RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 CTLA4P16410 223 aa13.96□□□□□ -0.17
ACTN1-209ENST00000553659 PSMD7P51665 324 aa13.96□□□□□ -0.17
ACTN1-209ENST00000553659 RIN1Q13671 783 aa13.96□□□□□ -0.17
ACTN1-209ENST00000553659 TSC22D1Q15714 1073 aa13.96□□□□□ -0.17
ACTN1-209ENST00000553659 PCK2Q16822 640 aa13.96□□□□□ -0.17
ACTN1-209ENST00000553659 TMEM176BQ3YBM2 270 aaPredicted RBP13.96□□□□□ -0.17
ACTN1-209ENST00000553659 TMEM225Q6GV28 225 aa13.96□□□□□ -0.17
ACTN1-209ENST00000553659 SFXN4Q6P4A7 337 aa13.96□□□□□ -0.17
ACTN1-209ENST00000553659 FAM131AQ6UXB0 335 aa13.96□□□□□ -0.17
ACTN1-209ENST00000553659 TFAP2EQ6VUC0 442 aa13.96□□□□□ -0.17
ACTN1-209ENST00000553659 LSRQ86X29 649 aaPredicted RBP13.96□□□□□ -0.17
ACTN1-209ENST00000553659 LRRC28Q86X40 367 aaPredicted RBP13.96□□□□□ -0.17
ACTN1-209ENST00000553659 TUSC5Q8IXB3 177 aa13.96□□□□□ -0.17
ACTN1-209ENST00000553659 OR10H5Q8NGA6 315 aa13.96□□□□□ -0.17
ACTN1-209ENST00000553659 OR5AK2Q8NH90 309 aa13.96□□□□□ -0.17
ACTN1-209ENST00000553659 ABHD3Q8WU67 409 aa13.96□□□□□ -0.17
ACTN1-209ENST00000553659 HSD17B8Q92506 261 aa13.96□□□□□ -0.17
ACTN1-209ENST00000553659 CPNE4Q96A23 557 aaPredicted RBP13.96□□□□□ -0.17
ACTN1-209ENST00000553659 SLC25A44Q96H78 314 aaPredicted RBP13.96□□□□□ -0.17
ACTN1-209ENST00000553659 USB1Q9BQ65 265 aaKnown RBP13.96□□□□□ -0.17
ACTN1-209ENST00000553659 SRRQ9GZT4 340 aa13.96□□□□□ -0.17
ACTN1-209ENST00000553659 ZCCHC4Q9H5U6 513 aa13.96□□□□□ -0.17
ACTN1-209ENST00000553659 GP6Q9HCN6 339 aa13.96□□□□□ -0.17
ACTN1-209ENST00000553659 V9GYH0 126 aa13.96□□□□□ -0.17
ACTN1-209ENST00000553659 SONP18583 2426 aaKnown RBP13.96□□□□□ -0.17
ACTN1-209ENST00000553659 YLPM1P49750 1951 aaKnown RBP13.96□□□□□ -0.18
ACTN1-209ENST00000553659 SPARCP09486 303 aa13.95□□□□□ -0.18
ACTN1-209ENST00000553659 HLA-DOBP13765 273 aa13.95□□□□□ -0.18
ACTN1-209ENST00000553659 ZNF43P17038 809 aa13.95□□□□□ -0.18
ACTN1-209ENST00000553659 IL32P24001 234 aa13.95□□□□□ -0.18
ACTN1-209ENST00000553659 APEX1P27695 318 aaKnown RBP13.95□□□□□ -0.18
ACTN1-209ENST00000553659 SHC1P29353 583 aa13.95□□□□□ -0.18
ACTN1-209ENST00000553659 SFTPDP35247 375 aa13.95□□□□□ -0.18
ACTN1-209ENST00000553659 TALDO1P37837 337 aa13.95□□□□□ -0.18
ACTN1-209ENST00000553659 P2RY4P51582 365 aa13.95□□□□□ -0.18
ACTN1-209ENST00000553659 RIDAP52758 137 aaKnown RBP13.95□□□□□ -0.18
ACTN1-209ENST00000553659 BIDP55957 195 aa13.95□□□□□ -0.18
ACTN1-209ENST00000553659 CLRN1P58418 232 aa13.95□□□□□ -0.18
ACTN1-209ENST00000553659 IFITM3Q01628 133 aa13.95□□□□□ -0.18
ACTN1-209ENST00000553659 SLC17A1Q14916 467 aa13.95□□□□□ -0.18
ACTN1-209ENST00000553659 TAB1Q15750 504 aa13.95□□□□□ -0.18
ACTN1-209ENST00000553659 Q499Y3 187 aa13.95□□□□□ -0.18
ACTN1-209ENST00000553659 STEAP3Q658P3 488 aa13.95□□□□□ -0.18
ACTN1-209ENST00000553659 LYPD4Q6UWN0 246 aa13.95□□□□□ -0.18
ACTN1-209ENST00000553659 NUFIP2Q7Z417 695 aaKnown RBP13.95□□□□□ -0.18
ACTN1-209ENST00000553659 KRT77Q7Z794 578 aa13.95□□□□□ -0.18
ACTN1-209ENST00000553659 GLB1L2Q8IW92 636 aa13.95□□□□□ -0.18
ACTN1-209ENST00000553659 NOXO1Q8NFA2 376 aa13.95□□□□□ -0.18
ACTN1-209ENST00000553659 OR52N5Q8NH56 324 aa13.95□□□□□ -0.18
ACTN1-209ENST00000553659 DNAJA3Q96EY1 480 aa13.95□□□□□ -0.18
ACTN1-209ENST00000553659 MRPL13Q9BYD1 178 aaKnown RBP13.95□□□□□ -0.18
ACTN1-209ENST00000553659 SRXN1Q9BYN0 137 aa13.95□□□□□ -0.18
ACTN1-209ENST00000553659 TTTY10Q9BZA0 68 aa13.95□□□□□ -0.18
ACTN1-209ENST00000553659 MIXL1Q9H2W2 232 aa13.95□□□□□ -0.18
ACTN1-209ENST00000553659 MRPL22Q9NWU5 206 aaKnown RBP13.95□□□□□ -0.18
ACTN1-209ENST00000553659 B3GAT1Q9P2W7 334 aa13.95□□□□□ -0.18
ACTN1-209ENST00000553659 COMMD3Q9UBI1 195 aa13.95□□□□□ -0.18
ACTN1-209ENST00000553659 COA3Q9Y2R0 106 aaPredicted RBP13.95□□□□□ -0.18
ACTN1-209ENST00000553659 FBN1P35555 2871 aaKnown RBP13.95□□□□□ -0.18
ACTN1-209ENST00000553659 COL6A5A8TX70 2615 aa13.94□□□□□ -0.18
ACTN1-209ENST00000553659 TRBV5-5A0A0J9YX44 114 aa13.94□□□□□ -0.18
ACTN1-209ENST00000553659 SHISA3A0PJX4 238 aa13.94□□□□□ -0.18
ACTN1-209ENST00000553659 ZNF726A6NNF4 738 aa13.94□□□□□ -0.18
ACTN1-209ENST00000553659 YES1P07947 543 aa13.94□□□□□ -0.18
ACTN1-209ENST00000553659 DCTDP32321 178 aa13.94□□□□□ -0.18
ACTN1-209ENST00000553659 PSMB10P40306 273 aa13.94□□□□□ -0.18
ACTN1-209ENST00000553659 RPS11P62280 158 aaKnown RBP eCLIP13.94□□□□□ -0.18
ACTN1-209ENST00000553659 SCN1BQ07699 218 aa13.94□□□□□ -0.18
ACTN1-209ENST00000553659 EIF2B1Q14232 305 aaKnown RBP13.94□□□□□ -0.18
ACTN1-209ENST00000553659 P2RY6Q15077 328 aa13.94□□□□□ -0.18
ACTN1-209ENST00000553659 ZNF672Q499Z4 452 aaPredicted RBP13.94□□□□□ -0.18
ACTN1-209ENST00000553659 IDNKQ5T6J7 187 aa13.94□□□□□ -0.18
ACTN1-209ENST00000553659 BAIAP2L2Q6UXY1 529 aa13.94□□□□□ -0.18
ACTN1-209ENST00000553659 NHLRC1Q6VVB1 395 aa13.94□□□□□ -0.18
ACTN1-209ENST00000553659 POC5Q8NA72 575 aa13.94□□□□□ -0.18
ACTN1-209ENST00000553659 SLC26A10Q8NG04 563 aa13.94□□□□□ -0.18
ACTN1-209ENST00000553659 OR2G2Q8NGZ5 317 aa13.94□□□□□ -0.18
ACTN1-209ENST00000553659 GPR148Q8TDV2 347 aa13.94□□□□□ -0.18
ACTN1-209ENST00000553659 NEUROG1Q92886 237 aa13.94□□□□□ -0.18
ACTN1-209ENST00000553659 SF3B5Q9BWJ5 86 aaKnown RBP13.94□□□□□ -0.18
ACTN1-209ENST00000553659 SLCO5A1Q9H2Y9 848 aa13.94□□□□□ -0.18
ACTN1-209ENST00000553659 KLHDC2Q9Y2U9 406 aa13.94□□□□□ -0.18
ACTN1-209ENST00000553659 A0A1W2PNR3 127 aa13.93□□□□□ -0.18
ACTN1-209ENST00000553659 GPR171O14626 319 aa13.93□□□□□ -0.18
ACTN1-209ENST00000553659 TRAF3IP2O43734 574 aaPredicted RBP13.93□□□□□ -0.18
ACTN1-209ENST00000553659 ZFPL1O95159 310 aa13.93□□□□□ -0.18
ACTN1-209ENST00000553659 LAP3P28838 519 aa13.93□□□□□ -0.18
ACTN1-209ENST00000553659 CDKN1AP38936 164 aa13.93□□□□□ -0.18
ACTN1-209ENST00000553659 EVX1P49640 407 aa13.93□□□□□ -0.18
ACTN1-209ENST00000553659 DBPQ10586 325 aaPredicted RBP13.93□□□□□ -0.18
ACTN1-209ENST00000553659 INSL4Q14641 139 aa13.93□□□□□ -0.18
ACTN1-209ENST00000553659 MEP1BQ16820 701 aa13.93□□□□□ -0.18
ACTN1-209ENST00000553659 C11orf91Q3C1V1 193 aa13.93□□□□□ -0.18
ACTN1-209ENST00000553659 DNM1P46Q6ZS02 220 aa13.93□□□□□ -0.18
ACTN1-209ENST00000553659 FCRLAQ7L513 359 aa13.93□□□□□ -0.18
ACTN1-209ENST00000553659 OR8H2Q8N162 312 aa13.93□□□□□ -0.18
ACTN1-209ENST00000553659 KDM8Q8N371 416 aa13.93□□□□□ -0.18
ACTN1-209ENST00000553659 ZNF676Q8N7Q3 588 aa13.93□□□□□ -0.18
ACTN1-209ENST00000553659 C4orf45Q96LM5 186 aa13.93□□□□□ -0.18
ACTN1-209ENST00000553659 PDCD1LG2Q9BQ51 273 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms