RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 ALKBH6Q3KRA9 238 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 CDONQ4KMG0 1287 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 TMEM255AQ5JRV8 349 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 GLYATL3Q5SZD4 288 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 LIPNQ5VXI9 398 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 FBXW12Q6X9E4 464 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 AHSA2Q719I0 299 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 FAM220AQ7Z4H9 259 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 ZNF540Q8NDQ6 660 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 OR52H1Q8NGJ2 320 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 OR2AE1Q8NHA4 323 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 NINJ1Q92982 152 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 TMEM80Q96HE8 168 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 ZNF649Q9BS31 505 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 JAM3Q9BX67 310 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 CACNG6Q9BXT2 260 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 OR10A2Q9H208 303 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 CXorf56Q9H5V9 222 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 SCN3BQ9NY72 215 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 TAAR3PQ9P1P4 343 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 ZNF319Q9P2F9 582 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 DIMT1Q9UNQ2 313 aaKnown RBP11.67□□□□□ -0.54
SP140-213ENST00000543928 PCDHGB5Q9Y5G0 923 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 R4GMQ9 66 aa11.67□□□□□ -0.54
SP140-213ENST00000543928 ACOD1A6NK06 481 aa11.66□□□□□ -0.54
SP140-213ENST00000543928 CYSRT1A8MQ03 144 aa11.66□□□□□ -0.54
SP140-213ENST00000543928 LOC110117498-PIK3R3F6TDL0 507 aa11.66□□□□□ -0.54
SP140-213ENST00000543928 M0R233 179 aa11.66□□□□□ -0.54
SP140-213ENST00000543928 OVOL3O00110 214 aa11.66□□□□□ -0.54
SP140-213ENST00000543928 XRCC2O43543 280 aa11.66□□□□□ -0.54
SP140-213ENST00000543928 SRSF10O75494 262 aaKnown RBP11.66□□□□□ -0.54
SP140-213ENST00000543928 LIMS3P0CW19 117 aa11.66□□□□□ -0.54
SP140-213ENST00000543928 LIMS4P0CW20 117 aa11.66□□□□□ -0.54
SP140-213ENST00000543928 MYL12AP19105 171 aa11.66□□□□□ -0.54
SP140-213ENST00000543928 ALDH3B1P43353 468 aa11.66□□□□□ -0.54
SP140-213ENST00000543928 MMP16P51512 607 aa11.66□□□□□ -0.54
SP140-213ENST00000543928 PRSS12P56730 875 aa11.66□□□□□ -0.54
SP140-213ENST00000543928 MVKQ03426 396 aa11.66□□□□□ -0.54
SP140-213ENST00000543928 ZNF92Q03936 586 aa11.66□□□□□ -0.54
SP140-213ENST00000543928 TIGD6Q17RP2 521 aa11.66□□□□□ -0.54
SP140-213ENST00000543928 NKPD1Q17RQ9 610 aa11.66□□□□□ -0.54
SP140-213ENST00000543928 GFOD2Q3B7J2 385 aa11.66□□□□□ -0.54
SP140-213ENST00000543928 PGAP1Q75T13 922 aa11.66□□□□□ -0.54
SP140-213ENST00000543928 MRPL21Q7Z2W9 205 aaKnown RBP11.66□□□□□ -0.54
SP140-213ENST00000543928 KCTD20Q7Z5Y7 419 aa11.66□□□□□ -0.54
SP140-213ENST00000543928 OR8B12Q8NGG6 310 aa11.66□□□□□ -0.54
SP140-213ENST00000543928 SGK3Q96BR1 496 aa11.66□□□□□ -0.54
SP140-213ENST00000543928 HAVCR1Q96D42 359 aa11.66□□□□□ -0.54
SP140-213ENST00000543928 MRPL48Q96GC5 212 aaKnown RBP11.66□□□□□ -0.54
SP140-213ENST00000543928 C4orf36Q96KX1 117 aa11.66□□□□□ -0.54
SP140-213ENST00000543928 MYCBPQ99417 103 aaPredicted RBP11.66□□□□□ -0.54
SP140-213ENST00000543928 PBOV1Q9GZY1 135 aa11.66□□□□□ -0.54
SP140-213ENST00000543928 DYNLRB1Q9NP97 96 aa11.66□□□□□ -0.54
SP140-213ENST00000543928 ACOXLQ9NUZ1 547 aa11.66□□□□□ -0.54
SP140-213ENST00000543928 FKBP14Q9NWM8 211 aa11.66□□□□□ -0.54
SP140-213ENST00000543928 PURGQ9UJV8 347 aaKnown RBP11.66□□□□□ -0.54
SP140-213ENST00000543928 GTF2A1LQ9UNN4 478 aa11.66□□□□□ -0.54
SP140-213ENST00000543928 PMF1-BGLAPU3KQ54 211 aa11.66□□□□□ -0.54
SP140-213ENST00000543928 PDZD2O15018 2839 aa11.65□□□□□ -0.54
SP140-213ENST00000543928 ARID1AO14497 2285 aa11.65□□□□□ -0.54
SP140-213ENST00000543928 PTGES3LE9PB15 166 aa11.65□□□□□ -0.54
SP140-213ENST00000543928 J3QLW9 94 aa11.65□□□□□ -0.54
SP140-213ENST00000543928 TIMM8AO60220 97 aaPredicted RBP11.65□□□□□ -0.54
SP140-213ENST00000543928 TACSTD2P09758 323 aa11.65□□□□□ -0.54
SP140-213ENST00000543928 CCDC159P0C7I6 412 aa11.65□□□□□ -0.54
SP140-213ENST00000543928 ZNF19P17023 458 aa11.65□□□□□ -0.54
SP140-213ENST00000543928 KITLGP21583 273 aa11.65□□□□□ -0.54
SP140-213ENST00000543928 PSMB10P40306 273 aa11.65□□□□□ -0.54
SP140-213ENST00000543928 ETV1P50549 477 aa11.65□□□□□ -0.54
SP140-213ENST00000543928 MOGQ16653 247 aa11.65□□□□□ -0.54
SP140-213ENST00000543928 DEFB113Q30KQ7 82 aa11.65□□□□□ -0.54
SP140-213ENST00000543928 BCL2L15Q5TBC7 163 aa11.65□□□□□ -0.54
SP140-213ENST00000543928 OR2T2Q6IF00 324 aa11.65□□□□□ -0.54
SP140-213ENST00000543928 SYS1Q8N2H4 156 aa11.65□□□□□ -0.54
SP140-213ENST00000543928 ZNF786Q8N393 782 aa11.65□□□□□ -0.54
SP140-213ENST00000543928 STX19Q8N4C7 294 aa11.65□□□□□ -0.54
SP140-213ENST00000543928 RORBQ92753 470 aa11.65□□□□□ -0.54
SP140-213ENST00000543928 PPP1R14AQ96A00 147 aa11.65□□□□□ -0.54
SP140-213ENST00000543928 SPSB4Q96A44 273 aa11.65□□□□□ -0.54
SP140-213ENST00000543928 REEP6Q96HR9 211 aa11.65□□□□□ -0.54
SP140-213ENST00000543928 SIGLEC11Q96RL6 698 aa11.65□□□□□ -0.54
SP140-213ENST00000543928 VRK1Q99986 396 aaPredicted RBP11.65□□□□□ -0.54
SP140-213ENST00000543928 REPIN1Q9BWE0 567 aaKnown RBP11.65□□□□□ -0.54
SP140-213ENST00000543928 MOB1AQ9H8S9 216 aa11.65□□□□□ -0.54
SP140-213ENST00000543928 ISG20L2Q9H9L3 353 aaKnown RBP11.65□□□□□ -0.54
SP140-213ENST00000543928 G6PC2Q9NQR9 355 aa11.65□□□□□ -0.54
SP140-213ENST00000543928 BEX4Q9NWD9 120 aaPredicted RBP11.65□□□□□ -0.54
SP140-213ENST00000543928 UBAP1Q9NZ09 502 aa11.65□□□□□ -0.54
SP140-213ENST00000543928 NUFIP1Q9UHK0 495 aaKnown RBP11.65□□□□□ -0.54
SP140-213ENST00000543928 GPR160Q9UJ42 338 aa11.65□□□□□ -0.54
SP140-213ENST00000543928 FBXO9Q9UK97 447 aaPredicted RBP11.65□□□□□ -0.54
SP140-213ENST00000543928 OR52A1Q9UKL2 312 aa11.65□□□□□ -0.54
SP140-213ENST00000543928 EXOSC1Q9Y3B2 195 aaKnown RBP11.65□□□□□ -0.54
SP140-213ENST00000543928 TPRKBQ9Y3C4 175 aa11.65□□□□□ -0.54
SP140-213ENST00000543928 SNX5Q9Y5X3 404 aa11.65□□□□□ -0.54
SP140-213ENST00000543928 CSMD2Q7Z408 3487 aa11.65□□□□□ -0.55
SP140-213ENST00000543928 H7C417 338 aa11.64□□□□□ -0.55
SP140-213ENST00000543928 NAT2P11245 290 aa11.64□□□□□ -0.55
SP140-213ENST00000543928 SELEP16581 610 aa11.64□□□□□ -0.55
SP140-213ENST00000543928 C21orf33P30042 268 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms