RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 MOB4Q9Y3A3 225 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 ARL5AQ9Y689 179 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 NUP160Q12769 1436 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 CNTLNQ9NXG0 1405 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 MSH6P52701 1360 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 CEMIPQ8WUJ3 1361 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 USP47Q96K76 1375 aa2.98□□□□□ -1.93
TDP1-207ENST00000553617 CHD4Q14839 1912 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 ABCB11O95342 1321 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 ADGRA3Q8IWK6 1321 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.97□□□□□ -1.93
TDP1-207ENST00000553617 IGHV3-35A0A0C4DH35 117 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 VPS37CA5D8V6 355 aaPredicted RBP2.97□□□□□ -1.93
TDP1-207ENST00000553617 CCDC182A6NF36 153 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 SLC22A20A6NK97 555 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 IDSB3KWA1 339 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 PSMD12O00232 456 aaPredicted RBP2.97□□□□□ -1.93
TDP1-207ENST00000553617 PSTPIP1O43586 416 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 GLSO94925 669 aaPredicted RBP2.97□□□□□ -1.93
TDP1-207ENST00000553617 TSPAN13O95857 204 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 ORM1P02763 201 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 CD5P06127 495 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 FOLR2P14207 255 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 KCNE1P15382 129 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 ADORA2BP29275 332 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 SSTR5P35346 364 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 DDOSTP39656 456 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 KIR2DS2P43631 304 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 RPL29P47914 159 aaKnown RBP2.97□□□□□ -1.93
TDP1-207ENST00000553617 DNASE1L1P49184 302 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 ACOT2P49753 483 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 FGF8P55075 233 aaPredicted RBP2.97□□□□□ -1.93
TDP1-207ENST00000553617 RPS15AP62244 130 aaKnown RBP2.97□□□□□ -1.93
TDP1-207ENST00000553617 RANP62826 216 aaKnown RBP2.97□□□□□ -1.93
TDP1-207ENST00000553617 RBX1P62877 108 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 RPL32P62910 135 aaKnown RBP2.97□□□□□ -1.93
TDP1-207ENST00000553617 RPL19P84098 196 aaKnown RBP2.97□□□□□ -1.93
TDP1-207ENST00000553617 TFAMQ00059 246 aaKnown RBP2.97□□□□□ -1.93
TDP1-207ENST00000553617 RUNX3Q13761 415 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 PTGES3Q15185 160 aaKnown RBP2.97□□□□□ -1.93
TDP1-207ENST00000553617 FCN2Q15485 313 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 LRRC36Q1X8D7 754 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 TMEM176BQ3YBM2 270 aaPredicted RBP2.97□□□□□ -1.93
TDP1-207ENST00000553617 SOHLH1Q5JUK2 328 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 PPM1LQ5SGD2 360 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 CYB5R2Q6BCY4 276 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.97□□□□□ -1.93
TDP1-207ENST00000553617 DRAM2Q6UX65 266 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 SLC25A42Q86VD7 318 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 STPG2Q8N412 459 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 ZNF561Q8N587 486 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 OR51D1Q8NGF3 324 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 OR10W1Q8NGF6 305 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 OR2Y1Q8NGV0 311 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 OR6K2Q8NGY2 324 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 LHFPL5Q8TAF8 219 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 GPR151Q8TDV0 419 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 RORBQ92753 470 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 CENPNQ96H22 339 aaPredicted RBP2.97□□□□□ -1.93
TDP1-207ENST00000553617 ITCHQ96J02 903 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 QKIQ96PU8 341 aaKnown RBP eCLIP2.97□□□□□ -1.93
TDP1-207ENST00000553617 UBXN6Q9BZV1 441 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 ACTR3CQ9C0K3 210 aaPredicted RBP2.97□□□□□ -1.93
TDP1-207ENST00000553617 DEFB129Q9H1M3 183 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 DHX35Q9H5Z1 703 aaKnown RBP2.97□□□□□ -1.93
TDP1-207ENST00000553617 NHEJ1Q9H9Q4 299 aaPredicted RBP2.97□□□□□ -1.93
TDP1-207ENST00000553617 RHOFQ9HBH0 211 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 BEX1Q9HBH7 125 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 EML4Q9HC35 981 aaKnown RBP2.97□□□□□ -1.93
TDP1-207ENST00000553617 ISYNA1Q9NPH2 558 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 TAS2R1Q9NYW7 299 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 DPM3Q9P2X0 92 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 KLHL21Q9UJP4 597 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 ZNF225Q9UK10 706 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 ACOT9Q9Y305 439 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 SAR1BQ9Y6B6 198 aa2.97□□□□□ -1.93
TDP1-207ENST00000553617 WDR7Q9Y4E6 1490 aa2.96□□□□□ -1.93
TDP1-207ENST00000553617 NRCAMQ92823 1304 aa2.96□□□□□ -1.93
TDP1-207ENST00000553617 SRRM5B3KS81 715 aa2.96□□□□□ -1.94
TDP1-207ENST00000553617 DISC1C4P0D8 188 aa2.96□□□□□ -1.94
TDP1-207ENST00000553617 H7C0C1 242 aa2.96□□□□□ -1.94
TDP1-207ENST00000553617 GFYI3L273 518 aa2.96□□□□□ -1.94
TDP1-207ENST00000553617 K7EN84 100 aa2.96□□□□□ -1.94
TDP1-207ENST00000553617 ARPC5O15511 151 aa2.96□□□□□ -1.94
TDP1-207ENST00000553617 PHF1O43189 567 aaPredicted RBP2.96□□□□□ -1.94
TDP1-207ENST00000553617 KLRC4O43908 158 aa2.96□□□□□ -1.94
TDP1-207ENST00000553617 HPGDSO60760 199 aa2.96□□□□□ -1.94
TDP1-207ENST00000553617 AQP8O94778 261 aa2.96□□□□□ -1.94
TDP1-207ENST00000553617 DUSP14O95147 198 aaKnown RBP2.96□□□□□ -1.94
TDP1-207ENST00000553617 KRT75O95678 551 aa2.96□□□□□ -1.94
TDP1-207ENST00000553617 MMP1P03956 469 aa2.96□□□□□ -1.94
TDP1-207ENST00000553617 C2P06681 752 aa2.96□□□□□ -1.94
TDP1-207ENST00000553617 RHOCP08134 193 aa2.96□□□□□ -1.94
TDP1-207ENST00000553617 ADRB3P13945 408 aa2.96□□□□□ -1.94
TDP1-207ENST00000553617 GTF2F2P13984 249 aa2.96□□□□□ -1.94
TDP1-207ENST00000553617 MGMTP16455 207 aa2.96□□□□□ -1.94
TDP1-207ENST00000553617 ELK4P28324 431 aa2.96□□□□□ -1.94
TDP1-207ENST00000553617 GNRHRP30968 328 aa2.96□□□□□ -1.94
TDP1-207ENST00000553617 NUDT1P36639 197 aa2.96□□□□□ -1.94
TDP1-207ENST00000553617 SLCO1A2P46721 670 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms