RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 FAM220BPB1ANY3 271 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 F5H5K5 113 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 NDUFB2O95178 105 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 PTBP3O95758 552 aaKnown RBP7.46□□□□□ -1.22
SYNE2-209ENST00000553308 IFNW1P05000 195 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 FBP1P09467 338 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 TGFBR2P37173 567 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 CDKN2AP42771 156 aaKnown RBP7.46□□□□□ -1.22
SYNE2-209ENST00000553308 FXYD6P3P58550 94 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 SELENOWP63302 87 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 ELF3P78545 371 aaPredicted RBP7.46□□□□□ -1.22
SYNE2-209ENST00000553308 KLRD1Q13241 179 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 HERPUD1Q15011 391 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 CDONQ4KMG0 1287 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 GPR139Q6DWJ6 353 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 SLC35E4Q6ICL7 350 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 Q6ZTK2 550 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 TMPRSS11FQ6ZWK6 438 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 MBOAT2Q6ZWT7 520 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 PGAP1Q75T13 922 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 MRPL21Q7Z2W9 205 aaKnown RBP7.46□□□□□ -1.22
SYNE2-209ENST00000553308 REC114Q7Z4M0 266 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 RNF113BQ8IZP6 322 aaKnown RBP7.46□□□□□ -1.22
SYNE2-209ENST00000553308 PNKDQ8N490 385 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 GCSAMQ8N6F7 178 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 SPRYD4Q8WW59 207 aaPredicted RBP7.46□□□□□ -1.22
SYNE2-209ENST00000553308 STON2Q8WXE9 905 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 FAM46AQ96IP4 442 aaKnown RBP7.46□□□□□ -1.22
SYNE2-209ENST00000553308 GPX7Q96SL4 187 aaPredicted RBP7.46□□□□□ -1.22
SYNE2-209ENST00000553308 SH3GL1Q99961 368 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 NDEL1Q9GZM8 345 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 PPA2Q9H2U2 334 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 CNTD2Q9H8S5 307 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 NRIP3Q9NQ35 241 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 SIRT7Q9NRC8 400 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 C1orf123Q9NWV4 160 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 ONECUT1Q9UBC0 465 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 DNAJB11Q9UBS4 358 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 FOXJ3Q9UPW0 622 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 SIGLEC7Q9Y286 467 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 IER3IP1Q9Y5U9 82 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 KPTNQ9Y664 436 aa7.46□□□□□ -1.22
SYNE2-209ENST00000553308 IGLV1-36A0A0B4J1U3 117 aa7.45□□□□□ -1.22
SYNE2-209ENST00000553308 hCG_1807616A0A1W2PRN6 198 aa7.45□□□□□ -1.22
SYNE2-209ENST00000553308 ANKRD61A6NGH8 418 aa7.45□□□□□ -1.22
SYNE2-209ENST00000553308 A6NLC8 198 aa7.45□□□□□ -1.22
SYNE2-209ENST00000553308 CD300LBA8K4G0 201 aa7.45□□□□□ -1.22
SYNE2-209ENST00000553308 RNASEK-C17orf49H0YIS7 233 aa7.45□□□□□ -1.22
SYNE2-209ENST00000553308 MRASO14807 208 aa7.45□□□□□ -1.22
SYNE2-209ENST00000553308 NPFFO15130 113 aa7.45□□□□□ -1.22
SYNE2-209ENST00000553308 GPR37O15354 613 aa7.45□□□□□ -1.22
SYNE2-209ENST00000553308 NDUFA2O43678 99 aa7.45□□□□□ -1.22
SYNE2-209ENST00000553308 ECDO95905 644 aaPredicted RBP7.45□□□□□ -1.22
SYNE2-209ENST00000553308 LCATP04180 440 aa7.45□□□□□ -1.22
SYNE2-209ENST00000553308 GRPP07492 148 aa7.45□□□□□ -1.22
SYNE2-209ENST00000553308 GABRA5P31644 462 aa7.45□□□□□ -1.22
SYNE2-209ENST00000553308 TRAP1Q12931 704 aaKnown RBP7.45□□□□□ -1.22
SYNE2-209ENST00000553308 MALLQ13021 153 aa7.45□□□□□ -1.22
SYNE2-209ENST00000553308 SNAI3Q3KNW1 292 aa7.45□□□□□ -1.22
SYNE2-209ENST00000553308 OXLD1Q5BKU9 147 aa7.45□□□□□ -1.22
SYNE2-209ENST00000553308 SLC18B1Q6NT16 456 aa7.45□□□□□ -1.22
SYNE2-209ENST00000553308 PGM2L1Q6PCE3 622 aa7.45□□□□□ -1.22
SYNE2-209ENST00000553308 METAP1DQ6UB28 335 aaPredicted RBP7.45□□□□□ -1.22
SYNE2-209ENST00000553308 C1orf122Q6ZSJ8 110 aa7.45□□□□□ -1.22
SYNE2-209ENST00000553308 ADCK1Q86TW2 530 aa7.45□□□□□ -1.22
SYNE2-209ENST00000553308 GALNT4Q8N4A0 578 aa7.45□□□□□ -1.22
SYNE2-209ENST00000553308 SLC26A10Q8NG04 563 aa7.45□□□□□ -1.22
SYNE2-209ENST00000553308 OR2T12Q8NG77 320 aa7.45□□□□□ -1.22
SYNE2-209ENST00000553308 OR2AE1Q8NHA4 323 aa7.45□□□□□ -1.22
SYNE2-209ENST00000553308 LZICQ8WZA0 190 aa7.45□□□□□ -1.22
SYNE2-209ENST00000553308 PITX2Q99697 317 aa7.45□□□□□ -1.22
SYNE2-209ENST00000553308 ATF6BQ99941 703 aa7.45□□□□□ -1.22
SYNE2-209ENST00000553308 SLC22A4Q9H015 551 aa7.45□□□□□ -1.22
SYNE2-209ENST00000553308 PNRC2Q9NPJ4 139 aaKnown RBP7.45□□□□□ -1.22
SYNE2-209ENST00000553308 TRIM36Q9NQ86 728 aa7.45□□□□□ -1.22
SYNE2-209ENST00000553308 ADA2Q9NZK5 511 aa7.45□□□□□ -1.22
SYNE2-209ENST00000553308 GMPR2Q9P2T1 348 aaKnown RBP7.45□□□□□ -1.22
SYNE2-209ENST00000553308 FBLN5Q9UBX5 448 aa7.45□□□□□ -1.22
SYNE2-209ENST00000553308 CAB39Q9Y376 341 aaPredicted RBP7.45□□□□□ -1.22
SYNE2-209ENST00000553308 GMDSO60547 372 aa7.44□□□□□ -1.22
SYNE2-209ENST00000553308 PTP4A3O75365 173 aa7.44□□□□□ -1.22
SYNE2-209ENST00000553308 PPP1R3DO95685 299 aa7.44□□□□□ -1.22
SYNE2-209ENST00000553308 CRABP1P29762 137 aa7.44□□□□□ -1.22
SYNE2-209ENST00000553308 SAA4P35542 130 aa7.44□□□□□ -1.22
SYNE2-209ENST00000553308 GGT2P36268 569 aa7.44□□□□□ -1.22
SYNE2-209ENST00000553308 MDH1P40925 334 aaKnown RBP7.44□□□□□ -1.22
SYNE2-209ENST00000553308 EFNB2P52799 333 aa7.44□□□□□ -1.22
SYNE2-209ENST00000553308 LOXL3P58215 753 aa7.44□□□□□ -1.22
SYNE2-209ENST00000553308 ZNF92Q03936 586 aa7.44□□□□□ -1.22
SYNE2-209ENST00000553308 PCK2Q16822 640 aa7.44□□□□□ -1.22
SYNE2-209ENST00000553308 AGBL2Q5U5Z8 902 aa7.44□□□□□ -1.22
SYNE2-209ENST00000553308 TEX36Q5VZQ5 186 aa7.44□□□□□ -1.22
SYNE2-209ENST00000553308 DNM1P34Q6PK57 102 aa7.44□□□□□ -1.22
SYNE2-209ENST00000553308 OR6V1Q8N148 313 aa7.44□□□□□ -1.22
SYNE2-209ENST00000553308 LYG1Q8N1E2 194 aa7.44□□□□□ -1.22
SYNE2-209ENST00000553308 LNX2Q8N448 690 aa7.44□□□□□ -1.22
SYNE2-209ENST00000553308 FAM216BQ8N7L0 139 aa7.44□□□□□ -1.22
SYNE2-209ENST00000553308 Q8N7P7 452 aa7.44□□□□□ -1.22
SYNE2-209ENST00000553308 PLPP7Q8NBV4 271 aa7.44□□□□□ -1.22
SYNE2-209ENST00000553308 LY6G5BQ8NDX9 201 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms