RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 ATP5J2P56134 94 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 ZNF121P58317 390 aaPredicted RBP1.97□□□□□ -2.09
CCDC38-208ENST00000549876 XRCC4Q13426 336 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 SLC39A6Q13433 755 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 TFDP2Q14188 446 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 PRPSAP1Q14558 356 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 QPRTQ15274 297 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 ZBED5Q49AG3 693 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 CLEC6AQ6EIG7 209 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 ZNF621Q6ZSS3 439 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 OAFQ86UD1 273 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 UNC93AQ86WB7 457 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 HORMAD1Q86X24 394 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 SYS1Q8N2H4 156 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 MREGQ8N565 214 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 CYB561D1Q8N8Q1 229 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 MNS1Q8NEH6 495 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 OR52E2Q8NGJ4 325 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 OR6K6Q8NGW6 343 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 OR6N2Q8NGY6 317 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 OR10J6PQ8NGY7 276 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 UBALD1Q8TB05 177 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 MCOLN3Q8TDD5 553 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 APH1BQ8WW43 257 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 TFGQ92734 400 aaPredicted RBP1.97□□□□□ -2.09
CCDC38-208ENST00000549876 FAM3DQ96BQ1 224 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 AURKBQ96GD4 344 aaPredicted RBP1.97□□□□□ -2.09
CCDC38-208ENST00000549876 ACBD6Q9BR61 282 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 AGMATQ9BSE5 352 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 HINT2Q9BX68 163 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 GABARAPL3Q9BY60 117 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 PRRG3Q9BZD7 231 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 SYT4Q9H2B2 425 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 UBE2ZQ9H832 354 aaPredicted RBP1.97□□□□□ -2.09
CCDC38-208ENST00000549876 SPACA1Q9HBV2 294 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 STMN3Q9NZ72 180 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 CTSFQ9UBX1 484 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 ZNF629Q9UEG4 869 aaPredicted RBP1.97□□□□□ -2.09
CCDC38-208ENST00000549876 NOSIPQ9Y314 301 aaKnown RBP1.97□□□□□ -2.09
CCDC38-208ENST00000549876 SBNO1A3KN83 1393 aa1.97□□□□□ -2.09
CCDC38-208ENST00000549876 COLCA2A8K830 154 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 HACD1B0YJ81 288 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 NME4O00746 187 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 PRMT5O14744 637 aaPredicted RBP1.96□□□□□ -2.1
CCDC38-208ENST00000549876 ZMPSTE24O75844 475 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 CATP04040 527 aaKnown RBP1.96□□□□□ -2.1
CCDC38-208ENST00000549876 GIPP09681 153 aaPredicted RBP1.96□□□□□ -2.1
CCDC38-208ENST00000549876 OR5H8P0DN80 308 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 GGT1P19440 569 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 CELP19835 753 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 RAB3BP20337 219 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 USF1P22415 310 aaPredicted RBP1.96□□□□□ -2.1
CCDC38-208ENST00000549876 WARSP23381 471 aaKnown RBP1.96□□□□□ -2.1
CCDC38-208ENST00000549876 HTR2CP28335 458 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 DEKP35659 375 aaKnown RBP1.96□□□□□ -2.1
CCDC38-208ENST00000549876 MAP3K7CLP57077 242 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 TCP10Q12799 353 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 PON3Q15166 354 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 ATP6V1FQ16864 119 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 RFX4Q33E94 735 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 CHRFAM7AQ494W8 412 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 PTPN20Q4JDL3 420 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 THEM4Q5T1C6 240 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 PDPK2PQ6A1A2 396 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 FRMPD2BQ6IN97 320 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 ERICH5Q6P6B1 374 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 Q6ZR03 302 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 LINC00173Q6ZV60 143 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 ABHD13Q7L211 337 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 NDUFAF7Q7L592 441 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 SPATA24Q86W54 205 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 NPWQ8N729 165 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 SNX31Q8N9S9 440 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 OR6Q1Q8NGQ2 317 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 OR4S2Q8NH73 311 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 OR8D1Q8WZ84 308 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 CCDC124Q96CT7 223 aaKnown RBP1.96□□□□□ -2.1
CCDC38-208ENST00000549876 LRRC58Q96CX6 371 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 RCN3Q96D15 328 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 NRBF2Q96F24 287 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 GALNT14Q96FL9 552 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 CENPNQ96H22 339 aaPredicted RBP1.96□□□□□ -2.1
CCDC38-208ENST00000549876 NAPGQ99747 312 aaPredicted RBP1.96□□□□□ -2.1
CCDC38-208ENST00000549876 ANKHQ9HCJ1 492 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 VCX3AQ9NNX9 186 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 MARCOQ9UEW3 520 aaPredicted RBP1.96□□□□□ -2.1
CCDC38-208ENST00000549876 CD300AQ9UGN4 299 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 ZNF229Q9UJW7 825 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 WDR62O43379 1518 aa1.96□□□□□ -2.1
CCDC38-208ENST00000549876 FHOD3Q2V2M9 1422 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 IGLV2-18A0A075B6J9 118 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 A0A0A6YYD5 115 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 IGLV1-36A0A0B4J1U3 117 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 GOLGA8QA0A0J9YX86 632 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 ANKRD65E5RJM6 399 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 GATCO43716 136 aaKnown RBP1.95□□□□□ -2.1
CCDC38-208ENST00000549876 SMC2O95347 1197 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 CST4P01036 141 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 BGLAPP02818 100 aa1.95□□□□□ -2.1
CCDC38-208ENST00000549876 RHOCP08134 193 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms