RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-222	ENST00000553570	GNPDA2	Q8TDQ7	276 aa		4.05	□□□□□ -1.76
ATXN3-222	ENST00000553570	ACOT11	Q8WXI4	607 aa	Predicted RBP	4.05	□□□□□ -1.76
ATXN3-222	ENST00000553570	NEUROG1	Q92886	237 aa		4.05	□□□□□ -1.76
ATXN3-222	ENST00000553570	TMEM45B	Q96B21	275 aa		4.05	□□□□□ -1.76
ATXN3-222	ENST00000553570	FOXN4	Q96NZ1	517 aa		4.05	□□□□□ -1.76
ATXN3-222	ENST00000553570	ALKBH3	Q96Q83	286 aa	Predicted RBP	4.05	□□□□□ -1.76
ATXN3-222	ENST00000553570	RBP7	Q96R05	134 aa		4.05	□□□□□ -1.76
ATXN3-222	ENST00000553570	OR2M2	Q96R28	347 aa		4.05	□□□□□ -1.76
ATXN3-222	ENST00000553570	WAC	Q9BTA9	647 aa		4.05	□□□□□ -1.76
ATXN3-222	ENST00000553570	ULBP2	Q9BZM5	246 aa		4.05	□□□□□ -1.76
ATXN3-222	ENST00000553570	SLC19A3	Q9BZV2	496 aa		4.05	□□□□□ -1.76
ATXN3-222	ENST00000553570	TRIM15	Q9C019	465 aa		4.05	□□□□□ -1.76
ATXN3-222	ENST00000553570	POLR2J2	Q9GZM3	115 aa	Known RBP	4.05	□□□□□ -1.76
ATXN3-222	ENST00000553570	NDEL1	Q9GZM8	345 aa		4.05	□□□□□ -1.76
ATXN3-222	ENST00000553570	POLR2J3	Q9H1A7	115 aa	Known RBP	4.05	□□□□□ -1.76
ATXN3-222	ENST00000553570	PLK3	Q9H4B4	646 aa		4.05	□□□□□ -1.76
ATXN3-222	ENST00000553570	SLC17A5	Q9NRA2	495 aa		4.05	□□□□□ -1.76
ATXN3-222	ENST00000553570	NKIRAS2	Q9NYR9	191 aa		4.05	□□□□□ -1.76
ATXN3-222	ENST00000553570	ACTR3B	Q9P1U1	418 aa		4.05	□□□□□ -1.76
ATXN3-222	ENST00000553570	ZNF346	Q9UL40	294 aa	Known RBP	4.05	□□□□□ -1.76
ATXN3-222	ENST00000553570	PRPF19	Q9UMS4	504 aa	Known RBP	4.05	□□□□□ -1.76
ATXN3-222	ENST00000553570	AMDHD2	Q9Y303	409 aa		4.05	□□□□□ -1.76
ATXN3-222	ENST00000553570	RNF115	Q9Y4L5	304 aa		4.05	□□□□□ -1.76
ATXN3-222	ENST00000553570	IER3IP1	Q9Y5U9	82 aa		4.05	□□□□□ -1.76
ATXN3-222	ENST00000553570		U3KQV3	271 aa		4.05	□□□□□ -1.76
ATXN3-222	ENST00000553570	PLCE1	Q9P212	2302 aa		4.05	□□□□□ -1.76
ATXN3-222	ENST00000553570	SPEN	Q96T58	3664 aa	Known RBP	4.05	□□□□□ -1.76
ATXN3-222	ENST00000553570	DCHS2	Q6V1P9	2916 aa		4.05	□□□□□ -1.76
ATXN3-222	ENST00000553570	ASH1L	Q9NR48	2969 aa	Known RBP	4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	TRBV4-1	A0A0J9YWV2	114 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	DEFB108A	A8MXU0	73 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570		H7C1C5	153 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	TNFRSF13B	O14836	293 aa	Predicted RBP	4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	WNT9B	O14905	357 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	HSPA12A	O43301	675 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	SMPD2	O60906	423 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	E2F6	O75461	281 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	TRMU	O75648	421 aa	Known RBP	4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	CIB2	O75838	187 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	TPPP	O94811	219 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	CCNB2	O95067	398 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	FARS2	O95363	451 aa	Known RBP	4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	CST1	P01037	141 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	IGHG1	P01857	330 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	HLA-H	P01893	362 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	CRYAA	P02489	173 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	RAF1	P04049	648 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	ASAH2B	P0C7U1	165 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	SELL	P14151	372 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	B4GALT1	P15291	398 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	TMEM11	P17152	192 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	IFNGR2	P38484	337 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	RFX2	P48378	723 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	DAP3	P51398	398 aa	Known RBP	4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	IDH3G	P51553	393 aa	Predicted RBP	4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	P2RY4	P51582	365 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	RPL27	P61353	136 aa	Known RBP	4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	LCN6	P62502	163 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	GABPB1	Q06547	395 aa	Predicted RBP	4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	ZP4	Q12836	540 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	TRAP1	Q12931	704 aa	Known RBP	4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	FLOT2	Q14254	428 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	EFNB3	Q15768	340 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	ACKR1	Q16570	336 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	NCMAP	Q5T1S8	102 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	TMEM53	Q6P2H8	277 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	SMARCD3	Q6STE5	483 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	C20orf196	Q8IYI0	205 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	OFCC1	Q8IZS5	231 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	FBXL14	Q8N1E6	418 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	ARHGAP24	Q8N264	748 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	WDR31	Q8NA23	367 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	ICA1L	Q8NDH6	482 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	KBTBD8	Q8NFY9	601 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	OR4K5	Q8NGD3	323 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	OR6X1	Q8NH79	312 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	SLC7A13	Q8TCU3	470 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	BCL2L2	Q92843	193 aa	Predicted RBP	4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	MCHR2	Q969V1	340 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	FBXO17	Q96EF6	278 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	SAT2	Q96F10	170 aa	Predicted RBP	4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	SLC25A44	Q96H78	314 aa	Predicted RBP	4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	C7orf34	Q96L11	122 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	SAMD8	Q96LT4	415 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	MUS81	Q96NY9	551 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	ERMAP	Q96PL5	475 aa	Predicted RBP	4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	CCL19	Q99731	98 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	SH3GL3	Q99963	347 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	KATNB1	Q9BVA0	655 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	LINC00470	Q9BZP3	86 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	C1orf21	Q9H246	121 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	OR51B6	Q9H340	312 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	TXNIP	Q9H3M7	391 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	DENND2D	Q9H6A0	471 aa	Predicted RBP	4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	PPP1R3E	Q9H7J1	279 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	REEP1	Q9H902	201 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	CCNB1IP1	Q9NPC3	277 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	IL1RAP	Q9NPH3	570 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	GLTP	Q9NZD2	209 aa		4.04	□□□□□ -1.76
ATXN3-222	ENST00000553570	B3GAT1	Q9P2W7	334 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms