 EIF1AXP47813 144 aaKnown RBP10.93□□□□□ -0.66
SHMT2-207ENST00000553837 ARL4DP49703 201 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 TOMM20Q15388 145 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 OR7A5Q15622 319 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 MST1LQ2TV78 715 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 TMEM244Q5VVB8 128 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 DPY19L4Q7Z388 723 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 DPPA2Q7Z7J5 298 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 LYG2Q86SG7 212 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 CARFQ8N187 725 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 ZNF441Q8N8Z8 693 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 OR51A4Q8NGJ6 313 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 OR6N2Q8NGY6 317 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 TMED6Q8WW62 240 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 SEH1LQ96EE3 360 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 MVB12AQ96EY5 273 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 CLCC1Q96S66 551 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 PHB2Q99623 299 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 NUDT22Q9BRQ3 303 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 ATG5Q9H1Y0 275 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 UBE2ZQ9H832 354 aaPredicted RBP10.93□□□□□ -0.66
SHMT2-207ENST00000553837 LPAR3Q9UBY5 353 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 TP53TG5Q9Y2B4 290 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 FAM96BQ9Y3D0 163 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 CFAP54Q96N23 3096 aa10.93□□□□□ -0.66
SHMT2-207ENST00000553837 ADAMTS20P59510 1910 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 TRAV8-7A0A075B6U6 113 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 TRBV5-7A0A0A0MS05 114 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 ALG1L2C9J202 215 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 M0QYG6 137 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 ZNF354AO60765 605 aaPredicted RBP10.92□□□□□ -0.66
SHMT2-207ENST00000553837 ALOX5APP20292 161 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 ZBTB25P24278 435 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 CFPP27918 469 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 RAB5CP51148 216 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 PLCXD2Q0VAA5 305 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 ODF4Q2M2E3 257 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 C2orf76Q3KRA6 126 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 ARHGAP40Q5TG30 622 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 SLC25A42Q86VD7 318 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 PRSS35Q8N3Z0 413 aa10.92□□□□□ -0.66
SHMT2-207ENST00000553837 ARRDC1Q8N5I2 433 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms