RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 SYNGR3O43761 229 aa10.09□□□□□ -0.79
RAB5C-208ENST00000551338 DHFRP00374 187 aa10.09□□□□□ -0.79
RAB5C-208ENST00000551338 DBHP09172 617 aa10.09□□□□□ -0.79
RAB5C-208ENST00000551338 H2AFB2P0C5Z0 115 aa10.09□□□□□ -0.79
RAB5C-208ENST00000551338 GSTT2BP0CG30 244 aa10.09□□□□□ -0.79
RAB5C-208ENST00000551338 LIPCP11150 499 aa10.09□□□□□ -0.79
RAB5C-208ENST00000551338 B4GALT1P15291 398 aa10.09□□□□□ -0.79
RAB5C-208ENST00000551338 ZNF32P17041 273 aa10.09□□□□□ -0.79
RAB5C-208ENST00000551338 CAPZA1P52907 286 aa10.09□□□□□ -0.79
RAB5C-208ENST00000551338 RRADP55042 308 aa10.09□□□□□ -0.79
RAB5C-208ENST00000551338 RAG2P55895 527 aa10.09□□□□□ -0.79
RAB5C-208ENST00000551338 QRFPP83859 136 aa10.09□□□□□ -0.79
RAB5C-208ENST00000551338 HGFACQ04756 655 aa10.09□□□□□ -0.79
RAB5C-208ENST00000551338 SRYQ05066 204 aa10.09□□□□□ -0.79
RAB5C-208ENST00000551338 UNC119Q13432 240 aa10.09□□□□□ -0.79
RAB5C-208ENST00000551338 GFOD2Q3B7J2 385 aa10.09□□□□□ -0.79
RAB5C-208ENST00000551338 RIPPLY2Q5TAB7 128 aa10.09□□□□□ -0.79
RAB5C-208ENST00000551338 TSPO2Q5TGU0 170 aa10.09□□□□□ -0.79
RAB5C-208ENST00000551338 IGF2-ASQ6U949 168 aa10.09□□□□□ -0.79
RAB5C-208ENST00000551338 PLXDC2Q6UX71 529 aa10.09□□□□□ -0.79
RAB5C-208ENST00000551338 PGAP1Q75T13 922 aa10.09□□□□□ -0.79
RAB5C-208ENST00000551338 MEIOBQ8N635 442 aa10.09□□□□□ -0.79
RAB5C-208ENST00000551338 ZFP62Q8NB50 900 aaPredicted RBP10.09□□□□□ -0.79
RAB5C-208ENST00000551338 OR5D14Q8NGL3 314 aa10.09□□□□□ -0.79
RAB5C-208ENST00000551338 GPX8Q8TED1 209 aa10.09□□□□□ -0.79
RAB5C-208ENST00000551338 SSC4DQ8WTU2 575 aa10.09□□□□□ -0.79
RAB5C-208ENST00000551338 AKAP1Q92667 903 aaKnown RBP eCLIP10.09□□□□□ -0.79
RAB5C-208ENST00000551338 RNF170Q96K19 258 aa10.09□□□□□ -0.79
RAB5C-208ENST00000551338 UQCC2Q9BRT2 126 aa10.09□□□□□ -0.79
RAB5C-208ENST00000551338 BEX2Q9BXY8 128 aa10.09□□□□□ -0.79
RAB5C-208ENST00000551338 LINC00470Q9BZP3 86 aa10.09□□□□□ -0.79
RAB5C-208ENST00000551338 C20orf85Q9H1P6 137 aa10.09□□□□□ -0.79
RAB5C-208ENST00000551338 GHITMQ9H3K2 345 aa10.09□□□□□ -0.79
RAB5C-208ENST00000551338 ZNF552Q9H707 407 aaPredicted RBP10.09□□□□□ -0.79
RAB5C-208ENST00000551338 MYEF2Q9P2K5 600 aaKnown RBP10.09□□□□□ -0.79
RAB5C-208ENST00000551338 CNTRLQ7Z7A1 2325 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 A0A0A6YYH2 397 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 A6NJ64 397 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 A6NL46 340 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 KLRC4-KLRK1H3BQV0 150 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 NKX2-8O15522 239 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 SGCEO43556 437 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 SYNGR4O95473 234 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 BPNT1O95861 308 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 VSIG8P0DPA2 414 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 PRF1P14222 555 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 CD46P15529 392 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 WT1P19544 449 aaPredicted RBP10.08□□□□□ -0.8
RAB5C-208ENST00000551338 PRSS3P35030 304 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 THBS4P35443 961 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 SLC6A9P48067 706 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 CD83Q01151 205 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 SCRN3Q0VDG4 424 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 PMPCAQ10713 525 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 KRTAP27-1Q3LI81 207 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 LINC00303Q3SY05 128 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 MOGAT2Q3SYC2 334 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 SFRP5Q5T4F7 317 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 SFRP4Q6FHJ7 346 aaPredicted RBP10.08□□□□□ -0.8
RAB5C-208ENST00000551338 ZNF774Q6NX45 483 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 FAAP20Q6NZ36 180 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 CRIP3Q6Q6R5 217 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.08□□□□□ -0.8
RAB5C-208ENST00000551338 MED12LQ86YW9 2145 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 TCTE3Q8IZS6 198 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 FAM109AQ8N4B1 249 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 PAQR4Q8N4S7 273 aaPredicted RBP10.08□□□□□ -0.8
RAB5C-208ENST00000551338 OR56B4Q8NH76 319 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 FGFBP3Q8TAT2 258 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 PHF21AQ96BD5 680 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 ZNF486Q96H40 463 aaPredicted RBP10.08□□□□□ -0.8
RAB5C-208ENST00000551338 C1orf147Q96MC9 270 aaPredicted RBP10.08□□□□□ -0.8
RAB5C-208ENST00000551338 GAL3ST1Q99999 423 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 WNT5BQ9H1J7 359 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 SLCO5A1Q9H2Y9 848 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 MCUBQ9NWR8 336 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 PAQR5Q9NXK6 330 aaPredicted RBP10.08□□□□□ -0.8
RAB5C-208ENST00000551338 RAB22AQ9UL26 194 aa10.08□□□□□ -0.8
RAB5C-208ENST00000551338 NOSIPQ9Y314 301 aaKnown RBP10.08□□□□□ -0.8
RAB5C-208ENST00000551338 IGKV1-9A0A0C4DH69 117 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 MEIS3P1A6NDR6 274 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 OR6C6A6NF89 314 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 TMEM14DPA8MWL7 114 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 SULT1C2O00338 296 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 RBBP9O75884 186 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 DHRS3O75911 302 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 APOC1P02654 83 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 ERCC1P07992 297 aaPredicted RBP10.07□□□□□ -0.8
RAB5C-208ENST00000551338 CSF1P09603 554 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 ZNF93P35789 620 aaPredicted RBP10.07□□□□□ -0.8
RAB5C-208ENST00000551338 PPIAP62937 165 aaKnown RBP10.07□□□□□ -0.8
RAB5C-208ENST00000551338 SSBP1Q04837 148 aaKnown RBP10.07□□□□□ -0.8
RAB5C-208ENST00000551338 FCN2Q15485 313 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 BCL2A1Q16548 175 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 C3AR1Q16581 482 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 ST3GAL2Q16842 350 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 RSPO4Q2I0M5 234 aaPredicted RBP10.07□□□□□ -0.8
RAB5C-208ENST00000551338 GSG1Q2KHT4 349 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 SNAI3Q3KNW1 292 aa10.07□□□□□ -0.8
RAB5C-208ENST00000551338 ZFP69Q49AA0 526 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms