RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 ACTR3CQ9C0K3 210 aaPredicted RBP2.01□□□□□ -2.09
DEPDC4-205ENST00000548313 ZSCAN16Q9H4T2 348 aaPredicted RBP2.01□□□□□ -2.09
DEPDC4-205ENST00000548313 TMEM185BQ9H7F4 350 aa2.01□□□□□ -2.09
DEPDC4-205ENST00000548313 MRM3Q9HC36 420 aaKnown RBP2.01□□□□□ -2.09
DEPDC4-205ENST00000548313 ZNF160Q9HCG1 818 aa2.01□□□□□ -2.09
DEPDC4-205ENST00000548313 NMRK1Q9NWW6 199 aa2.01□□□□□ -2.09
DEPDC4-205ENST00000548313 SLC39A1Q9NY26 324 aa2.01□□□□□ -2.09
DEPDC4-205ENST00000548313 HMCN1Q96RW7 5635 aa2.01□□□□□ -2.09
DEPDC4-205ENST00000548313 SHROOM3Q8TF72 1996 aa2□□□□□ -2.09
DEPDC4-205ENST00000548313 TICRRQ7Z2Z1 1910 aa2□□□□□ -2.09
DEPDC4-205ENST00000548313 SMIM26A0A096LP01 95 aa2□□□□□ -2.09
DEPDC4-205ENST00000548313 H7C1H1 209 aa2□□□□□ -2.09
DEPDC4-205ENST00000548313 HBE1P02100 147 aa2□□□□□ -2.09
DEPDC4-205ENST00000548313 MYL9P24844 172 aa2□□□□□ -2.09
DEPDC4-205ENST00000548313 CD34P28906 385 aa2□□□□□ -2.09
DEPDC4-205ENST00000548313 TNFSF9P41273 254 aa2□□□□□ -2.09
DEPDC4-205ENST00000548313 CCNG1P51959 295 aa2□□□□□ -2.09
DEPDC4-205ENST00000548313 UBE2E1P51965 193 aa2□□□□□ -2.09
DEPDC4-205ENST00000548313 LRRC74AQ0VAA2 488 aa2□□□□□ -2.09
DEPDC4-205ENST00000548313 RBMY1FQ15415 496 aaKnown RBP2□□□□□ -2.09
DEPDC4-205ENST00000548313 METAP1DQ6UB28 335 aaPredicted RBP2□□□□□ -2.09
DEPDC4-205ENST00000548313 ZNF101Q8IZC7 436 aa2□□□□□ -2.09
DEPDC4-205ENST00000548313 UBAC2Q8NBM4 344 aa2□□□□□ -2.09
DEPDC4-205ENST00000548313 FAM81AQ8TBF8 368 aa2□□□□□ -2.09
DEPDC4-205ENST00000548313 ZNF317Q96PQ6 595 aaPredicted RBP2□□□□□ -2.09
DEPDC4-205ENST00000548313 TMEM243Q9BU79 118 aa2□□□□□ -2.09
DEPDC4-205ENST00000548313 SLIRPQ9GZT3 109 aaKnown RBP2□□□□□ -2.09
DEPDC4-205ENST00000548313 TMEM38AQ9H6F2 299 aa2□□□□□ -2.09
DEPDC4-205ENST00000548313 RETNQ9HD89 108 aa2□□□□□ -2.09
DEPDC4-205ENST00000548313 CLN6Q9NWW5 311 aa2□□□□□ -2.09
DEPDC4-205ENST00000548313 PCDH11XQ9BZA7 1347 aa1.99□□□□□ -2.09
DEPDC4-205ENST00000548313 IGKV2-24A0A0C4DH68 120 aa1.99□□□□□ -2.09
DEPDC4-205ENST00000548313 M0R3G1 203 aa1.99□□□□□ -2.09
DEPDC4-205ENST00000548313 CCNB2O95067 398 aa1.99□□□□□ -2.09
DEPDC4-205ENST00000548313 LHBP01229 141 aa1.99□□□□□ -2.09
DEPDC4-205ENST00000548313 CSNK2A2P19784 350 aaPredicted RBP1.99□□□□□ -2.09
DEPDC4-205ENST00000548313 RAB4AP20338 218 aa1.99□□□□□ -2.09
DEPDC4-205ENST00000548313 PFN2P35080 140 aa1.99□□□□□ -2.09
DEPDC4-205ENST00000548313 PCK1P35558 622 aa1.99□□□□□ -2.09
DEPDC4-205ENST00000548313 POLR2IP36954 125 aaKnown RBP1.99□□□□□ -2.09
DEPDC4-205ENST00000548313 GDI2P50395 445 aaKnown RBP1.99□□□□□ -2.09
DEPDC4-205ENST00000548313 CYP24A1Q07973 514 aa1.99□□□□□ -2.09
DEPDC4-205ENST00000548313 SPANXN2Q5MJ10 180 aa1.99□□□□□ -2.09
DEPDC4-205ENST00000548313 CCDC183Q5T5S1 534 aa1.99□□□□□ -2.09
DEPDC4-205ENST00000548313 BRD3OSQ6XYD6 125 aa1.99□□□□□ -2.09
DEPDC4-205ENST00000548313 MDP1Q86V88 176 aa1.99□□□□□ -2.09
DEPDC4-205ENST00000548313 ERO1BQ86YB8 467 aa1.99□□□□□ -2.09
DEPDC4-205ENST00000548313 TMEM104Q8NE00 496 aa1.99□□□□□ -2.09
DEPDC4-205ENST00000548313 C19orf18Q8NEA5 215 aa1.99□□□□□ -2.09
DEPDC4-205ENST00000548313 OR1P1Q8NH06 330 aa1.99□□□□□ -2.09
DEPDC4-205ENST00000548313 C1orf50Q9BV19 199 aa1.99□□□□□ -2.09
DEPDC4-205ENST00000548313 FAM192AQ9GZU8 254 aa1.99□□□□□ -2.09
DEPDC4-205ENST00000548313 LHX5Q9H2C1 402 aa1.99□□□□□ -2.09
DEPDC4-205ENST00000548313 SAR1BQ9Y6B6 198 aa1.99□□□□□ -2.09
DEPDC4-205ENST00000548313 TSPOAP1O95153 1857 aa1.99□□□□□ -2.09
DEPDC4-205ENST00000548313 SHANK1Q9Y566 2161 aa1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 KIR2DS1A0A191URI9 304 aa1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 KBTBD11-OT1A0A1B0GTJ5 212 aa1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 OR2AG2A6NM03 316 aa1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 VGLL3A8MV65 326 aa1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 SLC9A3R1O14745 358 aaPredicted RBP1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 RAD1O60671 282 aa1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 CDH16O75309 829 aa1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 GATBO75879 557 aaKnown RBP1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 CD160O95971 181 aa1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 MT-ND4P03905 459 aa1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 GLAP06280 429 aa1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 USF1P22415 310 aaPredicted RBP1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 STOMP27105 288 aa1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 MPV17P39210 176 aa1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 UQCRFS1P47985 274 aa1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 TAS2R46P59540 309 aa1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 RPS15P62841 145 aaKnown RBP1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 IL15RAQ13261 267 aa1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 MAD2L1BPQ15013 274 aaPredicted RBP1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 SLC25A35Q3KQZ1 300 aa1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 ALKBH6Q3KRA9 238 aa1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 CD300LGQ6UXG3 332 aa1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 RTL4Q6ZR62 310 aa1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 SSX9Q7RTT3 188 aa1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 LUZP2Q86TE4 346 aa1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 LRP11Q86VZ4 500 aa1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 GABRG1Q8N1C3 465 aa1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 GPR26Q8NDV2 337 aa1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 TSEN15Q8WW01 171 aaKnown RBP1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 N4BP2L2Q92802 583 aaPredicted RBP1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 CDX2Q99626 313 aaPredicted RBP1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 CALN1Q9BXU9 219 aa1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 RRAGDQ9NQL2 400 aaPredicted RBP1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 DHCR7Q9UBM7 475 aaKnown RBP1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 CLN8Q9UBY8 286 aa1.98□□□□□ -2.09
DEPDC4-205ENST00000548313 TSPAN11A1L157 253 aa1.97□□□□□ -2.09
DEPDC4-205ENST00000548313 NMT2O60551 498 aa1.97□□□□□ -2.09
DEPDC4-205ENST00000548313 ERLIN1O75477 346 aa1.97□□□□□ -2.09
DEPDC4-205ENST00000548313 CLTAP09496 248 aa1.97□□□□□ -2.09
DEPDC4-205ENST00000548313 PGA5P0DJD9 388 aa1.97□□□□□ -2.09
DEPDC4-205ENST00000548313 CTRB1P17538 263 aa1.97□□□□□ -2.09
DEPDC4-205ENST00000548313 HMOX2P30519 316 aa1.97□□□□□ -2.09
DEPDC4-205ENST00000548313 TGFBR1P36897 503 aa1.97□□□□□ -2.09
DEPDC4-205ENST00000548313 RPS11P62280 158 aaKnown RBP eCLIP1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms