RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 MYL12BO14950 172 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 SPRY3O43610 288 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 SSX4O60224 188 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 ICMTO60725 284 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 SULT1C4O75897 302 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 CD8AP01732 235 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 IGHV3-13P01766 116 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 RAC2P15153 192 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 TNFSF4P23510 183 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 EEF1B2P24534 225 aaKnown RBP5.41□□□□□ -1.54
LTBR-212ENST00000543542 DCKP27707 260 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 OTX1P32242 354 aaPredicted RBP5.41□□□□□ -1.54
LTBR-212ENST00000543542 DCTDP32321 178 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 GNALP38405 381 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 LIPAP38571 399 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 PSMB10P40306 273 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 PTH2RP49190 550 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 PPOXP50336 477 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 ZNF81P51508 661 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 GBX2P52951 348 aaPredicted RBP5.41□□□□□ -1.54
LTBR-212ENST00000543542 ART1P52961 327 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 PRSS12P56730 875 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 ROM1Q03395 351 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 ZNF92Q03936 586 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 ST3GAL4Q11206 333 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 GALEQ14376 348 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 GK2Q14410 553 aaPredicted RBP5.41□□□□□ -1.54
LTBR-212ENST00000543542 TSTQ16762 297 aaKnown RBP5.41□□□□□ -1.54
LTBR-212ENST00000543542 MSMPQ1L6U9 139 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 SWI5Q1ZZU3 235 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 KRTAP27-1Q3LI81 207 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 C6orf141Q5SZD1 244 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 LIPNQ5VXI9 398 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 FBXW12Q6X9E4 464 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 KCTD20Q7Z5Y7 419 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 ZCCHC24Q8N2G6 241 aaKnown RBP5.41□□□□□ -1.54
LTBR-212ENST00000543542 ZNF786Q8N393 782 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 OR8B12Q8NGG6 310 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 GGHQ92820 318 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 MYDGFQ969H8 173 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 HAVCR1Q96D42 359 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 FAM71F1Q96KD3 344 aaPredicted RBP5.41□□□□□ -1.54
LTBR-212ENST00000543542 SIGLEC11Q96RL6 698 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 PBOV1Q9GZY1 135 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 OPA3Q9H6K4 179 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 MOB1AQ9H8S9 216 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 BARX1Q9HBU1 254 aaPredicted RBP5.41□□□□□ -1.54
LTBR-212ENST00000543542 FGF20Q9NP95 211 aaPredicted RBP5.41□□□□□ -1.54
LTBR-212ENST00000543542 ACOXLQ9NUZ1 547 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 TMEM100Q9NV29 134 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 ERVK13-1Q9NX77 482 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 CNOT2Q9NZN8 540 aaKnown RBP5.41□□□□□ -1.54
LTBR-212ENST00000543542 CGGBP1Q9UFW8 167 aaPredicted RBP5.41□□□□□ -1.54
LTBR-212ENST00000543542 MRM2Q9UI43 246 aaKnown RBP5.41□□□□□ -1.54
LTBR-212ENST00000543542 OR52A1Q9UKL2 312 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 BLOC1S6Q9UL45 172 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 SNX5Q9Y5X3 404 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 TACC2O95359 2948 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 SPTAN1Q13813 2472 aaKnown RBP5.41□□□□□ -1.54
LTBR-212ENST00000543542 ASH1LQ9NR48 2969 aaKnown RBP5.41□□□□□ -1.54
LTBR-212ENST00000543542 HECTD1Q9ULT8 2610 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 FBN2P35556 2912 aa5.41□□□□□ -1.54
LTBR-212ENST00000543542 CACNA1DQ01668 2161 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 PTPN13Q12923 2485 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 IGLV3-9A0A075B6K5 115 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.4□□□□□ -1.54
LTBR-212ENST00000543542 A0A1B0GVI7 797 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 TMEM129A0AVI4 362 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 ACOD1A6NK06 481 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 C17orf100A8MU93 164 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 PRR32B1ATL7 298 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 H3BSH0 61 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 H7C417 338 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 P2RY10O00398 339 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 MTRF1O75570 445 aaKnown RBP5.4□□□□□ -1.54
LTBR-212ENST00000543542 IGHA1P01876 353 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 PIPP12273 146 aaPredicted RBP5.4□□□□□ -1.54
LTBR-212ENST00000543542 KITLGP21583 273 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 MAP2K3P46734 347 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 ETV1P50549 477 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 MMP16P51512 607 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 OR12D2P58182 307 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 CCL8P80075 99 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 MFGE8Q08431 387 aaPredicted RBP5.4□□□□□ -1.54
LTBR-212ENST00000543542 MRPL28Q13084 256 aaKnown RBP5.4□□□□□ -1.54
LTBR-212ENST00000543542 OR8G1Q15617 311 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 MST1LQ2TV78 715 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 PCGF3Q3KNV8 242 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 CDONQ4KMG0 1287 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 RBM48Q5RL73 367 aaKnown RBP5.4□□□□□ -1.54
LTBR-212ENST00000543542 C11orf71Q6IPW1 123 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 COLCA1Q6ZS62 124 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 SYS1Q8N2H4 156 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 FTMTQ8N4E7 242 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 ZNF676Q8N7Q3 588 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 OR8G5Q8NG78 346 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 OR2Z1Q8NG97 314 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 OR13G1Q8NGZ3 307 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 OR51E1Q8TCB6 317 aa5.4□□□□□ -1.54
LTBR-212ENST00000543542 NEU4Q8WWR8 484 aaPredicted RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms