RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 DBHP09172 617 aa11.74□□□□□ -0.53
PTCH1-217ENST00000548420 NAT2P11245 290 aa11.74□□□□□ -0.53
PTCH1-217ENST00000548420 OSMP13725 252 aa11.74□□□□□ -0.53
PTCH1-217ENST00000548420 ACHEP22303 614 aa11.74□□□□□ -0.53
PTCH1-217ENST00000548420 PYCR1P32322 319 aa11.74□□□□□ -0.53
PTCH1-217ENST00000548420 GRK5P34947 590 aa11.74□□□□□ -0.53
PTCH1-217ENST00000548420 CENPAP49450 140 aa11.74□□□□□ -0.53
PTCH1-217ENST00000548420 ERFP50548 548 aa11.74□□□□□ -0.53
PTCH1-217ENST00000548420 ARHGDIAP52565 204 aa11.74□□□□□ -0.53
PTCH1-217ENST00000548420 TEX30Q5JUR7 227 aa11.74□□□□□ -0.53
PTCH1-217ENST00000548420 SPATA46Q5T0L3 261 aa11.74□□□□□ -0.53
PTCH1-217ENST00000548420 FAHD1Q6P587 224 aa11.74□□□□□ -0.53
PTCH1-217ENST00000548420 CORO6Q6QEF8 472 aa11.74□□□□□ -0.53
PTCH1-217ENST00000548420 COLCA1Q6ZS62 124 aa11.74□□□□□ -0.53
PTCH1-217ENST00000548420 IPCEF1Q8WWN9 437 aaPredicted RBP11.74□□□□□ -0.53
PTCH1-217ENST00000548420 PTP4A1Q93096 173 aa11.74□□□□□ -0.53
PTCH1-217ENST00000548420 HDHD2Q9H0R4 259 aa11.74□□□□□ -0.53
PTCH1-217ENST00000548420 FN3KRPQ9HA64 309 aa11.74□□□□□ -0.53
PTCH1-217ENST00000548420 TCF7L1Q9HCS4 588 aa11.74□□□□□ -0.53
PTCH1-217ENST00000548420 LYSTQ99698 3801 aa11.74□□□□□ -0.53
PTCH1-217ENST00000548420 MDFIC2A0A1B0GVS7 189 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 A0A1W2PPW3 197 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 E2F6O75461 281 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 NCR1O76036 304 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 IFNGP01579 166 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 OPN1MWP04001 364 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 OPN1MW2P0DN77 364 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 OPN1MW3P0DN78 364 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 SPI1P17947 270 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 LIPAP38571 399 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 RGS6P49758 472 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 TMEM33P57088 247 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 PROK1P58294 105 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 ECH1Q13011 328 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 PSG7Q13046 419 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 ATP6AP1Q15904 470 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 NKPD1Q17RQ9 610 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 PCGF3Q3KNV8 242 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 LINC01590Q5TEZ4 76 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 CFAP77Q6ZQR2 320 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 ICA1LQ8NDH6 482 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 DEFB108BQ8NET1 73 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 PROKR2Q8NFJ6 384 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 OR5K1Q8NHB7 308 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 TEX47Q8TBZ9 253 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 DNAJC9Q8WXX5 260 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 RDH5Q92781 318 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 HAVCR1Q96D42 359 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 MAP6Q96JE9 813 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 COG8Q96MW5 612 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 POFUT1Q9H488 388 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 POLR1DQ9Y2S0 133 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 RNF114Q9Y508 228 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 AP4S1Q9Y587 144 aa11.73□□□□□ -0.53
PTCH1-217ENST00000548420 H3BN98 237 aa11.72□□□□□ -0.53
PTCH1-217ENST00000548420 HLA-DQA2P01906 255 aa11.72□□□□□ -0.53
PTCH1-217ENST00000548420 CLUP10909 449 aa11.72□□□□□ -0.53
PTCH1-217ENST00000548420 PSKH1P11801 424 aa11.72□□□□□ -0.53
PTCH1-217ENST00000548420 KITLGP21583 273 aa11.72□□□□□ -0.53
PTCH1-217ENST00000548420 FMO3P31513 532 aa11.72□□□□□ -0.53
PTCH1-217ENST00000548420 OTX1P32242 354 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-217ENST00000548420 MAGEB1P43366 347 aa11.72□□□□□ -0.53
PTCH1-217ENST00000548420 DAPP51397 102 aa11.72□□□□□ -0.53
PTCH1-217ENST00000548420 GINS1Q14691 196 aa11.72□□□□□ -0.53
PTCH1-217ENST00000548420 ALKBH6Q3KRA9 238 aa11.72□□□□□ -0.53
PTCH1-217ENST00000548420 AVPI1Q5T686 147 aa11.72□□□□□ -0.53
PTCH1-217ENST00000548420 C1orf146Q5VVC0 180 aa11.72□□□□□ -0.53
PTCH1-217ENST00000548420 SLC27A4Q6P1M0 643 aa11.72□□□□□ -0.53
PTCH1-217ENST00000548420 LYPD4Q6UWN0 246 aa11.72□□□□□ -0.53
PTCH1-217ENST00000548420 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-217ENST00000548420 LINC00346Q8IVM7 164 aa11.72□□□□□ -0.53
PTCH1-217ENST00000548420 PARP8Q8N3A8 854 aa11.72□□□□□ -0.53
PTCH1-217ENST00000548420 IQCF1Q8N6M8 205 aa11.72□□□□□ -0.53
PTCH1-217ENST00000548420 OR51L1Q8NGJ5 315 aa11.72□□□□□ -0.53
PTCH1-217ENST00000548420 OR10S1Q8NGN2 331 aa11.72□□□□□ -0.53
PTCH1-217ENST00000548420 OR9Q1Q8NGQ5 310 aa11.72□□□□□ -0.53
PTCH1-217ENST00000548420 CDADC1Q9BWV3 514 aa11.72□□□□□ -0.53
PTCH1-217ENST00000548420 HCAR1Q9BXC0 346 aa11.72□□□□□ -0.53
PTCH1-217ENST00000548420 WDR76Q9H967 626 aa11.72□□□□□ -0.53
PTCH1-217ENST00000548420 MARCH7Q9H992 704 aa11.72□□□□□ -0.53
PTCH1-217ENST00000548420 ZNF556Q9HAH1 456 aa11.72□□□□□ -0.53
PTCH1-217ENST00000548420 CYSLTR2Q9NS75 346 aa11.72□□□□□ -0.53
PTCH1-217ENST00000548420 CGGBP1Q9UFW8 167 aaPredicted RBP11.72□□□□□ -0.53
PTCH1-217ENST00000548420 COMMD3-BMI1R4GMX3 469 aa11.72□□□□□ -0.53
PTCH1-217ENST00000548420 TVP23AA6NH52 213 aa11.71□□□□□ -0.53
PTCH1-217ENST00000548420 RIIAD1A6NNX1 92 aa11.71□□□□□ -0.53
PTCH1-217ENST00000548420 K7EIL1 84 aa11.71□□□□□ -0.53
PTCH1-217ENST00000548420 SURF4O15260 269 aa11.71□□□□□ -0.53
PTCH1-217ENST00000548420 HOXA3O43365 443 aaPredicted RBP11.71□□□□□ -0.53
PTCH1-217ENST00000548420 MPIG6BO95866 241 aa11.71□□□□□ -0.53
PTCH1-217ENST00000548420 IGHV2-5P01817 119 aa11.71□□□□□ -0.53
PTCH1-217ENST00000548420 HMGN1P05114 100 aa11.71□□□□□ -0.53
PTCH1-217ENST00000548420 GYPBP06028 91 aa11.71□□□□□ -0.53
PTCH1-217ENST00000548420 CSF1P09603 554 aa11.71□□□□□ -0.53
PTCH1-217ENST00000548420 ACSM4P0C7M7 580 aa11.71□□□□□ -0.53
PTCH1-217ENST00000548420 RAC2P15153 192 aa11.71□□□□□ -0.53
PTCH1-217ENST00000548420 ZNF823P16415 610 aa11.71□□□□□ -0.53
PTCH1-217ENST00000548420 ZNF3P17036 446 aa11.71□□□□□ -0.53
PTCH1-217ENST00000548420 GATA3P23771 443 aa11.71□□□□□ -0.53
PTCH1-217ENST00000548420 ZNF81P51508 661 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms