RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 C2orf54Q08AI8 447 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 ZP4Q12836 540 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 SRSF9Q13242 221 aaKnown RBP eCLIP1.93□□□□□ -2.1
CPSF6-207ENST00000551516 NAB1Q13506 487 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 DDX39BQ13838 428 aaKnown RBP1.93□□□□□ -2.1
CPSF6-207ENST00000551516 CEACAM7Q14002 265 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 EXOC3L2Q2M3D2 409 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 LRRC37A5PQ49AS3 106 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 FAM106AQ4KMX7 169 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 LGSNQ5TDP6 509 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 RAET1LQ5VY80 246 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 RUSC1-AS1Q66K80 236 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 HIST2H2AA3Q6FI13 130 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 ANKRD26P1Q6NSI1 321 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 NOXRED1Q6NXP6 359 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 ZCCHC12Q6PEW1 402 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 SCIMPQ6UWF3 145 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 TMEM107Q6UX40 140 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 WDR88Q6ZMY6 472 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 FRRS1Q6ZNA5 592 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 MTERF4Q7Z6M4 381 aaKnown RBP1.93□□□□□ -2.1
CPSF6-207ENST00000551516 LRP11Q86VZ4 500 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 TMEM123Q8N131 208 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 SLC43A2Q8N370 569 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 C17orf78Q8N4C9 275 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF614Q8N883 585 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 BANPQ8N9N5 519 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 CDRT4Q8N9R6 151 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 DEFB108BQ8NET1 73 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 OR13C5Q8NGS8 318 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 OR5W2Q8NH69 310 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 CLDND2Q8NHS1 167 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 ZFP90Q8TF47 636 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 ZNRF4Q8WWF5 429 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 TMEM190Q8WZ59 177 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 FAM46BQ96A09 425 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 EXOSC8Q96B26 276 aaKnown RBP1.93□□□□□ -2.1
CPSF6-207ENST00000551516 BPIFA2Q96DR5 249 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 SLC41A3Q96GZ6 507 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 DUX3Q96PT4 197 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 NEDD4LQ96PU5 975 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 KRT12Q99456 494 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 STACQ99469 402 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 CITED1Q99966 193 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 MRPL57Q9BQC6 102 aaKnown RBP1.93□□□□□ -2.1
CPSF6-207ENST00000551516 WFDC6Q9BQY6 131 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 BEX2Q9BXY8 128 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 C20orf27Q9GZN8 174 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 TSPYL1Q9H0U9 437 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 PIGUQ9H490 435 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 TMEM185BQ9H7F4 350 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF442Q9H7R0 627 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 MARCH7Q9H992 704 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 SDF2L1Q9HCN8 221 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 FANCFQ9NPI8 374 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 UBQLN4Q9NRR5 601 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 ZCCHC3Q9NUD5 404 aaKnown RBP1.93□□□□□ -2.1
CPSF6-207ENST00000551516 ACER3Q9NUN7 267 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 TAS2R9Q9NYW1 312 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 NINJ2Q9NZG7 142 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 UBQLN2Q9UHD9 624 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 BCAP29Q9UHQ4 241 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 ZNF580Q9UK33 172 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 TRAPPC4Q9Y296 219 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 TMED7Q9Y3B3 224 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 STRAPQ9Y3F4 350 aaKnown RBP1.93□□□□□ -2.1
CPSF6-207ENST00000551516 TIMM22Q9Y584 194 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 MMP24Q9Y5R2 645 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 DNAJC15Q9Y5T4 150 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 GMEB1Q9Y692 573 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 KIAA1109Q2LD37 5005 aa1.93□□□□□ -2.1
CPSF6-207ENST00000551516 PPIAL4EA0A075B759 164 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 A0A087WZ39 114 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 NPIPA5A0A0B4J1W7 369 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 PPIAL4CA0A0B4J2A2 164 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 IGHV2OR16-5A0A0B4J2B6 119 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 RNF103-CHMP3A0A140T963 221 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 hCG_38984A0A1B0GV85 526 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 A0A1W2PP18 115 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 TMEM72A0PK05 275 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 IFITM10A6NMD0 228 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 SYCE1LA8MT33 242 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 SUPT3HB4E1H0 165 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 NPIPA7E9PJI5 369 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 PPIAL4DF5H284 164 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 TRAPPC2LH3BP13 241 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 KIF2AO00139 706 aaPredicted RBP1.92□□□□□ -2.1
CPSF6-207ENST00000551516 NR5A2O00482 541 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 TCF21O43680 179 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 KIAA0513O60268 411 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 PLIN3O60664 434 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 SUPT3HO75486 399 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 KHDRBS3O75525 346 aaKnown RBP1.92□□□□□ -2.1
CPSF6-207ENST00000551516 UPK3AO75631 287 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 OTCP00480 354 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 IGHV3-9P01782 118 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 THY1P04216 161 aa1.92□□□□□ -2.1
CPSF6-207ENST00000551516 HMGN2P05204 90 aaKnown RBP1.92□□□□□ -2.1
CPSF6-207ENST00000551516 PTMAP06454 111 aaKnown RBP1.92□□□□□ -2.1
CPSF6-207ENST00000551516 ABHD2P08910 425 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms