RNA–Protein interactions for RNA: ENST00000553555.5

APEX1-205, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 1 (best)

Gene APEX1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-205ENST00000553555 LCATP04180 440 aa11.93□□□□□ -0.5
APEX1-205ENST00000553555 SRMP19623 302 aa11.93□□□□□ -0.5
APEX1-205ENST00000553555 CCL1P22362 96 aa11.93□□□□□ -0.5
APEX1-205ENST00000553555 IL32P24001 234 aa11.93□□□□□ -0.5
APEX1-205ENST00000553555 MYL9P24844 172 aa11.93□□□□□ -0.5
APEX1-205ENST00000553555 APLNRP35414 380 aa11.93□□□□□ -0.5
APEX1-205ENST00000553555 SNAI3Q3KNW1 292 aa11.93□□□□□ -0.5
APEX1-205ENST00000553555 COLCA1Q6ZS62 124 aa11.93□□□□□ -0.5
APEX1-205ENST00000553555 TPRA1Q86W33 373 aa11.93□□□□□ -0.5
APEX1-205ENST00000553555 TMEM106AQ96A25 262 aa11.93□□□□□ -0.5
APEX1-205ENST00000553555 SGK3Q96BR1 496 aa11.93□□□□□ -0.5
APEX1-205ENST00000553555 ORAI1Q96D31 301 aa11.93□□□□□ -0.5
APEX1-205ENST00000553555 MS4A3Q96HJ5 214 aa11.93□□□□□ -0.5
APEX1-205ENST00000553555 KCNS3Q9BQ31 491 aa11.93□□□□□ -0.5
APEX1-205ENST00000553555 C1QTNF5Q9BXJ0 243 aa11.93□□□□□ -0.5
APEX1-205ENST00000553555 OR10A2Q9H208 303 aa11.93□□□□□ -0.5
APEX1-205ENST00000553555 TPK1Q9H3S4 243 aa11.93□□□□□ -0.5
APEX1-205ENST00000553555 GPR84Q9NQS5 396 aa11.93□□□□□ -0.5
APEX1-205ENST00000553555 CCDC59Q9P031 241 aaKnown RBP11.93□□□□□ -0.5
APEX1-205ENST00000553555 AMDHD2Q9Y303 409 aa11.93□□□□□ -0.5
APEX1-205ENST00000553555 PMF1-BGLAPU3KQ54 211 aa11.93□□□□□ -0.5
APEX1-205ENST00000553555 HIVEP3Q5T1R4 2406 aa11.93□□□□□ -0.5
APEX1-205ENST00000553555 AGFG2O95081 481 aa11.93□□□□□ -0.5
APEX1-205ENST00000553555 CCL2P13500 99 aa11.93□□□□□ -0.5
APEX1-205ENST00000553555 CCNOP22674 350 aa11.93□□□□□ -0.5
APEX1-205ENST00000553555 FAM27E3Q08E93 113 aa11.93□□□□□ -0.5
APEX1-205ENST00000553555 PLPP7Q8NBV4 271 aa11.93□□□□□ -0.5
APEX1-205ENST00000553555 OR13C3Q8NGS6 347 aa11.93□□□□□ -0.5
APEX1-205ENST00000553555 SLC25A46Q96AG3 418 aa11.93□□□□□ -0.5
APEX1-205ENST00000553555 LYZL4Q96KX0 146 aa11.93□□□□□ -0.5
APEX1-205ENST00000553555 SOX7Q9BT81 388 aa11.93□□□□□ -0.5
APEX1-205ENST00000553555 BARHL1Q9BZE3 327 aa11.93□□□□□ -0.5
APEX1-205ENST00000553555 SLIRPQ9GZT3 109 aaKnown RBP11.93□□□□□ -0.5
APEX1-205ENST00000553555 ZNF275Q9NSD4 429 aaPredicted RBP11.93□□□□□ -0.5
APEX1-205ENST00000553555 EPG5Q9HCE0 2579 aa11.92□□□□□ -0.5
APEX1-205ENST00000553555 ANKRD61A6NGH8 418 aa11.92□□□□□ -0.5
APEX1-205ENST00000553555 LMX1BO60663 402 aa11.92□□□□□ -0.5
APEX1-205ENST00000553555 IGKV3-15P01624 115 aa11.92□□□□□ -0.5
APEX1-205ENST00000553555 CD2P06729 351 aa11.92□□□□□ -0.5
APEX1-205ENST00000553555 SOX6P35712 828 aa11.92□□□□□ -0.5
APEX1-205ENST00000553555 RORCP51449 518 aa11.92□□□□□ -0.5
APEX1-205ENST00000553555 TIMM23BQ5SRD1 257 aa11.92□□□□□ -0.5
APEX1-205ENST00000553555 Q6ZSR3 168 aa11.92□□□□□ -0.5
APEX1-205ENST00000553555 DOK3Q7L591 496 aa11.92□□□□□ -0.5
APEX1-205ENST00000553555 SLC30A7Q8NEW0 376 aa11.92□□□□□ -0.5
APEX1-205ENST00000553555 STEAP2Q8NFT2 490 aa11.92□□□□□ -0.5
APEX1-205ENST00000553555 S100PBPQ96BU1 408 aa11.92□□□□□ -0.5
APEX1-205ENST00000553555 SLC25A15Q9Y619 301 aa11.92□□□□□ -0.5
APEX1-205ENST00000553555 KALRNO60229 2985 aa11.91□□□□□ -0.5
APEX1-205ENST00000553555 SMIM30A4D0T7 59 aa11.91□□□□□ -0.5
APEX1-205ENST00000553555 CELA3BP08861 270 aa11.91□□□□□ -0.5
APEX1-205ENST00000553555 ZNF12P17014 697 aa11.91□□□□□ -0.5
APEX1-205ENST00000553555 IDH3GP51553 393 aaPredicted RBP11.91□□□□□ -0.5
APEX1-205ENST00000553555 CAV3P56539 151 aa11.91□□□□□ -0.5
APEX1-205ENST00000553555 TBC1D28Q2M2D7 210 aa11.91□□□□□ -0.5
APEX1-205ENST00000553555 GFOD2Q3B7J2 385 aa11.91□□□□□ -0.5
APEX1-205ENST00000553555 CEP78Q5JTW2 689 aa11.91□□□□□ -0.5
APEX1-205ENST00000553555 C1QTNF12Q5T7M4 302 aa11.91□□□□□ -0.5
APEX1-205ENST00000553555 MYPOPQ86VE0 399 aaPredicted RBP11.91□□□□□ -0.5
APEX1-205ENST00000553555 COMMD2Q86X83 199 aa11.91□□□□□ -0.5
APEX1-205ENST00000553555 PAQR4Q8N4S7 273 aaPredicted RBP11.91□□□□□ -0.5
APEX1-205ENST00000553555 FAM169BQ8N8A8 192 aa11.91□□□□□ -0.5
APEX1-205ENST00000553555 CCDC54Q8NEL0 328 aa11.91□□□□□ -0.5
APEX1-205ENST00000553555 OR1J2Q8NGS2 313 aa11.91□□□□□ -0.5
APEX1-205ENST00000553555 OR14K1Q8NGZ2 314 aa11.91□□□□□ -0.5
APEX1-205ENST00000553555 FGGYQ96C11 551 aa11.91□□□□□ -0.5
APEX1-205ENST00000553555 FAM71F1Q96KD3 344 aaPredicted RBP11.91□□□□□ -0.5
APEX1-205ENST00000553555 C1QTNF6Q9BXI9 259 aa11.91□□□□□ -0.5
APEX1-205ENST00000553555 NXF2Q9GZY0 626 aaKnown RBP11.91□□□□□ -0.5
APEX1-205ENST00000553555 TCF7L1Q9HCS4 588 aa11.91□□□□□ -0.5
APEX1-205ENST00000553555 CRNNQ9UBG3 495 aaPredicted RBP11.91□□□□□ -0.5
APEX1-205ENST00000553555 TRAV8-7A0A075B6U6 113 aa11.9□□□□□ -0.5
APEX1-205ENST00000553555 XRCC2O43543 280 aa11.9□□□□□ -0.5
APEX1-205ENST00000553555 NCR1O76036 304 aa11.9□□□□□ -0.5
APEX1-205ENST00000553555 RAB3BP20337 219 aa11.9□□□□□ -0.5
APEX1-205ENST00000553555 ADORA2A-AS1P86434 159 aa11.9□□□□□ -0.5
APEX1-205ENST00000553555 HNRNPA0Q13151 305 aaKnown RBP11.9□□□□□ -0.5
APEX1-205ENST00000553555 ZNF404Q494X3 552 aa11.9□□□□□ -0.5
APEX1-205ENST00000553555 GLYATL3Q5SZD4 288 aa11.9□□□□□ -0.5
APEX1-205ENST00000553555 ASPHD2Q6ICH7 369 aa11.9□□□□□ -0.5
APEX1-205ENST00000553555 FJX1Q86VR8 437 aa11.9□□□□□ -0.5
APEX1-205ENST00000553555 NR2C2APQ86WQ0 139 aa11.9□□□□□ -0.5
APEX1-205ENST00000553555 PARP16Q8N5Y8 322 aa11.9□□□□□ -0.5
APEX1-205ENST00000553555 GALNT11Q8NCW6 608 aa11.9□□□□□ -0.5
APEX1-205ENST00000553555 OR2AE1Q8NHA4 323 aa11.9□□□□□ -0.5
APEX1-205ENST00000553555 APOBEC3DQ96AK3 386 aaPredicted RBP11.9□□□□□ -0.5
APEX1-205ENST00000553555 REEP6Q96HR9 211 aa11.9□□□□□ -0.5
APEX1-205ENST00000553555 USB1Q9BQ65 265 aaKnown RBP11.9□□□□□ -0.5
APEX1-205ENST00000553555 ACTR6Q9GZN1 396 aa11.9□□□□□ -0.5
APEX1-205ENST00000553555 SLITRK2Q9H156 845 aa11.9□□□□□ -0.5
APEX1-205ENST00000553555 RGCCQ9H4X1 137 aa11.9□□□□□ -0.5
APEX1-205ENST00000553555 PLEKHB1Q9UF11 243 aaPredicted RBP11.9□□□□□ -0.5
APEX1-205ENST00000553555 ZNF391Q9UJN7 358 aa11.9□□□□□ -0.5
APEX1-205ENST00000553555 FOXJ3Q9UPW0 622 aa11.9□□□□□ -0.5
APEX1-205ENST00000553555 A3GALT2U3KPV4 340 aa11.9□□□□□ -0.5
APEX1-205ENST00000553555 V9GYS6 101 aa11.9□□□□□ -0.5
APEX1-205ENST00000553555 A0A0G2JK05 382 aa11.89□□□□□ -0.51
APEX1-205ENST00000553555 LOC390937A0A1W2PQ73 354 aa11.89□□□□□ -0.51
APEX1-205ENST00000553555 C16orf97H3BN30 126 aa11.89□□□□□ -0.51
APEX1-205ENST00000553555 PDCD5O14737 125 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms