RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 VAMP3Q15836 100 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 GABRA6Q16445 453 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 RPEL1Q2QD12 228 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 C2CD6Q53TS8 623 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 VAX1Q5SQQ9 334 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 TIGD3Q6B0B8 471 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 UGT2A3Q6UWM9 527 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 IZUMO2Q6UXV1 221 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 DNM1P46Q6ZS02 220 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 NDUFAF7Q7L592 441 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 PID1Q7Z2X4 250 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 NT5DC3Q86UY8 548 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 C17orf82Q86X59 251 aaPredicted RBP3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 ZNF547Q8IVP9 402 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 KLHDC8BQ8IXV7 354 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 CCNYL1Q8N7R7 359 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 ZNF557Q8N988 423 aaPredicted RBP3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 ZNF565Q8N9K5 539 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 LHFPL5Q8TAF8 219 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 DDI1Q8WTU0 396 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 ITCHQ96J02 903 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 MAGEB18Q96M61 343 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 TSSK3Q96PN8 268 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 TRNT1Q96Q11 434 aaKnown RBP3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 RARRES2Q99969 163 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 PELOQ9BRX2 385 aaKnown RBP3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 C9orf16Q9BUW7 83 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 CHID1Q9BWS9 393 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 OR51B5Q9H339 312 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 C11orf49Q9H6J7 331 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 MRM3Q9HC36 420 aaKnown RBP3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 SLCO1B3Q9NPD5 702 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 NRBP2Q9NSY0 501 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 DHRS4-AS1Q9P1J3 65 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 STX18Q9P2W9 335 aaKnown RBP3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 LGALS13Q9UHV8 139 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 ZNF229Q9UJW7 825 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 UBQLN1Q9UMX0 589 aaKnown RBP3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 ING4Q9UNL4 249 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 RCL1Q9Y2P8 373 aaKnown RBP3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 UTP11Q9Y3A2 253 aaKnown RBP3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 V9GY05 133 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 BAHCC1Q9P281 2608 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 IGSF9BQ9UPX0 1349 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 LRRC37AA6NMS7 1700 aa3.07□□□□□ -1.92
SFSWAP-211ENST00000542813 TRAV9-2A0A087WT02 112 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 TRPC5OSA6NMA1 111 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 IQCF5A8MTL0 148 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 KPNA4O00629 521 aaPredicted RBP3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 CDX4O14627 284 aaPredicted RBP3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 SCAMP2O15127 329 aaKnown RBP3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 RAD51BO15315 384 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 GMDSO60547 372 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 CCDC22O60826 627 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 EDF1O60869 148 aaKnown RBP3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 CLDN11O75508 207 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 KBTBD11O94819 623 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 ASS1P00966 412 aaKnown RBP3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 SLC35E2P0CK97 266 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 TCN1P20061 433 aaPredicted RBP3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 OR1E1P30953 314 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 AQP2P41181 271 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 MARCKSL1P49006 195 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 HCAR3P49019 387 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 GDI2P50395 445 aaKnown RBP3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 ERFP50548 548 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 IFITM2Q01629 132 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 ECH1Q13011 328 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 PSMD5Q16401 504 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 AANATQ16613 207 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 QRICH1Q2TAL8 776 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 C18orf21Q32NC0 220 aaPredicted RBP3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 TRMT5Q32P41 509 aaKnown RBP3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 TMEM30BQ3MIR4 351 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 ANKRD36CQ5JPF3 1778 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 RUSC1-AS1Q66K80 236 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 C11orf71Q6IPW1 123 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 C1orf94Q6P1W5 598 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 SLC35D2Q76EJ3 337 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 ZNF571Q7Z3V5 609 aaPredicted RBP3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 CROCCP2Q86T23 111 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 STX12Q86Y82 276 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 ERO1BQ86YB8 467 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 PRELID2Q8N945 189 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 ZNF680Q8NEM1 530 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 OR4D6Q8NGJ1 314 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 SPATA3Q8NHX4 192 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 NUBPLQ8TB37 319 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 TEX47Q8TBZ9 253 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 CHCHD10Q8WYQ3 142 aaPredicted RBP3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 DUS3LQ96G46 650 aaKnown RBP3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 RMND5BQ96G75 393 aaPredicted RBP3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 OR5B12Q96R08 314 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 RANBP9Q96S59 729 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 NAT9Q9BTE0 207 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 MRPS26Q9BYN8 205 aaKnown RBP3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 SELENOIQ9C0D9 397 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 C6orf62Q9GZU0 229 aaPredicted RBP3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 DEFB129Q9H1M3 183 aa3.06□□□□□ -1.92
SFSWAP-211ENST00000542813 LHX5Q9H2C1 402 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms