RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 SPAG16Q8N0X2 631 aa13.66□□□□□ -0.22
CNOT9-208ENST00000542068 NUBPLQ8TB37 319 aa13.66□□□□□ -0.22
CNOT9-208ENST00000542068 ST6GALNAC5Q9BVH7 336 aa13.66□□□□□ -0.22
CNOT9-208ENST00000542068 SMIM3Q9BZL3 60 aa13.66□□□□□ -0.22
CNOT9-208ENST00000542068 DUSP15Q9H1R2 295 aaPredicted RBP13.66□□□□□ -0.22
CNOT9-208ENST00000542068 LANCL2Q9NS86 450 aa13.66□□□□□ -0.22
CNOT9-208ENST00000542068 SLC5A6Q9Y289 635 aa13.66□□□□□ -0.22
CNOT9-208ENST00000542068 IGLV1-36A0A0B4J1U3 117 aa13.65□□□□□ -0.22
CNOT9-208ENST00000542068 NPIPA5E9PKD4 350 aa13.65□□□□□ -0.22
CNOT9-208ENST00000542068 RAB27BO00194 218 aa13.65□□□□□ -0.22
CNOT9-208ENST00000542068 SERPINA5P05154 406 aa13.65□□□□□ -0.22
CNOT9-208ENST00000542068 FNDC7Q5VTL7 733 aa13.65□□□□□ -0.22
CNOT9-208ENST00000542068 SYT13Q7L8C5 426 aa13.65□□□□□ -0.22
CNOT9-208ENST00000542068 SLC25A42Q86VD7 318 aa13.65□□□□□ -0.22
CNOT9-208ENST00000542068 OR4K15Q8NH41 348 aa13.65□□□□□ -0.22
CNOT9-208ENST00000542068 ASB17Q8WXJ9 295 aa13.65□□□□□ -0.22
CNOT9-208ENST00000542068 FBXO17Q96EF6 278 aa13.65□□□□□ -0.22
CNOT9-208ENST00000542068 ADAT3Q96EY9 351 aaPredicted RBP13.65□□□□□ -0.22
CNOT9-208ENST00000542068 ACKR4Q9NPB9 350 aa13.65□□□□□ -0.22
CNOT9-208ENST00000542068 NPIPA1Q9UND3 350 aa13.65□□□□□ -0.22
CNOT9-208ENST00000542068 SYT7O43581 403 aa13.65□□□□□ -0.22
CNOT9-208ENST00000542068 ABOP16442 354 aa13.65□□□□□ -0.22
CNOT9-208ENST00000542068 UNC119Q13432 240 aa13.65□□□□□ -0.22
CNOT9-208ENST00000542068 PLXDC1Q8IUK5 500 aa13.65□□□□□ -0.22
CNOT9-208ENST00000542068 CNTNAP3BQ96NU0 1288 aa13.65□□□□□ -0.22
CNOT9-208ENST00000542068 RPH3AQ9Y2J0 694 aaPredicted RBP13.65□□□□□ -0.22
CNOT9-208ENST00000542068 FREM2Q5SZK8 3169 aa13.65□□□□□ -0.22
CNOT9-208ENST00000542068 RALGAPA1Q6GYQ0 2036 aa13.65□□□□□ -0.22
CNOT9-208ENST00000542068 A0A1B0GV50 99 aa13.65□□□□□ -0.23
CNOT9-208ENST00000542068 NDUFA2O43678 99 aa13.65□□□□□ -0.23
CNOT9-208ENST00000542068 DHPSP49366 369 aaPredicted RBP13.65□□□□□ -0.23
CNOT9-208ENST00000542068 EFNA3P52797 238 aa13.65□□□□□ -0.23
CNOT9-208ENST00000542068 EMP2P54851 167 aa13.65□□□□□ -0.23
CNOT9-208ENST00000542068 TOMM20Q15388 145 aa13.65□□□□□ -0.23
CNOT9-208ENST00000542068 ELAVL1Q15717 326 aaKnown RBP13.65□□□□□ -0.23
CNOT9-208ENST00000542068 OR51F2Q8NH61 342 aa13.65□□□□□ -0.23
CNOT9-208ENST00000542068 FAM71F1Q96KD3 344 aaPredicted RBP13.65□□□□□ -0.23
CNOT9-208ENST00000542068 JSRP1Q96MG2 331 aaPredicted RBP13.65□□□□□ -0.23
CNOT9-208ENST00000542068 GPER1Q99527 375 aa13.65□□□□□ -0.23
CNOT9-208ENST00000542068 WWTR1Q9GZV5 400 aa13.65□□□□□ -0.23
CNOT9-208ENST00000542068 R4GMQ9 66 aa13.65□□□□□ -0.23
CNOT9-208ENST00000542068 RP1L1Q8IWN7 2480 aaPredicted RBP13.64□□□□□ -0.23
CNOT9-208ENST00000542068 A0A1B0GTQ1 180 aa13.64□□□□□ -0.23
CNOT9-208ENST00000542068 KNG1P01042 644 aa13.64□□□□□ -0.23
CNOT9-208ENST00000542068 HEXBP07686 556 aa13.64□□□□□ -0.23
CNOT9-208ENST00000542068 SPP1P10451 314 aa13.64□□□□□ -0.23
CNOT9-208ENST00000542068 TDGQ13569 410 aa13.64□□□□□ -0.23
CNOT9-208ENST00000542068 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.64□□□□□ -0.23
CNOT9-208ENST00000542068 CLEC9AQ6UXN8 241 aa13.64□□□□□ -0.23
CNOT9-208ENST00000542068 SLC26A10Q8NG04 563 aa13.64□□□□□ -0.23
CNOT9-208ENST00000542068 ZC3H10Q96K80 434 aaKnown RBP13.64□□□□□ -0.23
CNOT9-208ENST00000542068 TXNIPQ9H3M7 391 aa13.64□□□□□ -0.23
CNOT9-208ENST00000542068 ESRP2Q9H6T0 727 aaKnown RBP13.64□□□□□ -0.23
CNOT9-208ENST00000542068 FN3KRPQ9HA64 309 aa13.64□□□□□ -0.23
CNOT9-208ENST00000542068 SLC22A11Q9NSA0 550 aa13.64□□□□□ -0.23
CNOT9-208ENST00000542068 OR5AC2Q9NZP5 309 aa13.64□□□□□ -0.23
CNOT9-208ENST00000542068 LMO7DNF2Z398 122 aa13.64□□□□□ -0.23
CNOT9-208ENST00000542068 G3V3Y1 287 aa13.64□□□□□ -0.23
CNOT9-208ENST00000542068 EFSO43281 561 aa13.64□□□□□ -0.23
CNOT9-208ENST00000542068 DDAH2O95865 285 aa13.64□□□□□ -0.23
CNOT9-208ENST00000542068 VSIG8P0DPA2 414 aa13.64□□□□□ -0.23
CNOT9-208ENST00000542068 PDZK1IP1Q13113 114 aa13.64□□□□□ -0.23
CNOT9-208ENST00000542068 ARFRP1Q13795 201 aa13.64□□□□□ -0.23
CNOT9-208ENST00000542068 MEF2DQ14814 521 aa13.64□□□□□ -0.23
CNOT9-208ENST00000542068 TEX30Q5JUR7 227 aa13.64□□□□□ -0.23
CNOT9-208ENST00000542068 PRAMEF20Q5VT98 475 aa13.64□□□□□ -0.23
CNOT9-208ENST00000542068 NUP54Q7Z3B4 507 aa13.64□□□□□ -0.23
CNOT9-208ENST00000542068 BAP18Q8IXM2 172 aa13.64□□□□□ -0.23
CNOT9-208ENST00000542068 ZSCAN4Q8NAM6 433 aaPredicted RBP13.64□□□□□ -0.23
CNOT9-208ENST00000542068 TMEM104Q8NE00 496 aa13.64□□□□□ -0.23
CNOT9-208ENST00000542068 STT3BQ8TCJ2 826 aa13.64□□□□□ -0.23
CNOT9-208ENST00000542068 ZNF721Q8TF20 911 aa13.64□□□□□ -0.23
CNOT9-208ENST00000542068 ARL11Q969Q4 196 aa13.64□□□□□ -0.23
CNOT9-208ENST00000542068 ZNF775Q96BV0 537 aaPredicted RBP13.64□□□□□ -0.23
CNOT9-208ENST00000542068 CRB3Q9BUF7 120 aa13.64□□□□□ -0.23
CNOT9-208ENST00000542068 SCPEP1Q9HB40 452 aa13.64□□□□□ -0.23
CNOT9-208ENST00000542068 ELL3Q9HB65 397 aaPredicted RBP13.64□□□□□ -0.23
CNOT9-208ENST00000542068 H0YIZ8 118 aa13.63□□□□□ -0.23
CNOT9-208ENST00000542068 TPT1P13693 172 aaKnown RBP13.63□□□□□ -0.23
CNOT9-208ENST00000542068 RCC1P18754 421 aaPredicted RBP13.63□□□□□ -0.23
CNOT9-208ENST00000542068 TLE3Q04726 772 aa13.63□□□□□ -0.23
CNOT9-208ENST00000542068 SGCAQ16586 387 aa13.63□□□□□ -0.23
CNOT9-208ENST00000542068 RSPO4Q2I0M5 234 aaPredicted RBP13.63□□□□□ -0.23
CNOT9-208ENST00000542068 ZNF260Q3ZCT1 412 aa13.63□□□□□ -0.23
CNOT9-208ENST00000542068 PAQR4Q8N4S7 273 aaPredicted RBP13.63□□□□□ -0.23
CNOT9-208ENST00000542068 OR10H5Q8NGA6 315 aa13.63□□□□□ -0.23
CNOT9-208ENST00000542068 OR51E1Q8TCB6 317 aa13.63□□□□□ -0.23
CNOT9-208ENST00000542068 ADAMTS18Q8TE60 1221 aa13.63□□□□□ -0.23
CNOT9-208ENST00000542068 MITD1Q8WV92 249 aa13.63□□□□□ -0.23
CNOT9-208ENST00000542068 USB1Q9BQ65 265 aaKnown RBP13.63□□□□□ -0.23
CNOT9-208ENST00000542068 MTCH2Q9Y6C9 303 aa13.63□□□□□ -0.23
CNOT9-208ENST00000542068 IGHV1OR21-1A0A087WYE8 117 aa13.63□□□□□ -0.23
CNOT9-208ENST00000542068 SOCS1O15524 211 aa13.63□□□□□ -0.23
CNOT9-208ENST00000542068 CRYBA1P05813 215 aa13.63□□□□□ -0.23
CNOT9-208ENST00000542068 CRHP06850 196 aa13.63□□□□□ -0.23
CNOT9-208ENST00000542068 PNLIPRP2P54317 469 aa13.63□□□□□ -0.23
CNOT9-208ENST00000542068 SCAND1P57086 179 aa13.63□□□□□ -0.23
CNOT9-208ENST00000542068 SGCBQ16585 318 aa13.63□□□□□ -0.23
CNOT9-208ENST00000542068 PIK3IP1Q96FE7 263 aa13.63□□□□□ -0.23
CNOT9-208ENST00000542068 OR6C1Q96RD1 312 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms